Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0813
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   3.4  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   4.6  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   4.6  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   4.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   6.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.0  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   8.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.0  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
 Frame = -2

Query: 614 LNAGVICTMYLSRIRNLTSVVSAIIFTQ------SLYEHLSQA-*ATNVWKRDRILRADR 456
           LN+G   T + S I N  S +  IIF         L E  S+   A + WK D+ L+   
Sbjct: 253 LNSGYNLTTFGSFIFNANSAIEGIIFFNLAKSWPQLIEKWSRVEMALDNWKNDKSLKRKF 312

Query: 455 Y 453
           Y
Sbjct: 313 Y 313


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 34  PNHELRVNSNTATMLVPPEMMAAQSKLVYQMNKFYNERVANR 159
           P H  ++  N     VP      +S+ +Y +++ YN ++  R
Sbjct: 298 PTHPYQIIKNQQVYDVPWIASFTKSEGLYHLDEVYNNQLLTR 339


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 34  PNHELRVNSNTATMLVPPEMMAAQSKLVYQMNKFYNERVANR 159
           P H  ++  N     VP      +S+ +Y +++ YN ++  R
Sbjct: 298 PTHPYQIIKNQLVYDVPWIASFTKSEGLYHLDEVYNNQLLTR 339


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 34  PNHELRVNSNTATMLVPPEMMAAQSKLVYQMNKFYNERVANR 159
           P H  ++  N     VP      +S+ +Y +++ YN ++  R
Sbjct: 298 PTHPYQIIKNKQVYDVPWIASFTKSEGLYHLDEVYNNQLLTR 339


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 644 AXDRGHRPAHLNAGVICTMYLSRIR 570
           A  R H PAHL AG  C + L  +R
Sbjct: 335 ARSRRHLPAHLVAGT-CFVQLIGMR 358


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 514 KCSYRDCVKMIAETTEVKL 570
           KC  + CVK + E  E  L
Sbjct: 47  KCENQKCVKYLVEDEETSL 65


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 6   CCARACTAAPEP 41
           CC R C++A  P
Sbjct: 191 CCLRTCSSAKRP 202


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 185 CIVFVICAFLLATLSL 138
           CI +  CAF++ T+ L
Sbjct: 145 CIYYFYCAFIIFTVHL 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,405
Number of Sequences: 336
Number of extensions: 3688
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)