Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0822
(664 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 284 4e-77
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 284 4e-77
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 284 4e-77
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 284 4e-77
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 284 4e-77
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 284 4e-77
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 284 4e-77
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 284 4e-77
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 284 4e-77
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 284 4e-77
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 284 4e-77
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 284 4e-77
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 277 6e-75
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 274 3e-74
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 274 4e-74
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 256 1e-68
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 231 2e-61
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 229 1e-60
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 147 5e-36
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 146 9e-36
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 146 9e-36
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 146 1e-35
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 146 1e-35
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 122 3e-28
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 113 1e-25
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 90 1e-18
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 89 2e-18
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 89 2e-18
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 79 3e-15
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 73 1e-13
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 73 2e-13
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 60 1e-09
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 51 8e-07
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 50 1e-06
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 49 3e-06
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 48 4e-06
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 48 4e-06
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 48 4e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 47 1e-05
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 47 1e-05
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 46 2e-05
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 46 3e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 45 4e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 45 5e-05
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 45 5e-05
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 45 5e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 44 9e-05
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 44 1e-04
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 44 1e-04
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 44 1e-04
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 44 1e-04
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 43 2e-04
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 42 4e-04
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 41 6e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 39 0.003
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 38 0.006
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 38 0.006
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 37 0.014
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.014
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.014
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 36 0.024
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 35 0.042
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 34 0.073
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 32 0.39
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 31 0.52
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 29 3.6
At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains ... 28 4.8
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 27 8.4
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 305
Score = 282 bits (691), Expect = 2e-76
Identities = 138/152 (90%), Positives = 143/152 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGG 511
FAGKQLEDGRTL+DYNIQKE TLH RL GG
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 282 bits (691), Expect = 2e-76
Identities = 138/152 (90%), Positives = 143/152 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGG 511
FAGKQLEDGRTL+DYNIQKE TLH RL GG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 282 bits (691), Expect = 2e-76
Identities = 138/152 (90%), Positives = 143/152 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGG 511
FAGKQLEDGRTL+DYNIQKE TLH RL GG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 207 bits (505), Expect = 6e-54
Identities = 102/110 (92%), Positives = 106/110 (96%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKE 385
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKE
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 305
