Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0822
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 290 7e-79
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 290 7e-79
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 290 7e-79
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 149 2e-36
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 149 2e-36
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 110 1e-24
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 99 2e-21
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 74 8e-14
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 68 5e-12
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 66 3e-11
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 66 3e-11
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 55 5e-08
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 47 1e-05
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 40 0.001
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 40 0.001
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 38 0.006
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 37 0.015
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 34 0.10
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 33 0.18
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 32 0.32
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 32 0.32
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 31 0.96
AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical... 29 2.2
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 28 5.1
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 28 6.8
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 272
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 348
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381
Score = 287 bits (705), Expect = 4e-78
Identities = 143/153 (93%), Positives = 143/153 (93%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTL GKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 424
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 425 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457
Score = 237 bits (580), Expect = 5e-63
Identities = 118/123 (95%), Positives = 118/123 (95%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTL GKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 500
Query: 416 FAG 424
FAG
Sbjct: 501 FAG 503
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 247 IYSPFGITSERWNADLCENTYR*NHHTRS*SI*HH 351
+YS FG S+R ADL ++ NHH+R S HH
Sbjct: 504 VYSSFGAPSQRRYADLRQDFDWKNHHSRGRSFGHH 538
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 272
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 348
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 576
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 577 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 609
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 593 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 652
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 653 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 685
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 728
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 729 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 761
Score = 288 bits (706), Expect = 3e-78
Identities = 143/152 (94%), Positives = 143/152 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 745 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 804
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGG 511
FAGKQLEDGRTLSDYNIQKE TLH RL GG
Sbjct: 805 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 836
Score = 287 bits (705), Expect = 4e-78
Identities = 143/153 (93%), Positives = 143/153 (93%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTL GKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 424
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 425 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457
Score = 287 bits (705), Expect = 4e-78
Identities = 143/153 (93%), Positives = 143/153 (93%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTL GKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 500
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 501 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 533
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 272
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 348
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 424
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 425 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 500
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 501 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 533
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 576
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 577 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 609
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 593 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 652
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 653 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 685
Score = 290 bits (711), Expect = 7e-79
Identities = 144/153 (94%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 728
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTLSDYNIQKE TLH RL GGM
Sbjct: 729 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 761
Score = 287 bits (703), Expect = 6e-78
Identities = 142/152 (93%), Positives = 143/152 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLI
Sbjct: 745 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 804
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGG 511
FAGKQLEDGRTLSDYNIQK+ TLH RL GG
Sbjct: 805 FAGKQLEDGRTLSDYNIQKQSTLHLVLRLRGG 836
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 149 bits (361), Expect = 2e-36
Identities = 73/77 (94%), Positives = 74/77 (96%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 236 XQKESTLHLVLRLRGGM 286
QKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 143 bits (347), Expect = 9e-35
Identities = 70/77 (90%), Positives = 71/77 (92%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
MQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 464 IQKEXTLHXXXRLXGGM 514
IQKE TLH RL GG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 149 bits (361), Expect = 2e-36
Identities = 73/77 (94%), Positives = 74/77 (96%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 236 XQKESTLHLVLRLRGGM 286
QKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 143 bits (347), Expect = 9e-35
Identities = 70/77 (90%), Positives = 71/77 (92%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
MQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 464 IQKEXTLHXXXRLXGGM 514
