Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0806
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029034-1|ABJ16967.1| 324|Drosophila melanogaster IP02858p pro... 265 5e-71
BT004491-1|AAO42655.1| 327|Drosophila melanogaster GM13757p pro... 265 5e-71
AE014296-3380|AAF51613.1| 416|Drosophila melanogaster CG6020-PA... 265 5e-71
AY051740-1|AAK93164.1| 514|Drosophila melanogaster LD26701p pro... 31 2.2
AE014296-1092|AAF50679.2| 514|Drosophila melanogaster CG10274-P... 31 2.2
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein. 29 6.8
AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p pro... 29 6.8
AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like fac... 29 6.8
AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box bin... 29 6.8
AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-P... 29 6.8
AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-P... 29 6.8
D28749-1|BAA05942.1| 1507|Drosophila melanogaster DE-cadherin pr... 29 8.9
AY089344-1|AAL90082.1| 922|Drosophila melanogaster AT16542p pro... 29 8.9
AE013599-3112|AAF46659.1| 1507|Drosophila melanogaster CG3722-PA... 29 8.9
>BT029034-1|ABJ16967.1| 324|Drosophila melanogaster IP02858p
protein.
Length = 324
Score = 265 bits (649), Expect = 5e-71
Identities = 130/223 (58%), Positives = 157/223 (70%), Gaps = 1/223 (0%)
Frame = +2
Query: 2 LNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMR 181
LN E +PK L +K S W SKY GE VR+ +P ATIIR +DIYGSEDRFLR + R
Sbjct: 88 LNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWR 147
Query: 182 SHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEVYQAVGPKRYLLADLVDWF 361
MPL+ G TVKQPV+VSDVAQ I+NAA+D D+ +YQAVGPKRY L++LVDWF
Sbjct: 148 RQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRIYQAVGPKRYQLSELVDWF 207
Query: 362 YKLMRKDEKWGGYIRYDMKYDPILPLKVALVNAISPAYPLGNLHWEGIEREATSDNVVIG 541
++LMRKD+K GY+RYDM++DP LK L + I P P+G LH IEREA +D V+ G
Sbjct: 208 HRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGLHPARIEREAVTDKVLTG 267
Query: 542 VPTLEDLGVTLTHMEDQVPWELKPFRAHQYYMGSAWE-SSPKP 667
VPTLEDLGVTLT ME QVPWEL+P+RA YY E +P P
Sbjct: 268 VPTLEDLGVTLTTMEQQVPWELRPYRAALYYDAELGEFETPSP 310
>BT004491-1|AAO42655.1| 327|Drosophila melanogaster GM13757p
protein.
Length = 327
Score = 265 bits (649), Expect = 5e-71
Identities = 130/223 (58%), Positives = 157/223 (70%), Gaps = 1/223 (0%)
Frame = +2
Query: 2 LNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMR 181
LN E +PK L +K S W SKY GE VR+ +P ATIIR +DIYGSEDRFLR + R
Sbjct: 91 LNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWR 150
Query: 182 SHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEVYQAVGPKRYLLADLVDWF 361
MPL+ G TVKQPV+VSDVAQ I+NAA+D D+ +YQAVGPKRY L++LVDWF
Sbjct: 151 RQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRIYQAVGPKRYQLSELVDWF 210
Query: 362 YKLMRKDEKWGGYIRYDMKYDPILPLKVALVNAISPAYPLGNLHWEGIEREATSDNVVIG 541
++LMRKD+K GY+RYDM++DP LK L + I P P+G LH IEREA +D V+ G
Sbjct: 211 HRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGLHPARIEREAVTDKVLTG 270
Query: 542 VPTLEDLGVTLTHMEDQVPWELKPFRAHQYYMGSAWE-SSPKP 667
VPTLEDLGVTLT ME QVPWEL+P+RA YY E +P P
Sbjct: 271 VPTLEDLGVTLTTMEQQVPWELRPYRAALYYDAELGEFETPSP 313
>AE014296-3380|AAF51613.1| 416|Drosophila melanogaster CG6020-PA
protein.