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 381
Score = 207 bits (505), Expect = 6e-54
Identities = 102/110 (92%), Positives = 106/110 (96%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKE 385
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKE
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 305
Score = 207 bits (505), Expect = 6e-54
Identities = 102/110 (92%), Positives = 106/110 (96%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKE 385
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKE
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 305
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 381
Score = 207 bits (505), Expect = 6e-54
Identities = 102/110 (92%), Positives = 106/110 (96%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKE 385
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKE
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 305
Score = 207 bits (505), Expect = 6e-54
Identities = 102/110 (92%), Positives = 106/110 (96%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKE 385
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKE
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 282 bits (691), Expect = 2e-76
Identities = 138/152 (90%), Positives = 143/152 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGG 511
FAGKQLEDGRTL+DYNIQKE TLH RL GG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 282 bits (691), Expect = 2e-76
Identities = 138/152 (90%), Positives = 143/152 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGG 511
FAGKQLEDGRTL+DYNIQKE TLH RL GG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 282 bits (691), Expect = 2e-76
Identities = 138/152 (90%), Positives = 143/152 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGG 511
FAGKQLEDGRTL+DYNIQKE TLH RL GG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 284 bits (696), Expect = 4e-77
Identities = 139/153 (90%), Positives = 144/153 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 282 bits (691), Expect = 2e-76
Identities = 138/152 (90%), Positives = 143/152 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGG 511
FAGKQLEDGRTL+DYNIQKE TLH RL GG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 277 bits (678), Expect = 6e-75
Identities = 138/153 (90%), Positives = 143/153 (93%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+D NIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGM 152
Score = 273 bits (670), Expect = 6e-74
Identities = 137/153 (89%), Positives = 142/153 (92%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKE IPPDQQRLI
Sbjct: 136 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLI 195
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 196 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 228
Score = 238 bits (583), Expect = 2e-63
Identities = 118/129 (91%), Positives = 122/129 (94%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+S TI+NVKAKI DKEGIPPDQQRLI
Sbjct: 212 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLI 271
Query: 416 FAGKQLEDG 442
FAGKQLE G
Sbjct: 272 FAGKQLEGG 280
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 274 bits (673), Expect = 3e-74
Identities = 135/152 (88%), Positives = 141/152 (92%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGI PDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLI 196
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGG 511
FAGKQ EDGRTL+DYNIQKE TLH RL GG
Sbjct: 197 FAGKQHEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 266 bits (651), Expect = 1e-71
Identities = 129/153 (84%), Positives = 139/153 (90%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IF+KTLTGKT LEVE+SDTI NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
Q++STLHL+LR RGGMQIFVKTLTGKTITLEVE+SDTI+N+KAKI DKEGIPPDQQRLI
Sbjct: 61 VQEDSTLHLLLRFRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 153
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 274 bits (671), Expect = 4e-74
Identities = 133/153 (86%), Positives = 141/153 (92%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGGMQIFV+TLT KTI LEVE+SDT +NVKAKI DKEGIPPDQQRLI
Sbjct: 139 IQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLI 198
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
FAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 199 FAGKQLEDGRTLADYNIQKESTLHLVLRLCGGM 231
Score = 253 bits (619), Expect = 9e-68
Identities = 128/153 (83%), Positives = 135/153 (88%), Gaps = 1/153 (0%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFV+TLT KTI LEVE+SDT NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRL GGMQIFV TLTGKTITLEVE+SDTI+NVKAKI DKE I PDQQRLI
Sbjct: 215 IQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLI 274
Query: 416 FAGKQLEDG-RTLSDYNIQKEXTLHXXXRLXGG 511
FAG+QLEDG TL+DYNIQKE TLH RL GG
Sbjct: 275 FAGEQLEDGYYTLADYNIQKESTLHLVLRLRGG 307
Score = 250 bits (613), Expect = 5e-67
Identities = 122/154 (79%), Positives = 136/154 (88%)
Frame = +2
Query: 53 TMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 232
+M I KTLT KTIT++V +SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY
Sbjct: 2 SMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADY 61
Query: 233 NXQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRL 412
+ QK+S LHL LRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEG+PPDQQRL
Sbjct: 62 SIQKDSILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRL 121