IQKE TLH RL GG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 110 bits (264), Expect = 1e-24
Identities = 58/141 (41%), Positives = 86/141 (60%)
Frame = +2
Query: 77 LTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKESTL 256
+TG IT VEASD I ++ K+ + + P ++ +D RT+SDYN + STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 257 HLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLE 436
L + ++ + + VKTL GKTI + ++ +DT+E +K K+ +K G+PPDQQRLIF QLE
Sbjct: 152 RLEVPVKEKLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLE 211
Query: 437 DGRTLSDYNIQKEXTLHXXXR 499
+ R L YNI+ E +H R
Sbjct: 212 NDRALFAYNIRDEDIIHLVSR 232
Score = 81.0 bits (191), Expect = 7e-16
Identities = 37/74 (50%), Positives = 51/74 (68%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
+ + VKTL GKTI + ++ +DT+ +K K+Q+K G+PPDQQRLIF QLE+ R L YN
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220
Query: 236 XQKESTLHLVLRLR 277
+ E +HLV R R
Sbjct: 221 IRDEDIIHLVSRHR 234
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 53 TMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGI 163
TML+ VKT TGKTIT+E NVK +++DK+G+
Sbjct: 58 TMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGI 391
M + VKT TGKTIT+E +NVK ++ DK+G+
Sbjct: 59 MLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 99.1 bits (236), Expect = 2e-21
Identities = 46/76 (60%), Positives = 57/76 (75%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
MLI VKTLTGK I L++E +D + +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 236 XQKESTLHLVLRLRGG 283
S LHLVL LRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
Score = 89.0 bits (211), Expect = 3e-18
Identities = 41/76 (53%), Positives = 52/76 (68%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
M I VKTLTGK I L++E +D +E +K K+ +KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 464 IQKEXTLHXXXRLXGG 511
+ LH L GG
Sbjct: 61 VLGGSVLHLVLALRGG 76
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.1 bits (174), Expect = 8e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIP 394
MQIFVKTLTGKTITLEVEASDTIENVKAKI DKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
Score = 71.3 bits (167), Expect = 6e-13
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIP 166
M IFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 68.1 bits (159), Expect = 5e-12
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +2
Query: 62 IFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLSDY 232
I+V+ G+T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+ D TL D
Sbjct: 105 IYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFDN 163
Query: 233 NXQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 334
+ + STL L + + + +FVKT TGKTIT+ +
Sbjct: 164 SFENGSTLRLEVSIEKEIDVFVKTYTGKTITISI 197
Score = 50.0 bits (114), Expect = 1e-06
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Frame = +2
Query: 104 VEASDTIXNVKAKIQDKEGIPPDQQRLIFAGK-QLEDGRTLSDYNXQKESTLHLVLRLRG 280
+E DT+ +VK IQ+ + P + + +E + + N + T +
Sbjct: 46 IEMEDTVQDVK--IQEAQQAPLRESEEVTEDPISVESSEVIGNLNVKVAETQQELHH--E 101
Query: 281 GMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLE---DGRTL 451
G++I+V+ G+T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+ D TL
Sbjct: 102 GIRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTL 160
Query: 452 SDYNIQKEXTL 484
D + + TL
Sbjct: 161 FDNSFENGSTL 171
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGI 163
ML+ +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGI 391
M + +KT TGK IT+E S VK ++ DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 35 EFQKETTMLIFVKTLTGKTITLEV 106
E E + +FVKT TGKTIT+ +
Sbjct: 174 EVSIEKEIDVFVKTYTGKTITISI 197
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/75 (45%), Positives = 52/75 (69%)
Frame = +2
Query: 59 LIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNX 238
++FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD
Sbjct: 1 MVFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGI 55
Query: 239 QKESTLHLVLRLRGG 283
E+T+++ L L GG
Sbjct: 56 DSEATIYVNLELLGG 70
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +2
Query: 290 IFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 469
+FVKTL +T+ LEV A++ + ++K KI EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 470 KEXTLHXXXRLXGG 511
E T++ L GG
Sbjct: 57 SEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/75 (45%), Positives = 52/75 (69%)
Frame = +2
Query: 59 LIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNX 238
++FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD
Sbjct: 1 MVFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGI 55
Query: 239 QKESTLHLVLRLRGG 283
E+T+++ L L GG
Sbjct: 56 DSEATIYVNLELLGG 70
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +2
Query: 290 IFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 469
+FVKTL +T+ LEV A++ + ++K KI EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 470 KEXTLHXXXRLXGG 511
E T++ L GG
Sbjct: 57 SEATIYVNLELLGG 70
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 54.8 bits (126), Expect = 5e-08
Identities = 27/70 (38%), Positives = 41/70 (58%)
Frame = +2
Query: 62 IFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQ 241
IFVK L G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DYN Q
Sbjct: 156 IFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQ 214
Query: 242 KESTLHLVLR 271
K ST+ + R
Sbjct: 215 KSSTITMYFR 224
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +2
Query: 287 QIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 466
QIFVK L G + ++ DT+ ++K I + IP L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 467 QKEXTL 484
QK T+
Sbjct: 214 QKSSTI 219
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/47 (44%), Positives = 35/47 (74%)
Frame = +2
Query: 59 LIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGK 199
++FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 1 MVFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/46 (45%), Positives = 33/46 (71%)
Frame = +2
Query: 290 IFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGK 427
+FVKTL +T+ LEV A++ + ++K KI EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/72 (37%), Positives = 36/72 (50%)
Frame = +2
Query: 287 QIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 466
Q FV+ L GKT TL V ASDT+E K ++ R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 467 QKEXTLHXXXRL 502
T+ R+
Sbjct: 99 SNNSTMDLHFRI 110
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/70 (37%), Positives = 35/70 (50%)
Frame = +2
Query: 65 FVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQK 244
FV+ L GKT TL V ASDT+ K ++ R+ + GK L D T +YN
Sbjct: 46 FVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNISN 100
Query: 245 ESTLHLVLRL 274
ST+ L R+
