Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0812
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070982-1|AAL48604.1| 306|Drosophila melanogaster RE07882p pro... 97 2e-20
AE014297-436|AAF51889.2| 306|Drosophila melanogaster CG1169-PA ... 97 2e-20
BT016007-1|AAV36892.1| 288|Drosophila melanogaster RE26656p pro... 49 7e-06
AE014297-419|AAF51902.1| 288|Drosophila melanogaster CG1153-PA ... 49 7e-06
AE014297-421|AAF51900.1| 233|Drosophila melanogaster CG15592-PA... 41 0.002
AY070617-1|AAL48088.1| 233|Drosophila melanogaster RE71995p pro... 40 0.003
BT015251-1|AAT94480.1| 390|Drosophila melanogaster LP14110p pro... 39 0.006
AE014297-414|AAN13234.1| 390|Drosophila melanogaster CG1148-PB,... 39 0.006
AE014297-413|AAF51907.2| 390|Drosophila melanogaster CG1148-PA,... 39 0.006
AE014134-2062|AAF53094.1| 282|Drosophila melanogaster CG14925-P... 39 0.006
BT024980-1|ABE01210.1| 505|Drosophila melanogaster IP14820p pro... 38 0.017
AE014296-2204|AAF49873.2| 804|Drosophila melanogaster CG10948-P... 38 0.017
AY118624-1|AAM49993.1| 648|Drosophila melanogaster RE22492p pro... 35 0.092
AE014297-435|AAF51890.3| 648|Drosophila melanogaster CG15598-PA... 35 0.092
AF132170-1|AAD34758.1| 286|Drosophila melanogaster unknown prot... 32 0.65
AE014297-418|AAF51903.2| 312|Drosophila melanogaster CG1151-PA ... 32 0.65
BT010226-1|AAQ23544.1| 2240|Drosophila melanogaster RE72677p pro... 31 1.1
AE014297-2224|AAF55327.2| 2240|Drosophila melanogaster CG14900-P... 31 1.1
AB053260-1|BAB20634.1| 2240|Drosophila melanogaster Cad89D protein. 31 1.1
AY071052-1|AAL48674.1| 280|Drosophila melanogaster RE13893p pro... 30 3.5
AE014297-438|AAF54138.1| 280|Drosophila melanogaster CG15188-PA... 30 3.5
BT029095-1|ABJ17028.1| 554|Drosophila melanogaster IP13321p pro... 29 6.1
AE014298-745|AAF46035.1| 554|Drosophila melanogaster CG15784-PA... 29 6.1
>AY070982-1|AAL48604.1| 306|Drosophila melanogaster RE07882p
protein.
Length = 306
Score = 97.1 bits (231), Expect = 2e-20
Identities = 67/202 (33%), Positives = 95/202 (47%), Gaps = 1/202 (0%)
Frame = +1
Query: 97 ATYPASKLVKNIYNECLSQYSVECVKPRTLQWISSVANDDEIKITEDLSIVKTGTVEDDE 276
A A++L ++Y+ CL SV CV+P+ LQW +S E++ITE LSIV+T E
Sbjct: 28 APQSATQLALDMYHGCLKDLSVSCVRPKALQWFNSALRQPEVRITERLSIVRTA-----E 82
Query: 277 SADPRLAKDPAYEMFDKVDKFLQSHTLRVKVPEEITKSAASEYVPRSLLTD-LPSELDMP 453
+ R + +P +FD +D +L SH+LR++ PE S A VP L+++ L +P
Sbjct: 83 KVESR-SMNPEERLFDDIDSYLGSHSLRIQAPEYFRTSEARSLVPDFLMSNPLTQGGLVP 141
Query: 454 LDGEDEAEVVEGXXXXXXXXXXXXXXSKHGFIKKVILPFLLGLKFKXXXXXXXXXXXXXX 633
L +E G I+K +LPFLLGLK K
Sbjct: 142 LAAANEG---------------------RGMIRKAVLPFLLGLKLKTTVLVPLALGLIAL 180
Query: 634 KTWKAXXXXXXXXXXXXAMVIF 699
KTWKA A+VIF
Sbjct: 181 KTWKAMTLGLLSLVLSGALVIF 202
>AE014297-436|AAF51889.2| 306|Drosophila melanogaster CG1169-PA
protein.
