Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0821
         (574 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF519352-1|ABP68461.1|  448|Anopheles gambiae LRIM1 protein.           26   1.0  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   5.3  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   9.3  

>EF519352-1|ABP68461.1|  448|Anopheles gambiae LRIM1 protein.
          Length = 448

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 9/26 (34%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +3

Query: 414 HI*LQYNYIFN-RSSIIFQSIKLIHL 488
           H+ LQYN+I++ +  ++F  +K + L
Sbjct: 195 HLNLQYNFIYBVKGQVVFAKLKTLDL 220


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +1

Query: 49  TLPTSERGSGGDAADSAP 102
           T  T   G GGD ADSAP
Sbjct: 58  TTATIVDGRGGDYADSAP 75


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 74  LAETRRTQLRVSLVLNNNNKPSAPSR 151
           + E R+ +L   +V  + ++PS PSR
Sbjct: 292 IEEMRKVRLAARVVCVDQHRPSIPSR 317


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 470,504
Number of Sequences: 2352
Number of extensions: 8010
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)