Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0804
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...   120   3e-29
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     25   3.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.0  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    23   9.2  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   9.2  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   9.2  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   9.2  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score =  120 bits (290), Expect = 3e-29
 Identities = 57/65 (87%), Positives = 61/65 (93%)
 Frame = +1

Query: 427 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 606
           +AVITVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAA+AYGLDK   GERNVLIFDL
Sbjct: 1   DAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDL 60

Query: 607 GGGTF 621
           GGGTF
Sbjct: 61  GGGTF 65



 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +2

Query: 620 FDVSILTIEDG 652
           FDVSILTI++G
Sbjct: 65  FDVSILTIDEG 75


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 643 RGWYLRGEIHRPATPT 690
           R W+LR   HRP T T
Sbjct: 105 RPWWLRPPFHRPTTST 120


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +3

Query: 6    NGKSTRSRNRSGYHVLLRWCLPAREGGDHR--QRPG 107
            +GK  RS +   +++LL    P REG  H+  Q PG
Sbjct: 1802 DGKYKRSYSYEPHNLLLSNLFPPREGFHHKAVQLPG 1837


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +3

Query: 417 NCAECSYHGSRVLQ*LSKTSHKR-CRY 494
           NCA C  HG ++        HKR C+Y
Sbjct: 40  NCARCRNHGLKI----GLKGHKRYCKY 62


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +3

Query: 417 NCAECSYHGSRVLQ*LSKTSHKR-CRY 494
           NCA C  HG ++        HKR C+Y
Sbjct: 40  NCARCRNHGLKI----GLKGHKRYCKY 62


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +3

Query: 417 NCAECSYHGSRVLQ*LSKTSHKR-CRY 494
           NCA C  HG ++        HKR C+Y
Sbjct: 40  NCARCRNHGLKI----GLKGHKRYCKY 62


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +3

Query: 417 NCAECSYHGSRVLQ*LSKTSHKR-CRY 494
           NCA C  HG ++        HKR C+Y
Sbjct: 40  NCARCRNHGLKI----GLKGHKRYCKY 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,206
Number of Sequences: 2352
Number of extensions: 17983
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)