Length = 306
Score = 97.1 bits (231), Expect = 2e-20
Identities = 67/202 (33%), Positives = 95/202 (47%), Gaps = 1/202 (0%)
Frame = +1
Query: 97 ATYPASKLVKNIYNECLSQYSVECVKPRTLQWISSVANDDEIKITEDLSIVKTGTVEDDE 276
A A++L ++Y+ CL SV CV+P+ LQW +S E++ITE LSIV+T E
Sbjct: 28 APQSATQLALDMYHGCLKDLSVSCVRPKALQWFNSALRQPEVRITERLSIVRTA-----E 82
Query: 277 SADPRLAKDPAYEMFDKVDKFLQSHTLRVKVPEEITKSAASEYVPRSLLTD-LPSELDMP 453
+ R + +P +FD +D +L SH+LR++ PE S A VP L+++ L +P
Sbjct: 83 KVESR-SMNPEERLFDDIDSYLGSHSLRIQAPEYFRTSEARSLVPDFLMSNPLTQGGLVP 141
Query: 454 LDGEDEAEVVEGXXXXXXXXXXXXXXSKHGFIKKVILPFLLGLKFKXXXXXXXXXXXXXX 633
L +E G I+K +LPFLLGLK K
Sbjct: 142 LAAANEG---------------------RGMIRKAVLPFLLGLKLKTTVLVPLALGLIAL 180
Query: 634 KTWKAXXXXXXXXXXXXAMVIF 699
KTWKA A+VIF
Sbjct: 181 KTWKAMTLGLLSLVLSGALVIF 202
>BT016007-1|AAV36892.1| 288|Drosophila melanogaster RE26656p
protein.
Length = 288
Score = 48.8 bits (111), Expect = 7e-06
Identities = 24/87 (27%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +1
Query: 118 LVKNIYNECLSQYSVECVKPRTLQWISSVAN-DDEIKITEDLSIVKTGTVEDDESADPRL 294
++ +IY++CL + SV CVK + ++ V D+ +TE +++V++ E+A +
Sbjct: 39 IMDSIYSDCLRKDSVSCVKYKLFSFVDKVLGARDQFALTEGVTVVRSPDAPQQEAA-RSI 97
Query: 295 AKDPAYE--MFDKVDKFLQSHTLRVKV 369
+ D ++E +++ FL SHT++V++
Sbjct: 98 SGDESFESLALNRISSFLNSHTIKVEL 124
>AE014297-419|AAF51902.1| 288|Drosophila melanogaster CG1153-PA
protein.
Length = 288
Score = 48.8 bits (111), Expect = 7e-06
Identities = 24/87 (27%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +1
Query: 118 LVKNIYNECLSQYSVECVKPRTLQWISSVAN-DDEIKITEDLSIVKTGTVEDDESADPRL 294
++ +IY++CL + SV CVK + ++ V D+ +TE +++V++ E+A +
Sbjct: 39 IMDSIYSDCLRKDSVSCVKYKLFSFVDKVLGARDQFALTEGVTVVRSPDAPQQEAA-RSI 97
Query: 295 AKDPAYE--MFDKVDKFLQSHTLRVKV 369
+ D ++E +++ FL SHT++V++
Sbjct: 98 SGDESFESLALNRISSFLNSHTIKVEL 124
>AE014297-421|AAF51900.1| 233|Drosophila melanogaster CG15592-PA
protein.
Length = 233
Score = 40.7 bits (91), Expect = 0.002
Identities = 30/121 (24%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Frame = +1
Query: 52 MARIIVLLSIVAF-ASATYPASKLVKN---IYNECLSQYSVECVKPRTLQWISSVANDDE 219
M + + L +++A A+AT A L+ + + +C + V C+K R L + A + +
Sbjct: 1 MFKFVCLFALIASTAAATSEADSLLTSALKMVKDCGERSMVLCMKERALHYFD--AENGD 58
Query: 220 IKITEDLSIVKTGTVEDDESADPRL------AKDPAYE--MFDKVDKFLQSHTLRVKVPE 375
+++TE +++VKT + S + A++ + + ++V +F +HTL+ KVP+
Sbjct: 59 VRLTEGIALVKTDEIPVGRSLNEMQLPEEVEAREAEVDSLLVERVARFFGTHTLQFKVPK 118
Query: 376 E 378
+
Sbjct: 119 D 119
>AY070617-1|AAL48088.1| 233|Drosophila melanogaster RE71995p
protein.
