Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0822
(664 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 286 1e-77
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 286 1e-77
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 219 2e-57
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 1e-35
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 126 2e-29
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 87 2e-17
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 57 1e-08
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 53 2e-07
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 40 0.002
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.022
SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12) 36 0.039
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 36 0.039
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 34 0.12
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 31 0.84
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 31 0.84
SB_16942| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 30 1.5
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 28 7.8
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 286 bits (701), Expect = 1e-77
Identities = 142/153 (92%), Positives = 142/153 (92%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
Score = 286 bits (701), Expect = 1e-77
Identities = 142/153 (92%), Positives = 142/153 (92%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229
Score = 286 bits (701), Expect = 1e-77
Identities = 142/153 (92%), Positives = 142/153 (92%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 272
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305
Score = 286 bits (701), Expect = 1e-77
Identities = 142/153 (92%), Positives = 142/153 (92%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 348
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381
Score = 286 bits (701), Expect = 1e-77
Identities = 142/153 (92%), Positives = 142/153 (92%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 424
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 425 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457
Score = 284 bits (696), Expect = 5e-77
Identities = 141/152 (92%), Positives = 141/152 (92%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 500
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGG 511
FAGKQLEDGRTLSDYNIQKE TLH RL GG
Sbjct: 501 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 286 bits (701), Expect = 1e-77
Identities = 142/153 (92%), Positives = 142/153 (92%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
Score = 286 bits (701), Expect = 1e-77
Identities = 142/153 (92%), Positives = 142/153 (92%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229
Score = 286 bits (701), Expect = 1e-77
Identities = 142/153 (92%), Positives = 142/153 (92%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 272
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305
Score = 284 bits (696), Expect = 5e-77
Identities = 141/152 (92%), Positives = 141/152 (92%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 348
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGG 511
FAGKQLEDGRTLSDYNIQKE TLH RL GG
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 219 bits (535), Expect = 2e-57
Identities = 110/144 (76%), Positives = 123/144 (85%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQI VK KT TL+VEASDT+E+VK KI ++EGIPP QRL+
Sbjct: 61 IQKESTLHLVLRLRGGMQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLL 119
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLH 487
+ ++L D R+L+DYNI++ LH
Sbjct: 120 YEEEELVDNRSLADYNIKQGSILH 143
Score = 143 bits (346), Expect = 1e-34
Identities = 70/77 (90%), Positives = 70/77 (90%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
MQIFVKTLTGKTITLEVE SDTIENVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 464 IQKEXTLHXXXRLXGGM 514
IQKE TLH RL GGM
Sbjct: 61 IQKESTLHLVLRLRGGM 77
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/61 (57%), Positives = 48/61 (78%)
Frame = +2
Query: 86 KTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKESTLHLV 265
KT TL+VEASDT+ +VK KIQ++EGIPP QRL++ ++L D R+L+DYN ++ S LHL
Sbjct: 86 KTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHLF 145
Query: 266 L 268
L
Sbjct: 146 L 146
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 146 bits (355), Expect = 1e-35
Identities = 72/76 (94%), Positives = 72/76 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 236 XQKESTLHLVLRLRGG 283
QKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 141 bits (341), Expect = 5e-34
Identities = 69/76 (90%), Positives = 69/76 (90%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
MQIFVKTLTGKTITLEVE SDTIENVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 464 IQKEXTLHXXXRLXGG 511
IQKE TLH RL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 126 bits (304), Expect = 2e-29
Identities = 62/67 (92%), Positives = 62/67 (92%)
Frame = +2
Query: 272 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTL 451
L MQIFVKTLTGKTITLEVE SDTIENVKAKI DKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 75 LTSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 134
Query: 452 SDYNIQK 472
SDYNIQK
Sbjct: 135 SDYNIQK 141
Score = 125 bits (302), Expect = 3e-29
Identities = 61/71 (85%), Positives = 63/71 (88%)
Frame = +2
Query: 32 CEFQKETTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLED 211
C + +TM IFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLED
Sbjct: 71 CRKELTSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 130
Query: 212 GRTLSDYNXQK 244
GRTLSDYN QK
Sbjct: 131 GRTLSDYNIQK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = +2
Query: 161 IPPDQQRLIFAGKQLEDGRTLSDYNXQKESTLHLVLRLRGGM 286
IPPDQQRLIFAGKQLEDGRTLSDYN QKESTLHLVLRLRGG+
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
Score = 78.2 bits (184), Expect = 6e-15
Identities = 36/42 (85%), Positives = 37/42 (88%)
Frame = +2
Query: 389 IPPDQQRLIFAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
IPPDQQRLIFAGKQLEDGRTLSDYNIQKE TLH RL GG+
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 IFVKTLTGKTITLEVEA-SDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNX 238
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L D T
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 239 QKESTLHLVLRLRGG 283
+TLHL++RL GG
Sbjct: 133 FAGATLHLIVRLLGG 147
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/75 (44%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +2
