Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0814
         (450 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   1.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   1.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   1.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   7.1  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    20   9.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    20   9.4  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 159 HRPWWTRY 182
           +RPWW RY
Sbjct: 71  NRPWWERY 78


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 159 HRPWWTRY 182
           +RPWW RY
Sbjct: 72  NRPWWERY 79


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 159 HRPWWTRY 182
           +RPWW RY
Sbjct: 72  NRPWWERY 79


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 3   RLIQFEHYISSRVKIIKEKLVKTQLLCH 86
           RLI F+        +I  K  K +LLC+
Sbjct: 109 RLIHFDTKCQENSTVIDYKRHKKRLLCY 136


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 3   RLIQFEHYISSRVKIIKEKLVKTQLLCH 86
           RLI F+        +I  K  K +LLC+
Sbjct: 127 RLIHFDTKCQENSTVIDYKRHKKRLLCY 154


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 273 RFSXMQTGTRRLRAHSG 323
           RFS   + T  +R HSG
Sbjct: 58  RFSQSSSVTTHMRTHSG 74


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 273 RFSXMQTGTRRLRAHSG 323
           RFS   + T  +R HSG
Sbjct: 314 RFSQSSSVTTHMRTHSG 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,324
Number of Sequences: 336
Number of extensions: 1320
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)