Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0826
         (800 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81498-2|CAB04085.1|  760|Caenorhabditis elegans Hypothetical pr...    32   0.55 
Z81498-1|CAB04086.1|  692|Caenorhabditis elegans Hypothetical pr...    32   0.55 
U12682-1|AAB63525.1|  692|Caenorhabditis elegans celfurPC protei...    32   0.55 
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U41559-5|AAC24258.1|  217|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z69790-1|CAA93654.2|  427|Caenorhabditis elegans Hypothetical pr...    28   6.8  

>Z81498-2|CAB04085.1|  760|Caenorhabditis elegans Hypothetical
           protein F11A6.1b protein.
          Length = 760

 Score = 31.9 bits (69), Expect = 0.55
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
 Frame = +1

Query: 208 ENYYLSRINISSAKTDGGNISTAAPQSDHYKDLIKIE--IAMRRVEENSRRLKEYT 369
           + YYL R +   +++     S +A Q  H +D++ +E  +A RRV+   RR++ +T
Sbjct: 93  DEYYLFRDDRKKSRSSRKTRSLSANQLQHEEDVMWMEQQVAKRRVKRGYRRIRRHT 148


>Z81498-1|CAB04086.1|  692|Caenorhabditis elegans Hypothetical
           protein F11A6.1a protein.
          Length = 692

 Score = 31.9 bits (69), Expect = 0.55
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
 Frame = +1

Query: 208 ENYYLSRINISSAKTDGGNISTAAPQSDHYKDLIKIE--IAMRRVEENSRRLKEYT 369
           + YYL R +   +++     S +A Q  H +D++ +E  +A RRV+   RR++ +T
Sbjct: 93  DEYYLFRDDRKKSRSSRKTRSLSANQLQHEEDVMWMEQQVAKRRVKRGYRRIRRHT 148


>U12682-1|AAB63525.1|  692|Caenorhabditis elegans celfurPC protein
           protein.
          Length = 692

 Score = 31.9 bits (69), Expect = 0.55
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
 Frame = +1

Query: 208 ENYYLSRINISSAKTDGGNISTAAPQSDHYKDLIKIE--IAMRRVEENSRRLKEYT 369
           + YYL R +   +++     S +A Q  H +D++ +E  +A RRV+   RR++ +T
Sbjct: 93  DEYYLFRDDRKKSRSSRKTRSLSANQLQHEEDVMWMEQQVAKRRVKRGYRRIRRHT 148


>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical protein
            F48F5.1 protein.
          Length = 1291

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 18/71 (25%), Positives = 34/71 (47%)
 Frame = +1

Query: 310  KIEIAMRRVEENSRRLKEYTKSILWDNKDKSLWCVLFKESERMDKGRLGGKHQQSVDEEY 489
            +IE+  R+ EEN +R+     ++    K+KS    +  E  + +K  L  K +   ++  
Sbjct: 798  EIEMEARQAEENEQRIAAEKNALEAKIKEKSNMRKVVDEQNQREKDELQAKLRADQEKSE 857

Query: 490  IRSLREQKMRE 522
             R + E+K  E
Sbjct: 858  ARKIAEKKKDE 868


>U41559-5|AAC24258.1|  217|Caenorhabditis elegans Hypothetical
           protein C26B2.2 protein.
          Length = 217

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 583 SEVNPVFGGDASHDALDVSKPPSFFVPLNFVYT 485
           S++N +FG D +  A     PP+ +V L  +Y+
Sbjct: 133 SQINKIFGRDYNPPAPSSKSPPTIYVNLGVIYS 165


>Z69790-1|CAA93654.2|  427|Caenorhabditis elegans Hypothetical
           protein F33C8.2 protein.
          Length = 427

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 301 DLIKIEIAMRRVEENSRRLKEYTKSILWDNKDKSLWCV 414
           D  K+E+   RVE   + L E T+S  ++   K LW +
Sbjct: 268 DAPKLEVNALRVEVAEQNLPETTRSAFFEKLQKMLWAM 305


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,289,843
Number of Sequences: 27780
Number of extensions: 352102
Number of successful extensions: 885
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)