Length = 233
Score = 39.9 bits (89), Expect = 0.003
Identities = 30/121 (24%), Positives = 63/121 (52%), Gaps = 12/121 (9%)
Frame = +1
Query: 52 MARIIVLLSIVAF-ASATYPASKLVKN---IYNECLSQYSVECVKPRTLQWISSVANDDE 219
M + L +++A A+AT A L+ + + +C + V C+K R L + A + +
Sbjct: 1 MFEFVCLFALIASTAAATSEADSLLTSALKMVKDCGERSMVLCMKERALHYFD--AENGD 58
Query: 220 IKITEDLSIVKTGTVEDDESADPRL------AKDPAYE--MFDKVDKFLQSHTLRVKVPE 375
+++TE +++VKT + S + A++ + + ++V +F +HTL+ KVP+
Sbjct: 59 VRLTEGIALVKTDEIPVGRSLNEMQLPEEVEAREAEVDSLLVERVARFFGTHTLQFKVPK 118
Query: 376 E 378
+
Sbjct: 119 D 119
>BT015251-1|AAT94480.1| 390|Drosophila melanogaster LP14110p
protein.
Length = 390
Score = 39.1 bits (87), Expect = 0.006
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Frame = +1
Query: 136 NECLSQYSVECVKPRTLQWISSVANDDEIKITEDLSIVKTGTVED--------DESADPR 291
+ CL EC K + L + D+ K+++ +V+ + + S +PR
Sbjct: 89 SNCLGGDLSECFKTQALNTFDEIFFKDQYKLSDFARVVRLPETQQRSLLQEPFEYSEEPR 148
Query: 292 LAKDPAYEMFD----KVDKFLQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPLD 459
D ++ + ++F++S L V+ PEE+T+ A Y R + D+ ELD+ D
Sbjct: 149 GDDDEWNQLLKYGLRRAERFIKSTALEVEWPEELTE--AGRYEARFIGNDIDGELDLIDD 206
Query: 460 GE 465
G+
Sbjct: 207 GQ 208
>AE014297-414|AAN13234.1| 390|Drosophila melanogaster CG1148-PB,
isoform B protein.
Length = 390
Score = 39.1 bits (87), Expect = 0.006
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Frame = +1
Query: 136 NECLSQYSVECVKPRTLQWISSVANDDEIKITEDLSIVKTGTVED--------DESADPR 291
+ CL EC K + L + D+ K+++ +V+ + + S +PR
Sbjct: 89 SNCLGGDLSECFKTQALNTFDEIFFKDQYKLSDFARVVRLPETQQRSLLQEPFEYSEEPR 148
Query: 292 LAKDPAYEMFD----KVDKFLQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPLD 459
D ++ + ++F++S L V+ PEE+T+ A Y R + D+ ELD+ D
Sbjct: 149 GDDDEWNQLLKYGLRRAERFIKSTALEVEWPEELTE--AGRYEARFIGNDIDGELDLIDD 206
Query: 460 GE 465
G+
Sbjct: 207 GQ 208
>AE014297-413|AAF51907.2| 390|Drosophila melanogaster CG1148-PA,
isoform A protein.
Length = 390
Score = 39.1 bits (87), Expect = 0.006
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Frame = +1
Query: 136 NECLSQYSVECVKPRTLQWISSVANDDEIKITEDLSIVKTGTVED--------DESADPR 291
+ CL EC K + L + D+ K+++ +V+ + + S +PR
Sbjct: 89 SNCLGGDLSECFKTQALNTFDEIFFKDQYKLSDFARVVRLPETQQRSLLQEPFEYSEEPR 148
Query: 292 LAKDPAYEMFD----KVDKFLQSHTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPLD 459
D ++ + ++F++S L V+ PEE+T+ A Y R + D+ ELD+ D
Sbjct: 149 GDDDEWNQLLKYGLRRAERFIKSTALEVEWPEELTE--AGRYEARFIGNDIDGELDLIDD 206
Query: 460 GE 465
G+
Sbjct: 207 GQ 208
>AE014134-2062|AAF53094.1| 282|Drosophila melanogaster CG14925-PA
protein.
Length = 282
Score = 39.1 bits (87), Expect = 0.006
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Frame = +1
Query: 106 PASKLVKNIYNECLSQYS-VECVKPRTLQWISSVANDDEIKITEDLSIVKTGTVEDD--- 273
P LV+ +Y++C + + C+K + L +S + D IKI + L++ K E +
Sbjct: 49 PEMALVRRVYDDCQDKNDFIGCLKQKALHALSRALDQDSIKIVDGLALEKQNQSETESIL 108
Query: 274 -ESADPRLAKDPA---YEMFDKVDKFLQSHTLRV 363
D R + + + K DK +++HTL++
Sbjct: 109 GSLTDARQFGNLSPIDRALLSKADKLMRTHTLKI 142
>BT024980-1|ABE01210.1| 505|Drosophila melanogaster IP14820p
protein.
