Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0826
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         25   3.6  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   3.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.3  

>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 133 LISGESGGTQCSGT 92
           +ISGE  GT C+GT
Sbjct: 184 IISGERDGTMCTGT 197


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 471  LLMFSAQSPFVHSLTFFE 418
            LLMF + SP+V S  FFE
Sbjct: 1426 LLMFLSFSPYVSSSAFFE 1443


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 297 VMIRLRRRSRDVTPVRFRGAYINSRQVI 214
           VMI   RR     P+R  G  I S+Q I
Sbjct: 707 VMISSLRRGHPEIPIRVGGLEIRSKQAI 734


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,242
Number of Sequences: 2352
Number of extensions: 15740
Number of successful extensions: 72
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)