Query: 413 IFAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
IFAGKQL+DGRTL+DYNIQKE TLH RL GGM
Sbjct: 122 IFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGM 155
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 256 bits (626), Expect = 1e-68
Identities = 127/154 (82%), Positives = 138/154 (89%)
Frame = +2
Query: 53 TMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 232
T+ I+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DY
Sbjct: 2 TIQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADY 61
Query: 233 NXQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRL 412
N QKESTLHLVLRLRGGMQIFV+TLTGKTITLEV++SDTI+NVKAKI DKEGI P QQRL
Sbjct: 62 NIQKESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRL 121
Query: 413 IFAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
IFAGKQLEDGRTL+DYNIQKE TLH RL GGM
Sbjct: 122 IFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGM 155
Score = 220 bits (538), Expect = 6e-58
Identities = 116/160 (72%), Positives = 130/160 (81%), Gaps = 7/160 (4%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFV+TLTGKTITLEV++SDTI NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGK-----TITLEVEASDTIENVKAKIXDKEGIPPD 400
QKESTLHLVLRL GGMQIFV T +GK T+TL+VE+SDTIENVKAKI D+EG+ PD
Sbjct: 139 IQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPD 198
Query: 401 QQRLIFAGKQL--EDGRTLSDYNIQKEXTLHXXXRLXGGM 514
QRLIF G++L ED RTL+DY I+ TL RL G M
Sbjct: 199 HQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRGDM 238
Score = 192 bits (468), Expect = 2e-49
Identities = 103/155 (66%), Positives = 116/155 (74%), Gaps = 2/155 (1%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQ--QRLIFAGKQLEDGRTLSD 229
M IFVKTLT K I LEVE+ DTI NVKA +QDKEGI P QRLIF GK+L+DG TL+D
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 230 YNXQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQR 409
Y+ QKESTLHLVL GMQIFVK GK ITLEV +SDTI++VKAKI DK G PPDQQ
Sbjct: 379 YSIQKESTLHLVL----GMQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQI 434
Query: 410 LIFAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
L+F G QL+DGRTL DYNI+ E TLH + GM
Sbjct: 435 LLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGM 469
Score = 190 bits (463), Expect = 7e-49
Identities = 103/156 (66%), Positives = 114/156 (73%), Gaps = 7/156 (4%)
Frame = +2
Query: 56 MLIFVKTL-------TGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 214
M IFVKT T KTITLEVE+SDTI NVK KIQ K GIP D+QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 215 RTLSDYNXQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIP 394
RTL DYN QK ST+H + RGGMQIF+KTLTGKTI LEVE+SDTI NVK KI KEGI
Sbjct: 529 RTLLDYNIQKGSTIHQLFLQRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIK 588
Query: 395 PDQQRLIFAGKQLEDGRTLSDYNIQKEXTLHXXXRL 502
PDQQ LIF G+QLEDG TL DY+I K+ TL+ RL
Sbjct: 589 PDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLVLRL 624
Score = 190 bits (462), Expect = 9e-49
Identities = 103/151 (68%), Positives = 115/151 (76%), Gaps = 7/151 (4%)
Frame = +2
Query: 56 MLIFVKTL-----TGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 220
M IFVK L TG+ LEVE+SDTI NVKAK+QDKE IP D RLIFAGK LE GRT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 221 LSDYNXQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGI--P 394
L+ YN QK STL+LV R R GMQIFVKTLT K I LEVE+ DTIENVKA + DKEGI
Sbjct: 298 LAHYNIQKGSTLYLVTRFRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQ 357
Query: 395 PDQQRLIFAGKQLEDGRTLSDYNIQKEXTLH 487
P+ QRLIF GK+L+DG TL+DY+IQKE TLH
Sbjct: 358 PNLQRLIFLGKELKDGCTLADYSIQKESTLH 388
Score = 189 bits (461), Expect = 1e-48
Identities = 102/160 (63%), Positives = 113/160 (70%), Gaps = 7/160 (4%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVK GK ITLEV +SDTI +VKAKIQDK G PPDQQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 236 XQKESTLHLVLRLRGGMQIFVKTL-------TGKTITLEVEASDTIENVKAKIXDKEGIP 394
+ ESTLHL +R GMQIFVKT T KTITLEVE+SDTI+NVK KI K GIP
Sbjct: 453 IRNESTLHLFFHIRHGMQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIP 512
Query: 395 PDQQRLIFAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
D+QRLIF G+ L RTL DYNIQK T+H GGM
Sbjct: 513 LDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGGM 552
Score = 180 bits (439), Expect = 6e-46
Identities = 101/165 (61%), Positives = 117/165 (70%), Gaps = 12/165 (7%)
Frame = +2
Query: 56 MLIFVKTLTGK-----TITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQL--EDG 214
M IFV T +GK T+TL+VE+SDTI NVKAKIQD+EG+ PD QRLIF G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 215 RTLSDYNXQKESTLHLVLRLRGGMQIFVKTL-----TGKTITLEVEASDTIENVKAKIXD 379
RTL+DY + STL L LRLRG M IFVK L TG+ LEVE+SDTI+NVKAK+ D
Sbjct: 215 RTLADYGIRNRSTLCLALRLRGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQD 274
Query: 380 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
KE IP D RLIFAGK LE GRTL+ YNIQK TL+ R GM
Sbjct: 275 KERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCGM 319
Score = 112 bits (269), Expect = 2e-25
Identities = 57/80 (71%), Positives = 64/80 (80%)
Frame = +2
Query: 38 FQKETTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 217
F + M IF+KTLTGKTI LEVE+SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG
Sbjct: 546 FLQRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGV 605
Query: 218 TLSDYNXQKESTLHLVLRLR 277
TL DY+ K+STL+LVLRLR
Sbjct: 606 TLGDYDIHKKSTLYLVLRLR 625
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 231 bits (566), Expect = 2e-61
Identities = 112/152 (73%), Positives = 126/152 (82%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGG I VKTLTGK I +++E +DTI+ +K ++ +KEGIPP QQRLI
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGG 511
+AGKQL D +T DYNI+ LH L GG
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 229 bits (560), Expect = 1e-60
Identities = 111/153 (72%), Positives = 126/153 (82%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLI 415
QKESTLHLVLRLRGG I VKTLTGK I +++E +DTI+ +K ++ +KEGIPP QQRLI
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
Query: 416 FAGKQLEDGRTLSDYNIQKEXTLHXXXRLXGGM 514
+AGKQL D +T DY I+ LH L GG+
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 153
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 147 bits (357), Expect = 5e-36
Identities = 78/106 (73%), Positives = 83/106 (78%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 373
QKESTLHLVLRLRGG K KT T + T + VK +
Sbjct: 61 IQKESTLHLVLRLRGG----AKKRKKKTYTKPKKIKHTHKKVKLAV 102
Score = 139 bits (337), Expect = 1e-33
Identities = 67/76 (88%), Positives = 70/76 (92%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
MQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 464 IQKEXTLHXXXRLXGG 511
IQKE TLH RL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 146 bits (355), Expect = 9e-36
Identities = 71/77 (92%), Positives = 74/77 (96%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGM 286
QKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 140 bits (338), Expect = 1e-33
Identities = 67/77 (87%), Positives = 71/77 (92%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
MQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 464 IQKEXTLHXXXRLXGGM 514
IQKE TLH RL GG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 146 bits (355), Expect = 9e-36
Identities = 71/77 (92%), Positives = 74/77 (96%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGGM 286
QKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 140 bits (338), Expect = 1e-33
Identities = 67/77 (87%), Positives = 71/77 (92%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
MQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 464 IQKEXTLHXXXRLXGGM 514
IQKE TLH RL GG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 146 bits (354), Expect = 1e-35
Identities = 71/76 (93%), Positives = 73/76 (96%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGG 283
QKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 139 bits (337), Expect = 1e-33
Identities = 67/76 (88%), Positives = 70/76 (92%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
MQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 464 IQKEXTLHXXXRLXGG 511
IQKE TLH RL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 146 bits (354), Expect = 1e-35
Identities = 71/76 (93%), Positives = 73/76 (96%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M IFVKTLTGKTITLEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 236 XQKESTLHLVLRLRGG 283
QKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 139 bits (337), Expect = 1e-33
Identities = 67/76 (88%), Positives = 70/76 (92%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
MQIFVKTLTGKTITLEVE+SDTI+NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 464 IQKEXTLHXXXRLXGG 511
IQKE TLH RL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 122 bits (293), Expect = 3e-28
Identities = 72/158 (45%), Positives = 96/158 (60%), Gaps = 15/158 (9%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGK------------ 199
M+IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSIN 109
Query: 200 -QLEDGRTLSDYNXQKESTLHLVLRLRGG--MQIFVKTLTGKTITLEVEASDTIENVKAK 370
++ D D E T LVLRL M+IFV T+ KT LEV+ SDTI+ +K+
Sbjct: 110 LEVADSSDTIDLKINGEPTRQLVLRLGPAVLMRIFVSTIKEKTFILEVKGSDTIKKLKSM 169
Query: 371 IXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEXTL 484
I D+ G P DQQ L G +L++ T+SDYNI+ + L
Sbjct: 170 IHDQGGPPVDQQDLNHLGTKLKNNATISDYNIKPDANL 207
Score = 30.7 bits (66), Expect = 0.90
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 20/120 (16%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGI------PPDQQRLIFAGKQLEDGR 217
M I +KTL GK I LEVE S ++K + + PD ++ + GR
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLKIHGEPTRELVVDLSPTPDTGAIMMIFIKTLTGR 60
Query: 218 T-------------LSDYNXQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV-EASDTIE 355
T L + +KE RL +I +KT+ GK+I LEV ++SDTI+
Sbjct: 61 TNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTID 120
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 113 bits (272), Expect = 1e-25
Identities = 55/80 (68%), Positives = 64/80 (80%)
Frame = +2
Query: 35 EFQKETTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 214
+F+ E M IF+KTLTG+ I LEVE DTI N+KAKIQDK+GIP DQQRLIF GKQLEDG
Sbjct: 80 DFRHEV-MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDG 138
Query: 215 RTLSDYNXQKESTLHLVLRL 274
TL+DYN Q +S LHL+ RL
Sbjct: 139 LTLADYNIQNDSILHLIKRL 158
Score = 111 bits (268), Expect = 3e-25
Identities = 73/159 (45%), Positives = 92/159 (57%), Gaps = 17/159 (10%)
Frame = +2
Query: 77 LTGKT-ITLEVEASDTIXNVKAKIQD--KEGIPPD--QQRLIFAGKQLEDGRTLSDYNXQ 241
+ GKT I LEV++S T+ N+K + IPPD +++ D T+ +
Sbjct: 1 MDGKTRINLEVDSSKTV-NLKIDEDPTISQNIPPDILHGKVMHLSINTVDKNTMINLEVD 59
Query: 242 KESTLHLVL--RLRGG----------MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKE 385
T+ L + GG M IF+KTLTG+ I LEVE DTIEN+KAKI DK+
Sbjct: 60 SSKTIDLNIGENPTGGYNGPDFRHEVMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQ 119
Query: 386 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKEXTLHXXXRL 502
GIP DQQRLIF GKQLEDG TL+DYNIQ + LH RL
Sbjct: 120 GIPVDQQRLIFKGKQLEDGLTLADYNIQNDSILHLIKRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 89.8 bits (213), Expect = 1e-18
Identities = 42/76 (55%), Positives = 54/76 (71%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M I VKTLT K I +E+E +DTI +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 236 XQKESTLHLVLRLRGG 283
++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
Score = 83.8 bits (198), Expect = 9e-17
Identities = 38/76 (50%), Positives = 51/76 (67%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
M+I VKTLT K I +E+E +DTIE +K +I +KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 464 IQKEXTLHXXXRLXGG 511
+++ LH L GG
Sbjct: 61 LERGSVLHLVLALRGG 76
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 89.0 bits (211), Expect = 2e-18
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
Frame = +2
Query: 23 NNFCEFQKETTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQ 202
N+ + + T++I++ TL G I + V SD+I +VK +IQ G Q+L+F G++
Sbjct: 24 NSCLDSYPDDTIMIYL-TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRE 82
Query: 203 L-EDGRTLSDYNXQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXD 379
L + DY + + LHLVL+L + VKT GK VE I VK +I
Sbjct: 83 LARSNSNMRDYGVSEGNILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISK 142
Query: 380 KEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKEXTLHXXXR 499
K G + PD+Q +++ G++LED ++D + LH R
Sbjct: 143 KRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 89.0 bits (211), Expect = 2e-18
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
Frame = +2
Query: 23 NNFCEFQKETTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQ 202
N+ + + T++I++ TL G I + V SD+I +VK +IQ G Q+L+F G++
Sbjct: 24 NSCLDSYPDDTIMIYL-TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRE 82
Query: 203 L-EDGRTLSDYNXQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXD 379
L + DY + + LHLVL+L + VKT GK VE I VK +I
Sbjct: 83 LARSNSNMRDYGVSEGNILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISK 142
Query: 380 KEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKEXTLHXXXR 499
K G + PD+Q +++ G++LED ++D + LH R
Sbjct: 143 KRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 79.0 bits (186), Expect = 3e-15
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 4/154 (2%)
Frame = +2
Query: 38 FQKETTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLE-DG 214
F + +L+F+ T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ +
Sbjct: 27 FNLDDPILVFL-TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRND 85
Query: 215 RTLSDYNXQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKE--- 385
+ DY LHLV+RL I V+T+ GK L VE S + VK +I KE
Sbjct: 86 SQIRDYGLADGKLLHLVIRLSDLQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKEL 145
Query: 386 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKEXTLH 487
GIP D + L G++L+D R ++D + +H
Sbjct: 146 GIPRDHE-LTLDGEELDDQRLITDLCQNGDNVIH 178
Score = 44.0 bits (99), Expect = 9e-05
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +2
Query: 62 IFVKTLTGKTITLEVEASDTIXNVKAKIQDKE---GIPPDQQRLIFAGKQLEDGRTLSDY 232
I V+T+ GK L VE S + VK +I KE GIP D + L G++L+D R ++D
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169
Query: 233 NXQKESTLHLVL 268
++ +HL++
Sbjct: 170 CQNGDNVIHLLI 181
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 73.3 bits (172), Expect = 1e-13
Identities = 34/87 (39%), Positives = 53/87 (60%)
Frame = +2
Query: 11 CDNFNNFCEFQKETTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIF 190
C + N E E+T+ + +KTL +T T +V ++T+ K KI + G+P QQRLIF
Sbjct: 9 CSSSTNASEKTPESTLELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIF 68
Query: 191 AGKQLEDGRTLSDYNXQKESTLHLVLR 271
G+ L+D LS+Y+ + TLHL++R
Sbjct: 69 RGRVLKDDHPLSEYHLENGHTLHLIVR 95
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/72 (38%), Positives = 45/72 (62%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 464 IQKEXTLHXXXR 499
++ TLH R
Sbjct: 84 LENGHTLHLIVR 95
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 72.5 bits (170), Expect = 2e-13
Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 3/136 (2%)
Frame = +2
Query: 53 TMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSD 229
++L+F+ +++G T+ + + SD+I VK +IQ G +Q+L+F+G++L + + D
Sbjct: 34 SVLVFL-SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKD 92
Query: 230 YNXQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI-XDKEGIPP-DQ 403
Y S LHLVL+L + + V T GK V+ + +K +I + +G P D
Sbjct: 93 YGVTGGSVLHLVLKLYDPLLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDD 152
Query: 404 QRLIFAGKQLEDGRTL 451
Q ++F G++L+D R +
Sbjct: 153 QEILFKGEKLDDNRII 168
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKI-QDKEGIPP-DQQRLIFAGKQLEDGRTLSD 229
+L+ V T GK V+ + +K +I ++ +G P D Q ++F G++L+D R +
Sbjct: 111 LLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDG 170
Query: 230 YNXQKESTLHLVLR--LRGGMQIFVKTLTGKTITLE 331
S +HL+++ + ++ T TGK LE
Sbjct: 171 ICKDGNSVIHLLVKKSVEDTVKREEDTATGKDSLLE 206
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 60.5 bits (140), Expect = 1e-09
Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Frame = +2