Length = 505
Score = 37.5 bits (83), Expect = 0.017
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Frame = +1
Query: 85 AFASATYPASKLVKNIYNECLSQYSVECVKPRTLQWISSVAN-DDEIKITEDLS-IVKTG 258
A AS AS L + + C S+ E ++P+ I + DD+++I E S +V+
Sbjct: 309 AGASNASNASNLDYSSGDSC-SREGTEIIRPQAEPEIIDIDKVDDDVRIIEHQSGVVEIH 367
Query: 259 TVEDDESADPR--LAKDPAYE-MFDKVDKFLQSHTLRVKVPEEITKSAASEYVPRSLL 423
+EDDE +P K A E + + V K T+ E+I AA E +SL+
Sbjct: 368 EIEDDEKQEPAKDSTKSKANESIMENVSKSNHEETINKSSKEQIPTVAAEEVTFKSLV 425
>AE014296-2204|AAF49873.2| 804|Drosophila melanogaster CG10948-PC,
isoform C protein.
Length = 804
Score = 37.5 bits (83), Expect = 0.017
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Frame = +1
Query: 85 AFASATYPASKLVKNIYNECLSQYSVECVKPRTLQWISSVAN-DDEIKITEDLS-IVKTG 258
A AS AS L + + C S+ E ++P+ I + DD+++I E S +V+
Sbjct: 608 AGASNASNASNLDYSSGDSC-SREGTEIIRPQAEPEIIDIDKVDDDVRIIEHQSGVVEIH 666
Query: 259 TVEDDESADPR--LAKDPAYE-MFDKVDKFLQSHTLRVKVPEEITKSAASEYVPRSLL 423
+EDDE +P K A E + + V K T+ E+I AA E +SL+
Sbjct: 667 EIEDDEKQEPAKDSTKSKANESIMENVSKSNHEETINKSSKEQIPTVAAEEVTFKSLV 724
>AY118624-1|AAM49993.1| 648|Drosophila melanogaster RE22492p
protein.
Length = 648
Score = 35.1 bits (77), Expect = 0.092
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Frame = +1
Query: 112 SKLVKNIYNECLSQYSVECVKPRTLQWISSVANDDEIKITEDLSIVKTGT-----VEDDE 276
++L + +C + V C + ++ +V + ++ +T+ L K E +E
Sbjct: 153 NELWDGLVRDCYLKPDVSCFQKNVFSYLDNVLDVQDVNVTQRLKFFKNQVDYQVDKEKEE 212
Query: 277 SADPRLA--KDPAYE----MFDKVDKFLQSHTLRVKVPEEITKSAASEYVPRSL 420
++ R A + P E ++ K KF +H L V +PE + A PR++
Sbjct: 213 HSEARAASAETPIEEVTSALYGKSIKFAMTHDLEVDLPEVMFNGATFRISPRAI 266
>AE014297-435|AAF51890.3| 648|Drosophila melanogaster CG15598-PA
protein.
Length = 648
Score = 35.1 bits (77), Expect = 0.092
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Frame = +1
Query: 112 SKLVKNIYNECLSQYSVECVKPRTLQWISSVANDDEIKITEDLSIVKTGT-----VEDDE 276
++L + +C + V C + ++ +V + ++ +T+ L K E +E
Sbjct: 153 NELWDGLVRDCYLKPDVSCFQKNVFSYLDNVLDVQDVNVTQRLKFFKNQVDYQVDKEKEE 212
Query: 277 SADPRLA--KDPAYE----MFDKVDKFLQSHTLRVKVPEEITKSAASEYVPRSL 420
++ R A + P E ++ K KF +H L V +PE + A PR++
Sbjct: 213 HSEARAASAETPIEEVTSALYGKSIKFAMTHDLEVDLPEVMFNGATFRISPRAI 266
>AF132170-1|AAD34758.1| 286|Drosophila melanogaster unknown
protein.
Length = 286
Score = 32.3 bits (70), Expect = 0.65
Identities = 19/86 (22%), Positives = 41/86 (47%)
Frame = +1
Query: 52 MARIIVLLSIVAFASATYPASKLVKNIYNECLSQYSVECVKPRTLQWISSVANDDEIKIT 231
+A +LL ++ A++ + +CL S+ C++ + SV ++ +I++
Sbjct: 5 VATACILLLAAGISADPVKAAEEQPGAFAQCLESDSISCLQLTLFRKAKSVFDNPQIELF 64
Query: 232 EDLSIVKTGTVEDDESADPRLAKDPA 309
+S+VK+ +S D LA + A
Sbjct: 65 GGVSLVKSNEGRQGKSLDNSLAVEAA 90
>AE014297-418|AAF51903.2| 312|Drosophila melanogaster CG1151-PA
protein.
