Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0814
         (450 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   2.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   2.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   2.8  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   3.8  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     22   8.7  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +2

Query: 14  IRTLYKLARKNNQRKI--SENTTSMSLTFQVQN 106
           +R LY LAR N +RKI  S+    ++L  +V+N
Sbjct: 304 LRRLYILARSNLKRKIKASKRRCFLALCDEVEN 336


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 162  RPWWTRYPRPGRDGAFTLQQTP 227
            R W  RY    + G  TL++TP
Sbjct: 1876 RTWGMRYEYDNQSGLLTLKRTP 1897


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 162  RPWWTRYPRPGRDGAFTLQQTP 227
            R W  RY    + G  TL++TP
Sbjct: 1877 RTWGMRYEYDNQSGLLTLKRTP 1898


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 165 PWWTRYPRPGRDGAFTLQQTPSLDAS 242
           P   R  RPGRD +     TP+ D+S
Sbjct: 356 PCILRMSRPGRDLSMEYPPTPTSDSS 381


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 162 RPWWTRY 182
           RPWW RY
Sbjct: 80  RPWWERY 86


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,686
Number of Sequences: 2352
Number of extensions: 5587
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)