Query: 104 VEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKESTLHLVLRLRGG 283
V ++++ +K + D + + Q+ + + + E+ R+LS S RL
Sbjct: 39 VGVAESLEMLKKQEIDADHMAASAQQTLISWRSGENSRSLSSSGECSSSNRPESTRL--- 95
Query: 284 MQIFVKTLTG-KTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDY 460
QIFV+ ++G KTI + E DT+E + +I K IP +QR+I+ GKQL+ +L+ Y
Sbjct: 96 -QIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYY 154
Query: 461 NIQKEXTLHXXXRL 502
+I+++ +L R+
Sbjct: 155 SIEQDASLQLVARM 168
Score = 57.6 bits (133), Expect = 7e-09
Identities = 28/79 (35%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +2
Query: 44 KETTMLIFVKTLTG-KTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 220
+ T + IFV+ ++G KTI + E DT+ + +I+ K IP +QR+I+ GKQL+ +
Sbjct: 91 ESTRLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENS 150
Query: 221 LSDYNXQKESTLHLVLRLR 277
L+ Y+ +++++L LV R++
Sbjct: 151 LTYYSIEQDASLQLVARMQ 169
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 50.8 bits (116), Expect = 8e-07
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +2
Query: 41 QKETTMLIFVKTLTGKTITLEVEASDTIXN-VKAKIQDKEGIPPDQQRLIFAGKQLEDGR 217
Q + FV+ L GK++TL + +K +I ++ IP QRLI G Q+ DG
Sbjct: 4 QSSKPLQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGS 63
Query: 218 TLSDYNXQKESTLHLVLRLRGGMQIFVKTLTG 313
+S Q ++T++LVL LRGG F L G
Sbjct: 64 AIS----QPDATVNLVLSLRGGKGGFGSLLRG 91
Score = 44.8 bits (101), Expect = 5e-05
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDY 460
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 461 NIQKEXTLHXXXRLXGG 511
Q + T++ L GG
Sbjct: 67 --QPDATVNLVLSLRGG 81
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 229
M IFVKTL+G +EV+ +D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 230 YNXQKESTLHLVL 268
N + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEG--IPPDQQRLIFAGKQLEDGRTLSD 457
M+IFVKTL+G +EV+ +D + +VK I +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 458 YNI 466
N+
Sbjct: 61 NNV 63
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/64 (29%), Positives = 36/64 (56%)
Frame = +2
Query: 296 VKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 475
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 476 XTLH 487
T+H
Sbjct: 82 HTIH 85
Score = 47.6 bits (108), Expect = 7e-06
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +2
Query: 68 VKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKE 247
++ G +++ T+ + K + +P +QQRLI+ G+ L+D +TL Y Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 248 STLHLV 265
T+H+V
Sbjct: 82 HTIHMV 87
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 48.4 bits (110), Expect = 4e-06
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGK---QLEDGRTLS 454
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 455 DYNIQKEXTLHXXXRLXGG 511
DY I+ H R+ GG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 226
M +F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 227 DYNXQKESTLHLVLRLRGG 283
DY + H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/69 (34%), Positives = 38/69 (55%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 236 XQKESTLHL 262
ES L L
Sbjct: 61 ILFESRLLL 69
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
M +++ T TG + ++ ++ +T+ +K KI +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 464 IQKEXTL 484
I E L
Sbjct: 61 ILFESRL 67
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +2
Query: 296 VKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 475
V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 476 XTLH 487
T+H
Sbjct: 82 HTVH 85
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +2
Query: 68 VKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKE 247
V+ G ++ T+ + K I +P +QQRLI+ G+ L+D +TL Y Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 248 STLHLV 265
T+H+V
Sbjct: 82 HTVHMV 87
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/67 (32%), Positives = 41/67 (61%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
M+I V T + ITL+V++ +T+ENVKA + + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 464 IQKEXTL 484
++ + L
Sbjct: 61 VKDDDLL 67
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/71 (29%), Positives = 42/71 (59%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M I V T + ITL+V++ +T+ NVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 236 XQKESTLHLVL 268
+ + L +++
Sbjct: 61 VKDDDLLMMMV 71
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/71 (43%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +2
Query: 200 QLEDGRTLSDYNXQKESTLHLVLRLRGG-----MQIFVKTLTGKTITLEVEASDTIENVK 364
+LED D E T LVL L G M IFV TL GKT LEV+ S+ I+ VK
Sbjct: 16 ELEDSSETIDIKIHAEPTRQLVLGLGQGPQGEMMSIFVSTLKGKTFNLEVKGSEIIQQVK 75
Query: 365 AKIXDKEGIPP 397
I D+ +PP
Sbjct: 76 NMIHDQ--VPP 84
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPP 169
M IFV TL GKT LEV+ S+ I VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVE-ASDTIE 355
M+I +KT GKTI LE+E +S+TI+
Sbjct: 1 MKILIKTEKGKTINLELEDSSETID 25
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/69 (34%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 460
++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSDY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 461 NIQKEXTLH 487
++++ TL+
Sbjct: 71 HVEEGHTLY 79
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +2
Query: 62 IFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDYNX 238
I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSDY+