Length = 312
Score = 32.3 bits (70), Expect = 0.65
Identities = 19/86 (22%), Positives = 41/86 (47%)
Frame = +1
Query: 52 MARIIVLLSIVAFASATYPASKLVKNIYNECLSQYSVECVKPRTLQWISSVANDDEIKIT 231
+A +LL ++ A++ + +CL S+ C++ + SV ++ +I++
Sbjct: 31 VATACILLLAAGISADPVKAAEEQPGAFAQCLESDSISCLQLTLFRKAKSVFDNPQIELF 90
Query: 232 EDLSIVKTGTVEDDESADPRLAKDPA 309
+S+VK+ +S D LA + A
Sbjct: 91 GGVSLVKSNEGRQGKSLDNSLAVEAA 116
>BT010226-1|AAQ23544.1| 2240|Drosophila melanogaster RE72677p protein.
Length = 2240
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 291 TGQGSGLR--NVRQSGQVSPESYS*GESSRGNNEKCCFRVRAKVSLD 425
TGQ SG+ + R+ + SP+S+ G S RGNN + AK L+
Sbjct: 2078 TGQDSGVEFLSSRELYEASPDSFQHGGSKRGNNTEVLCPRHAKAHLE 2124
>AE014297-2224|AAF55327.2| 2240|Drosophila melanogaster CG14900-PA
protein.
Length = 2240
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 291 TGQGSGLR--NVRQSGQVSPESYS*GESSRGNNEKCCFRVRAKVSLD 425
TGQ SG+ + R+ + SP+S+ G S RGNN + AK L+
Sbjct: 2078 TGQDSGVEFLSSRELYETSPDSFQHGGSKRGNNTEVLCPRHAKAHLE 2124
>AB053260-1|BAB20634.1| 2240|Drosophila melanogaster Cad89D protein.
Length = 2240
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 291 TGQGSGLR--NVRQSGQVSPESYS*GESSRGNNEKCCFRVRAKVSLD 425
TGQ SG+ + R+ + SP+S+ G S RGNN + AK L+
Sbjct: 2078 TGQDSGVEFLSSRELYETSPDSFQHGGSKRGNNTEVLCPRHAKAHLE 2124
>AY071052-1|AAL48674.1| 280|Drosophila melanogaster RE13893p
protein.
Length = 280
Score = 29.9 bits (64), Expect = 3.5
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 103 YPASKLVKNIYNECLSQYSVECVKPRTLQWISSVANDDE 219
+ + +L+ I ++C ++ C+K + L ++ +VAN +E
Sbjct: 37 HSSDELISTIVDKCFHANAMHCLKEKVLTYLDTVANVEE 75
>AE014297-438|AAF54138.1| 280|Drosophila melanogaster CG15188-PA
protein.
Length = 280
Score = 29.9 bits (64), Expect = 3.5
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 103 YPASKLVKNIYNECLSQYSVECVKPRTLQWISSVANDDE 219
+ + +L+ I ++C ++ C+K + L ++ +VAN +E
Sbjct: 37 HSSDELISTIVDKCFHANAMHCLKEKVLTYLDTVANVEE 75
>BT029095-1|ABJ17028.1| 554|Drosophila melanogaster IP13321p
protein.
Length = 554
Score = 29.1 bits (62), Expect = 6.1
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = +3
Query: 528 QEQTRFHQEGYPAFPAGS*IQSFCSRSLGASPHRSEDLE---GSYSWSHFPWFIWXHGH 695
+EQT +E + S S S S +S SED E Y W PW HGH
Sbjct: 121 EEQTAAGEEPSNTSSSSSSSSSSSSSSSSSSSSSSEDEEVFYNGYGWISNPWRRGPHGH 179
>AE014298-745|AAF46035.1| 554|Drosophila melanogaster CG15784-PA
protein.
Length = 554
Score = 29.1 bits (62), Expect = 6.1
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = +3
Query: 528 QEQTRFHQEGYPAFPAGS*IQSFCSRSLGASPHRSEDLE---GSYSWSHFPWFIWXHGH 695
+EQT +E + S S S S +S SED E Y W PW HGH
Sbjct: 121 EEQTAAGEEPSNTSSSSSSSSSSSSSSSSSSSSSSEDEEVFYNGYGWISNPWRRGPHGH 179
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,850,436
Number of Sequences: 53049
Number of extensions: 589918
Number of successful extensions: 1675
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1671
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -