Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0812
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   1.8  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   4.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.7  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.7  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   9.7  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 186 QGPRFHAFHRILTKAFIINVLD*F 115
           +GP++    +ILT AF  N+L  F
Sbjct: 119 RGPKWQNRRKILTPAFHFNILQEF 142


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 183 GPRFHAFHRILTKAFIINVLD*F 115
           GP++    +ILT AF  N+L  F
Sbjct: 120 GPKWQNRRKILTPAFHFNILQEF 142


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 427 DLPSELDMPLDGEDEAEV 480
           D+   ++ P+DGED+ +V
Sbjct: 336 DVKRIINQPMDGEDQCDV 353


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 149 LRHSL*MFLTSFDAGYVALA 90
           L HS+ +FLT F+A +  LA
Sbjct: 802 LAHSVGVFLTIFNAAHCYLA 821


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 166  CVKPRTLQWISSVANDDEIKITEDLSIVK 252
            C KP     +  + + D IKI  DL  +K
Sbjct: 1324 CSKPIDEMTVDELRSRDPIKIVADLQKLK 1352


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 166  CVKPRTLQWISSVANDDEIKITEDLSIVK 252
            C KP     +  + + D IKI  DL  +K
Sbjct: 1324 CSKPIDEMTVDELRSRDPIKIVADLQKLK 1352


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 62  ILAIFTVAHCXLFCLTAEAT 3
           IL+IFT     L+C+   AT
Sbjct: 323 ILSIFTYVPMILYCVYTTAT 342


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 62  ILAIFTVAHCXLFCLTAEAT 3
           IL+IFT     L+C+   AT
Sbjct: 48  ILSIFTYVPMILYCVYTTAT 67


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 76  ITTLLFWPFSLLLTV 32
           +T LLFW F  ++ V
Sbjct: 251 LTNLLFWEFDQIVNV 265


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 283 RQIHHPQLFRSS 248
           +Q HH QLF+S+
Sbjct: 16  QQFHHQQLFQSA 27


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 283 RQIHHPQLFRSS 248
           +Q HH QLF+S+
Sbjct: 16  QQFHHQQLFQSA 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,177
Number of Sequences: 336
Number of extensions: 2871
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)