Sbjct: 13 IKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYHV 72
Query: 239 QKESTLHLV 265
++ TL+LV
Sbjct: 73 EEGHTLYLV 81
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 236 XQKESTL 256
ES L
Sbjct: 61 ILFESLL 67
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/67 (34%), Positives = 35/67 (52%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
M + + T TG + ++ ++ +T+ +K KI +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 464 IQKEXTL 484
I E L
Sbjct: 61 ILFESLL 67
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +2
Query: 266 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQ-RLIFAGKQLEDG 442
L RG M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D
Sbjct: 655 LPTRGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDE 714
Query: 443 RTLSDYNIQKEXTLH 487
++L+ N+Q +H
Sbjct: 715 KSLAAQNVQPNSLVH 729
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 53 TMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 229
+M I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+
Sbjct: 660 SMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAA 719
Query: 230 YNXQKESTLHLV 265
N Q S +HL+
Sbjct: 720 QNVQPNSLVHLI 731
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 235
M + V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 236 XQKESTLHL 262
+ LHL
Sbjct: 61 ILQNPLLHL 69
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/68 (30%), Positives = 38/68 (55%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 463
M++ V+ +G T ++++ DT+ K KI + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 464 IQKEXTLH 487
I + LH
Sbjct: 61 ILQNPLLH 68
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 226
M IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 227 DYNXQKESTLHLVL 268
+ + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEG---IPPDQQRLIFAGKQLEDGRTLS 454
M+IFVKTL G +EV+ D++ +VK I +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 455 DYNI 466
+ +
Sbjct: 61 ENKV 64
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 226
M IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 227 DYNXQKESTLHLVL 268
+ + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEG---IPPDQQRLIFAGKQLEDGRTLS 454
M+IFVKTL G +EV+ D++ +VK I +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 455 DYNI 466
+ +
Sbjct: 61 ENKV 64
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 44.0 bits (99), Expect = 9e-05
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +2
Query: 44 KETTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRT 220
K TM I + L GK L V +++ ++KAK K + ++ + GK+LED ++
Sbjct: 496 KLQTMKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKS 555
Query: 221 LSDYNXQKESTLHLVLRLRGGMQIFVKTLTGKTITL 328
L++ N Q S +HL LR + + + + L G+ +L
Sbjct: 556 LAEQNVQPNSLVHL-LRTKVHLWPWAQKLPGENKSL 590
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 460
M+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 461 NIQKEXTLH 487
N+Q +H
Sbjct: 560 NVQPNSLVH 568
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 226
M + VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 227 DYNXQKESTLHLVL 268
+ +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEG---IPPDQQRLIFAGKQLEDGRTLS 454
M++ VKTL G + V SDTI VK I D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 455 DYNIQKEXTL 484
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 226
M + VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 227 DYNXQKESTLHLVL 268
+ +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEG---IPPDQQRLIFAGKQLEDGRTLS 454
M++ VKTL G + V SDTI VK I D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 455 DYNIQKEXTL 484
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 226
M + VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 227 DYNXQKESTLHLVL 268
+ +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEG---IPPDQQRLIFAGKQLEDGRTLS 454
M++ VKTL G + V SDTI VK I D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 455 DYNIQKEXTL 484
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 226
M + VKTL G + V +DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 227 DYNXQKESTLHLVL 268
+ +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXD---KEGIPPDQQRLIFAGKQLEDGRTLS 454
M++ VKTL G + V +DTI VK I D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 455 DYNIQKEXTL 484
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 65 FVKTLTGKTITLEVEASDTIXN-VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQ 241
FV+ L GK++TL + +K +I ++ IP QRLI G Q+ +S Q
Sbjct: 12 FVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS----Q 67
Query: 242 KESTLHLVLRLRGG 283
++T++LVL LRGG
Sbjct: 68 SDTTMNLVLSLRGG 81
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDY 460
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 461 NIQKEXTLHXXXRLXGG 511
Q + T++ L GG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLED 211
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQD 52
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLED 439
M +F +T +G T +E+ DT+ +K KI + IP +Q L+F G L+D
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQD 52
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 47 ETTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLED 211
+T + + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D
Sbjct: 33 DTMISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQD 87
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLED 439
