Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0814
         (450 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051610-1|AAK93034.1|  396|Drosophila melanogaster GH25564p pro...    56   3e-08
AE014297-1520|AAF54812.1|  396|Drosophila melanogaster CG5641-PA...    56   3e-08

>AY051610-1|AAK93034.1|  396|Drosophila melanogaster GH25564p
           protein.
          Length = 396

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = +1

Query: 241 RPPFDLLLAXPAFPXCKPXP--DDXVLTQALLKRHTELCXXPTDQXAVLSLFTKLQTVLX 414
           R PFDL LA   FP        DD  LT ALLKR+ +L   P++Q A+ +L TK+Q VL 
Sbjct: 27  RHPFDLTLAEVFFPKVPSAGAVDDSALTAALLKRNQDLSPTPSEQTAIGNLVTKVQAVLD 86

Query: 415 XIGVAP*EXAAC 450
            + VAP +   C
Sbjct: 87  NLVVAPGDLTTC 98


>AE014297-1520|AAF54812.1|  396|Drosophila melanogaster CG5641-PA
           protein.
          Length = 396

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = +1

Query: 241 RPPFDLLLAXPAFPXCKPXP--DDXVLTQALLKRHTELCXXPTDQXAVLSLFTKLQTVLX 414
           R PFDL LA   FP        DD  LT ALLKR+ +L   P++Q A+ +L TK+Q VL 
Sbjct: 27  RHPFDLTLAEVFFPKVPSAGAVDDSALTAALLKRNQDLSPTPSEQTAIGNLVTKVQAVLD 86

Query: 415 XIGVAP*EXAAC 450
            + VAP +   C
Sbjct: 87  NLVVAPGDLTTC 98


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,486,623
Number of Sequences: 53049
Number of extensions: 246034
Number of successful extensions: 557
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)