Length = 416
Score = 265 bits (649), Expect = 5e-71
Identities = 130/223 (58%), Positives = 157/223 (70%), Gaps = 1/223 (0%)
Frame = +2
Query: 2 LNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMR 181
LN E +PK L +K S W SKY GE VR+ +P ATIIR +DIYGSEDRFLR + R
Sbjct: 180 LNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWR 239
Query: 182 SHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEVYQAVGPKRYLLADLVDWF 361
MPL+ G TVKQPV+VSDVAQ I+NAA+D D+ +YQAVGPKRY L++LVDWF
Sbjct: 240 RQFRSMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRIYQAVGPKRYQLSELVDWF 299
Query: 362 YKLMRKDEKWGGYIRYDMKYDPILPLKVALVNAISPAYPLGNLHWEGIEREATSDNVVIG 541
++LMRKD+K GY+RYDM++DP LK L + I P P+G LH IEREA +D V+ G
Sbjct: 300 HRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGLHPARIEREAVTDKVLTG 359
Query: 542 VPTLEDLGVTLTHMEDQVPWELKPFRAHQYYMGSAWE-SSPKP 667
VPTLEDLGVTLT ME QVPWEL+P+RA YY E +P P
Sbjct: 360 VPTLEDLGVTLTTMEQQVPWELRPYRAALYYDAELGEFETPSP 402
>AY051740-1|AAK93164.1| 514|Drosophila melanogaster LD26701p
protein.
Length = 514
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 529 CGDRRAHP*GLGRHLDTHGRPGAMGTETFSRPSVLHGIGLGEFPETXTLPPV 684
CG + +P L +HL TH + ET+ + V G GE + PPV
Sbjct: 164 CGKKFLYPKSLTKHLKTHEKRVLRAIETYRQRQVEMGETPGEQFDNPPAPPV 215
>AE014296-1092|AAF50679.2| 514|Drosophila melanogaster CG10274-PA
protein.
Length = 514
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 529 CGDRRAHP*GLGRHLDTHGRPGAMGTETFSRPSVLHGIGLGEFPETXTLPPV 684
CG + +P L +HL TH + ET+ + V G GE + PPV
Sbjct: 164 CGKKFLYPKSLTKHLKTHEKRVLRAIETYRQRQVEMGETPGEQFDNPPAPPV 215
>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
Length = 1715
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 137 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 307
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 1202 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 1256
>AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p
protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 137 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 307
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
>AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like factor
protein.
Length = 537
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 137 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 307
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 24 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 78
>AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box
binding protein-relatedfactor 2 protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 137 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 307
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
>AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-PD,
isoform D protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 137 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 307
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
>AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-PA,
isoform A protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 137 GSEDRFLRSLVNKMRSHSNLMPLYKNGLATVKQPVFVSDVAQGIVNAARDDDTKCEV 307
GS++ FL S NK ++ + NGL T K + +V Q I DD+ K EV
Sbjct: 119 GSKNMFLTSSENK--ANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKEV 173
>D28749-1|BAA05942.1| 1507|Drosophila melanogaster DE-cadherin
protein.
Length = 1507
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 449 LVNAISPAYPLGNLHWEGIEREATSDNVVIGVPTLEDLGVTLTHMEDQVPW 601
LV + P G+ +W+ + + D V V T++++ VTL + D P+
Sbjct: 682 LVKTLDRDPPNGHKNWQVLIKANDEDGVGTTVSTVKEVTVTLKDINDNAPF 732
>AY089344-1|AAL90082.1| 922|Drosophila melanogaster AT16542p
protein.
Length = 922
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -2
Query: 410 RSECIHPIFRPSSLVCKTNQPNRQVSSVLAQRLGRLHI*CRRRARHSRYPERRPTQTQ 237
R EC+H S CK + P R S ++L L C +R R + + + QT+
Sbjct: 766 RPECVHCEGEHSEQSCKQHSP-RSCMSSSPRQLSVLETVCEKRTRTVTFEDEKGGQTK 822
>AE013599-3112|AAF46659.1| 1507|Drosophila melanogaster CG3722-PA
protein.
Length = 1507
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 449 LVNAISPAYPLGNLHWEGIEREATSDNVVIGVPTLEDLGVTLTHMEDQVPW 601
LV + P G+ +W+ + + D V V T++++ VTL + D P+
Sbjct: 682 LVKTLDRDPPNGHKNWQVLIKANDEDGVGTTVSTVKEVTVTLKDINDNAPF 732
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,150,051
Number of Sequences: 53049
Number of extensions: 854168
Number of successful extensions: 2353
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2353
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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