Query: 290 IFVKTLTGKTITLEVEA-SDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 466
I V TLTG+ I + ++ TI VK I K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 467 QKEXTLHXXXRLXGG 511
TLH RL GG
Sbjct: 133 FAGATLHLIVRLLGG 147
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +2
Query: 2 PTICDNFNNFCEFQKETTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQ---DKEGIPPD 172
P+ICD N K M+I KTL +T +E+ +T+ +K KI+ K+ P
Sbjct: 53 PSICDKDTNI----KSVNMIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHG 108
Query: 173 QQRLIFAGKQLEDGRTLSDYNXQKES 250
+LI+AGK L D L +YN ++S
Sbjct: 109 NIKLIYAGKILNDDNPLKEYNIDEKS 134
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIX---DKEGIPPDQQRLIFAGKQLEDGRTLS 454
M I KTL +T +E+ +T+ +K KI K+ P +LI+AGK L D L
Sbjct: 67 MIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLK 126
Query: 455 DYNIQKE 475
+YNI ++
Sbjct: 127 EYNIDEK 133
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 47 ETTMLIFVKTLTGKTITLEVEASDT-IXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 223
E T +F T TL +D + +K++I+ K GIP D QRL F K+L D TL
Sbjct: 3 EETFQVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATL 62
Query: 224 SDYNXQK 244
+ N ++
Sbjct: 63 AKVNLKQ 69
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 287 QIFVKTLTGKTITLEVEASDT-IENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
Q+F T TL +D + +K++I K GIP D QRL F K+L D TL+ N
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 464 IQK 472
+++
Sbjct: 67 LKQ 69
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 239 QKESTLHLVLRLRGGMQIFVKT--LTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRL 412
QK+ST+ ++ +++ V+ +G L++ + TIE ++ ++ DK G PP QR
Sbjct: 19 QKQSTVEVIKEKTVRLRVVVEDSETSGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRW 78
Query: 413 IFAGKQLEDGRTLSDYNIQK 472
I K + +L +++
Sbjct: 79 IIGKKMAKPNESLLQCKVRE 98
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+D + L +++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
Score = 36.3 bits (80), Expect = 0.022
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 152 KEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKES 250
+EGIP ++QRLIF GK L+D + L +++ S
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFDGASNS 51
>SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12)
Length = 533
Score = 35.5 bits (78), Expect = 0.039
Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 2/132 (1%)
Frame = +2
Query: 98 LEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKESTLH-LVLRL 274
LE+ + T+ N+K ++ G+P + Q + D L D+ K++ H L+L
Sbjct: 19 LEIASDKTVYNLKLICEEHFGVPVELQAIYLVD---NDDVELQDWACLKDAATHTFKLQL 75
Query: 275 RGGMQIFVKTLTGKTI-TLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTL 451
F L I LE+ + T+ N+K + G+P + Q + D L
Sbjct: 76 MESAAKFEVLLPNDDIECLEIASDKTVYNLKLICEEHFGVPVELQAIYLVD---NDDVEL 132
Query: 452 SDYNIQKEXTLH 487
D+ K+ H
Sbjct: 133 QDWACLKDAATH 144
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 35.5 bits (78), Expect = 0.039
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLED-GRTLSDY 460
M++ V G TL+V +EN +A + + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 461 NIQKEXTL 484
++++ +
Sbjct: 61 SVKENDVI 68
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 158 GIPPDQQRLIFAGKQLEDGRTLSDYNXQKES 250
GIP ++QRLIF GK L+D + L +++ S
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFDGASNS 31
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 386 GIPPDQQRLIFAGKQLEDGRTLSDYN 463
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKE 157
M ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKI 373
M ++++TLTG L V +TI +VKAKI
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKI 30
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/73 (24%), Positives = 39/73 (53%)
Frame = +2
Query: 35 EFQKETTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 214
+F ++T +L +T G T+ +E+ ++ ++KA+ + + GIP + RL LED
Sbjct: 179 KFARKTMLL---QTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDS 235
Query: 215 RTLSDYNXQKEST 253
+ + +++T
Sbjct: 236 EKICERGHLQKAT 248
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +2
Query: 290 IFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSD 457
+ ++T G T+ +E+ ++E++KA+ + GIP + RL LED + +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICE 240
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 65 FVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQK 244
FV G+ ITL + ++ + G P + ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 245 ESTLHLVLR 271
+TL + L+
Sbjct: 229 GATLQIELQ 237
>SB_16942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -2
Query: 366 AFTFSMVSDASTSSVMVLPVSVFTKICIPPLRRNTKW 256
+F S S TSS+ LPV K IP R TKW
Sbjct: 80 SFPLSSPSQTHTSSLRDLPVDALGKENIPKYRSGTKW 116
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 119 TIXNVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNXQKESTLHLVLRLRGGMQIF 295
T+ ++K + +K G+ RL+ GK++ D L DYN T+ L G F
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIR--LETWNGWADF 143
Query: 296 VKTLTGKTIT 325
+K T +T
Sbjct: 144 LKAATKGQLT 153
Score = 29.5 bits (63), Expect = 2.6
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Frame = +2
Query: 182 LIFAGKQLEDGRTLSDYNXQKESTLH--LVLRLRGGMQIFVKTLTGKTITLEVEAS---D 346
L +AG LED +D TL L+ + + + +G+ + S
Sbjct: 27 LNYAGGVLEDDWIFADIGIPPGVTLRCELIQNTKSYLNVHC-AYSGEIVKFTEPMSLFDT 85
Query: 347 TIENVKAKIXDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKEXTL 484
T+ ++K + +K G+ RL+ GK++ D L DYNI T+
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTI 132
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 245 ESTLHLVLRLRGGM 286
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 245 ESTLHLVLRLRGGM 286
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 311 GKTITLEVE-ASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLED 439
G T E+E A +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/65 (23%), Positives = 35/65 (53%)
Frame = +2
Query: 275 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLS 454
R +Q ++T GKTI L E + ++ + +K+G+ + ++L + ++L+ T +
Sbjct: 711 RDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDT 770
Query: 455 DYNIQ 469
+ +Q
Sbjct: 771 EEKLQ 775
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,328,836
Number of Sequences: 59808
Number of extensions: 272903
Number of successful extensions: 746
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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