+ + ++ +G + T++V DT+ +K KI +G P +Q LIF K L+D
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQD 87
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 62 IFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLED 211
+ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D
Sbjct: 4 VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQD 53
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLED 439
+++ ++ +G + T++V DT+ +K KI +G P +Q LIF K L+D
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQD 53
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLED 211
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLED 439
M +F +T +G +E+ DT+ +K KI + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 37.9 bits (84), Expect = 0.006
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +2
Query: 47 ETTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 226
++T+ + VK GK+I L V T+ ++K+++Q + P Q+LIF GK L + TL
Sbjct: 533 DSTIKLTVK-FGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLK 591
Query: 227 DYNXQKESTLHLVLR--LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 373
+ + L L+ L G +K + + I+ V SD ++ K +
Sbjct: 592 QSDVGSGAKLMLMASQGLHQGEGPILKEASIRPISRTV-VSDKVDQRKPSV 641
Score = 35.1 bits (77), Expect = 0.042
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +2
Query: 311 GKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 466
GK+I L V T++++K+++ + P Q+LIF GK L + TL ++
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDV 595
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 98 LEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLED 211
L +EA+ T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 326 LEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLED 439
L +EA+ T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAG 196
M V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
Score = 35.9 bits (79), Expect = 0.024
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAG 424
M+ V+ L G + +EVE +DT+ VK KI + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 56 MLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAG 196
M V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
Score = 35.9 bits (79), Expect = 0.024
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 284 MQIFVKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAG 424
M+ V+ L G + LEV+ DT+ VK KI + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 35.9 bits (79), Expect = 0.024
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 83 GKTITLEVEA-SDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNXQKESTLH 259
G+ + + V++ S+ + ++K KI + IP ++Q+L L+D +L+ YN L
Sbjct: 715 GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILT 774
Query: 260 LVLRLRGG 283
L LR RGG
Sbjct: 775 LSLRERGG 782
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 35.1 bits (77), Expect = 0.042
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 47 ETTMLIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLED 211
E + + V T++ + + ++A+ T +K I GI +QRL+F GK+ ED
Sbjct: 76 EDLISLRVSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
Score = 34.3 bits (75), Expect = 0.073
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 296 VKTLTGKTITLEVEASDTIENVKAKIXDKEGIPPDQQRLIFAGKQLED 439
V T++ + + ++A+ T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 34.3 bits (75), Expect = 0.073
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 62 IFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 220
+FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 43 VFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 31.9 bits (69), Expect = 0.39
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 326 LEVEASD-TIENVKAKIXDKEGIPPDQQRLIFAGKQLED 439
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKD 52
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 98 LEVEASD-TIXNVKAKIQDKEGIPPDQQRLIFAGKQLED 211
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKD 52
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +2
Query: 209 DGRTLSDYNXQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIXDKE 385
D L + +KES L L+ Q+ +K L TLE+E +E+V+A+I D E
Sbjct: 718 DSSKLKEQLAEKESKLFLLTEKDSKSQVQIKELEATVATLELE----LESVRARIIDLE 772
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 13/67 (19%)
Frame = +2
Query: 113 SDTIXNVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNXQ------KEST 253
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 254 LHLVLRL 274
+H+VLRL
Sbjct: 88 MHIVLRL 94
>At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains
Pfam PF02176: TRAF-type zinc finger; similar to TNF
receptor associated factor 4 (GI:7274404) [Mus musculus]
(GI:7274404); similar to Cysteine rich motif Associated
to Ring and Traf domains protein (mCART1)(GI:1041446)
[Mus musculus]
Length = 192
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -3
Query: 455 QIMYGHLQAVCPQRSIAADLGEFPLCXESWLSHSQWC 345
+I H +CP+R + + EFPL H + C
Sbjct: 73 EIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVC 109
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 77 LTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 214
+TG T E DTI K ++ G P + ++F+G DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,876,117
Number of Sequences: 28952
Number of extensions: 190697
Number of successful extensions: 727
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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