Sbjct: 101 NSTMDLHFRI 110
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +2
Query: 29 FCEFQKETTMLIFV--KTLTGKTITLEVEASDTIXNVKAKIQDKEG--IPPDQQRLIFAG 196
FC F M++ V +TLT LE+ TI VKA + ++G P+ Q+LI+ G
Sbjct: 41 FCSFINNQMMVLSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNG 100
Query: 197 KQLEDGRTLSDYNXQKESTLHLVLRLR 277
K L+D + + + ++L R
Sbjct: 101 KILDDSVKVGEVGFDSSKFVVVMLSKR 127
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEG--IPPDQQRLIFAGKQLED 439
+ + +TLT LE+ TI VKA + ++G P+ Q+LI+ GK L+D
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDD 105
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = +2
Query: 80 TGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKESTLH 259
+G L V SDTI VK I + R++ K LED TL+ YN Q+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 260 L 262
L
Sbjct: 241 L 241
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/59 (38%), Positives = 29/59 (49%)
Frame = +2
Query: 308 TGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEXTL 484
+G L V SDTI VK I + R++ K LED TL+ YNIQ+ TL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTL 239
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/69 (24%), Positives = 39/69 (56%)
Frame = +2
Query: 77 LTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKESTL 256
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 257 HLVLRLRGG 283
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/69 (20%), Positives = 35/69 (50%)
Frame = +2
Query: 305 LTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEXTL 484
+ G + ++ + + +K +I D+ G+P +Q+L+ G ++D + + YN+ +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 485 HXXXRLXGG 511
+ + GG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/69 (24%), Positives = 39/69 (56%)
Frame = +2
Query: 77 LTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKESTL 256
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 257 HLVLRLRGG 283
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/69 (20%), Positives = 35/69 (50%)
Frame = +2
Query: 305 LTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEXTL 484
+ G + ++ + + +K +I D+ G+P +Q+L+ G ++D + + YN+ +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 485 HXXXRLXGG 511
+ + GG
Sbjct: 644 YLQVKERGG 652
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 98 LEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKESTLHLVLRLR 277
L V SDTI ++K +I + R++ GK LED +L+ YN Q+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 326 LEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 472
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQE 258
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +2
Query: 98 LEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKESTL 256
L V SDTI +K +I GI R K LED TL+ YN ++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +2
Query: 326 LEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEXTL 484
L V SDTI +K +I GI R K LED TL+ YNI++ T+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/90 (22%), Positives = 44/90 (48%)
Frame = +2
Query: 2 PTICDNFNNFCEFQKETTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQR 181
P ++ + E + L ++ G+ ++ +++ +K KI+ + GIP +
Sbjct: 125 PRSAESALKYVETCTKVVDLCIAVSMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFW 184
Query: 182 LIFAGKQLEDGRTLSDYNXQKESTLHLVLR 271
L GK L D + L+DY ++++ L++R
Sbjct: 185 LRLHGKPLYDDKKLADYKW--DTSVELLVR 212
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 302 TLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDY 460
++ G+ ++ +++E +K KI + GIP + L GK L D + L+DY
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +2
Query: 50 TTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 229
TT+ + +KTL + T+ + DTI ++ + + I QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQA 78
Query: 230 YNXQKESTLHLVLR 271
T+HLV R
Sbjct: 79 AGISDGQTVHLVDR 92
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +2
Query: 50 TTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 229
TT+ + +KTL + T+ + DTI ++ + + I QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQA 78
Query: 230 YNXQKESTLHLVLR 271
T+HLV R
Sbjct: 79 AGISDGQTVHLVDR 92
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +2
Query: 299 KTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 466
KT + +TL + + IE++ + IP D+ ++F GK+L + D ++
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSL 68
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = +2
Query: 71 KTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKES 250
KT + +TL + + I ++ ++ IP D+ ++F GK+L + D + +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 251 TLHLV 265
+ L+
Sbjct: 73 QIMLL 77
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 32.3 bits (70), Expect = 0.32
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 305 LTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 469
L G I +E+++ DTI V + G+ +QRL+ K+L+ +TL + I+
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIK 243
Score = 31.5 bits (68), Expect = 0.55
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 77 LTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKESTL 256
L G I +E+++ DTI V + G+ +QRL+ K+L+ +TL + + S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGI 163
ML+ +KT TGKTIT+E S VK +++ K+G+
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGV 31
Score = 28.7 bits (61), Expect = 3.9
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 460
M + +KT TGKTIT+E S VK ++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 461 NIQK 472
IQ+
Sbjct: 56 KIQE 59
>AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical
protein F57B10.4 protein.
Length = 691
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 101 EVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS-DYNXQKESTLHLVLRLR 277
E E S++I N++A ++D + ++ QLE+ + + +K+S + V R
Sbjct: 288 EAENSESIINLEASLEDIKYQNKKVRKSFDQINQLENAYIVKKEVLTRKKSAIEDVKRQI 347
Query: 278 GGMQIFVKTLTGKTITLEVEASDTIENVKAK 370
+I + L K VE SDT ENV++K
Sbjct: 348 AESKITLNKL--KVTVRAVERSDTPENVESK 376
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +2
Query: 182 LIFAGKQLEDGRTLSDYNXQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 361
L F G G LSD + + R +G ++ K++ G + LE E ++ ++ +
Sbjct: 409 LPFVGFSYTHGSLLSDARSLTDEIRAIAQRCQGDAELMEKSVDGFMVELENEKAELVQKL 468
Query: 362 K 364
K
Sbjct: 469 K 469
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/52 (21%), Positives = 28/52 (53%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLED 439
+Q+ + + TGK++ + VE + +E D+EG+ L+ + ++ ++
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,623,496
Number of Sequences: 27780
Number of extensions: 208918
Number of successful extensions: 663
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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