Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0822
(664 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 284 9e-78
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 147 1e-36
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 147 1e-36
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 146 2e-36
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 146 2e-36
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 93 4e-20
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 42 6e-05
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 42 1e-04
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 40 3e-04
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 1.8
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 26 5.6
SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po... 25 9.7
SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomy... 25 9.7
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 284 bits (696), Expect = 9e-78
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
Score = 284 bits (696), Expect = 9e-78
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229
Score = 284 bits (696), Expect = 9e-78
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KI DKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 272
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305
Score = 283 bits (693), Expect = 2e-77
Identities = 138/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KI DKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 348
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GG+
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 147 bits (356), Expect = 1e-36
Identities = 74/88 (84%), Positives = 79/88 (89%), Gaps = 1/88 (1%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 236 XQKESTLHLVLRLRGG-MQIFVKTLTGK 316
QKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 140 bits (338), Expect = 2e-34
Identities = 67/77 (87%), Positives = 71/77 (92%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
MQIFVKTLTGKTITLEVE+SDTI+NVK+KI DKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 464 IQKEXTLHXXXRLXGGM 514
IQKE TLH RL GG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 147 bits (356), Expect = 1e-36
Identities = 74/88 (84%), Positives = 79/88 (89%), Gaps = 1/88 (1%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 236 XQKESTLHLVLRLRGG-MQIFVKTLTGK 316
QKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 140 bits (338), Expect = 2e-34
Identities = 67/77 (87%), Positives = 71/77 (92%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
MQIFVKTLTGKTITLEVE+SDTI+NVK+KI DKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 464 IQKEXTLHXXXRLXGGM 514
IQKE TLH RL GG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 146 bits (354), Expect = 2e-36
Identities = 71/76 (93%), Positives = 73/76 (96%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 236 XQKESTLHLVLRLRGG 283
QKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 139 bits (337), Expect = 3e-34
Identities = 67/76 (88%), Positives = 70/76 (92%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
MQIFVKTLTGKTITLEVE+SDTI+NVK+KI DKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 464 IQKEXTLHXXXRLXGG 511
IQKE TLH RL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 146 bits (354), Expect = 2e-36
Identities = 71/76 (93%), Positives = 73/76 (96%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 236 XQKESTLHLVLRLRGG 283
QKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 139 bits (337), Expect = 3e-34
Identities = 67/76 (88%), Positives = 70/76 (92%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
MQIFVKTLTGKTITLEVE+SDTI+NVK+KI DKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 464 IQKEXTLHXXXRLXGG 511
IQKE TLH RL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 92.7 bits (220), Expect = 4e-20
Identities = 41/76 (53%), Positives = 56/76 (73%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
MLI VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 236 XQKESTLHLVLRLRGG 283
+ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 80.2 bits (189), Expect = 2e-16
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
M I VKTLTGK I L+++ +D + +K ++ +KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 464 IQKEXTLHXXXRLXGG 511
++ LH L GG
Sbjct: 61 LEGGSVLHLVLALRGG 76
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 42.3 bits (95), Expect = 6e-05
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +2
Query: 50 TTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 229
T + + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L
Sbjct: 2 TNISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKT 61
Query: 230 YNXQKESTLHLVLRL 274
Y Q ++HLV L
Sbjct: 62 YKIQDGHSIHLVKTL 76
Score = 38.7 bits (86), Expect = 7e-04
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 464 IQKEXTLH 487
IQ ++H
Sbjct: 64 IQDGHSIH 71
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 41.5 bits (93), Expect = 1e-04
Identities = 19/63 (30%), Positives = 36/63 (57%)
Frame = +2
Query: 59 LIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNX 238
L F K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YN
Sbjct: 3 LTFKNLQQQKFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNI 62
Query: 239 QKE 247
+++
Sbjct: 63 KEQ 65
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 39.9 bits (89), Expect = 3e-04
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 311 GKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEXTL 484
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2
Query: 83 GKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKESTL 256
GK LE+E ++T +K ++ +PP++Q++I G QL+D L + +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.5 bits (58), Expect = 1.8
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +2
Query: 62 IFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--YN 235
I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + ++
Sbjct: 6 IRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILHD 65
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTI 322
T HLV+ + + + T ++
Sbjct: 66 ATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 25.8 bits (54), Expect = 5.6
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 370 LGFHILNGVRCFNF*CDGFTGKCFHKDLHSTS 275
L +G + +N CD F GKCFHK +TS
Sbjct: 15 LSIGTFDGYKIYN--CDPF-GKCFHKIQGATS 43
>SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 635
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 372 ILAFTFSMVSDASTSSVMVLPVSVFT 295
ILAF F +T +V VLPVS F+
Sbjct: 182 ILAFGFVNSFSGATDTVRVLPVSQFS 207
>SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 25.0 bits (52), Expect = 9.7
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = +2
Query: 77 LTGKTITLEVEASDTIXNVKAKIQDKEGIP---PDQQRLIFAGKQLEDGRTLSDYNXQKE 247
L G T EV T+ + + +G P P + I A +G TL+ YN
Sbjct: 94 LKGPERTSEVSLPQTVNLSEISNNNDKGQPTNTPPVRSTIVAPSLYSEGSTLNHYNNGSH 153
Query: 248 STLH 259
LH
Sbjct: 154 QVLH 157
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,079,515
Number of Sequences: 5004
Number of extensions: 36358
Number of successful extensions: 133
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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