Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0803
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 341 4e-94
AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 333 9e-92
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 227 9e-60
U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical pr... 178 3e-45
U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 172 3e-43
U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical pr... 125 4e-29
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 36 0.041
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 32 0.50
Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical pr... 31 1.2
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 31 1.2
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 30 1.5
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 30 1.5
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 30 2.0
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 2.7
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 29 2.7
U39853-2|AAK39225.1| 771|Caenorhabditis elegans Kinase suppress... 29 3.5
U38820-1|AAA92436.1| 771|Caenorhabditis elegans KSR-1 protein. 29 3.5
S80647-1|AAB35769.1| 771|Caenorhabditis elegans KSR-1 protein. 29 3.5
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical pr... 29 4.7
U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical
protein C14F11.1a protein.
Length = 414
Score = 341 bits (837), Expect = 4e-94
Identities = 154/249 (61%), Positives = 191/249 (76%)
Frame = +2
Query: 2 IWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHACAH 181
I+ PTPTWGNH I + K+YRY+D T GFD GAL DI++IPEGS ILLHACAH
Sbjct: 139 IYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQIPEGSTILLHACAH 198
Query: 182 NPTGVDPKPSDWEQLSKVIKERKLFPFFDMAYQGFATGDVDNDAFAVRLFVKEGHQVMLA 361
NPTGVDP W+++S ++K+R LF FFDMAYQGFA+GDVDNDAFAVR FV++GH ++L+
Sbjct: 199 NPTGVDPSRDQWKKISDIVKKRNLFVFFDMAYQGFASGDVDNDAFAVRYFVEQGHNIVLS 258
Query: 362 QSFAKNMGLYGERAGALTFLCGDEATAAKVMSQVKIMVRVMYSNPPLYGARLVQEILTNA 541
QSFAKNMGLYGER GA + + D AA+V SQVKI++R +YSNPP++GAR+ IL +
Sbjct: 259 QSFAKNMGLYGERVGAFSVVTSDADEAARVASQVKILIRPLYSNPPVHGARIASRILADP 318
Query: 542 ELKKQWLGDVKQMADRIITMRSQLRAGIEGAGNPHPWQHITDQIGMFCFTGLKPEQVERL 721
L KQWLGDVK MADRIITMR+ L+ + G+ W+HIT+QIGMFCFTG+ P+QVE+L
Sbjct: 319 ALNKQWLGDVKLMADRIITMRTTLKDLLAKEGSTRNWEHITNQIGMFCFTGINPQQVEKL 378
Query: 722 TKXXHVYLT 748
K VYLT
Sbjct: 379 IKEHSVYLT 387
>AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical
protein C44E4.3 protein.
Length = 419
Score = 333 bits (818), Expect = 9e-92
Identities = 148/249 (59%), Positives = 193/249 (77%)
Frame = +2
Query: 2 IWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHACAH 181
++ PTPTW NH + L + YRY++ +T GFD++GALEDISK+PEGS+ILLHACAH
Sbjct: 144 LFYPTPTWANHLPVFRNSGLSIQPYRYYNQETLGFDVEGALEDISKMPEGSVILLHACAH 203
Query: 182 NPTGVDPKPSDWEQLSKVIKERKLFPFFDMAYQGFATGDVDNDAFAVRLFVKEGHQVMLA 361
NPTGVDP W++LS+V+KERK+ PFFDMAYQGFA+GDVD+DAFA+R F+++GH V++A
Sbjct: 204 NPTGVDPTKEQWKKLSQVLKERKILPFFDMAYQGFASGDVDDDAFALRHFIEQGHNVLVA 263
Query: 362 QSFAKNMGLYGERAGALTFLCGDEATAAKVMSQVKIMVRVMYSNPPLYGARLVQEILTNA 541
QSFAKNMGLYGER GA + +C A +V SQ++I++R M S PPL+GAR+ IL+N
Sbjct: 264 QSFAKNMGLYGERVGAFSIVCDSAEEAIRVGSQMRIIIRPMISMPPLHGARIASRILSNP 323
Query: 542 ELKKQWLGDVKQMADRIITMRSQLRAGIEGAGNPHPWQHITDQIGMFCFTGLKPEQVERL 721
ELKK WL DVK MADRI +MR+ L+ G++ G+ W HIT+QIGMFCFTG+ +QV++L
Sbjct: 324 ELKKSWLEDVKLMADRIKSMRTALKDGLKAEGSTLNWDHITNQIGMFCFTGINEKQVQKL 383
Query: 722 TKXXHVYLT 748
K VYLT
Sbjct: 384 IKEHSVYLT 392
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 227 bits (554), Expect = 9e-60
Identities = 104/249 (41%), Positives = 152/249 (61%), Gaps = 1/249 (0%)
Frame = +2
Query: 2 IWLPTPTWGNHPQICNTLNLPH-KKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHACA 178
+++ PTWGNH + Y ++D ++ L D+ PE S+I+LH CA
Sbjct: 126 VYVSNPTWGNHKLVFKKAGFTTVADYTFWDYDNKRVHIEKFLSDLESAPEKSVIILHGCA 185
Query: 179 HNPTGVDPKPSDWEQLSKVIKERKLFPFFDMAYQGFATGDVDNDAFAVRLFVKEGHQVML 358
HNPTG+DP W+ +++VIK + LF FFD+AYQGFA+GD DA+A+R FV +G ++++
Sbjct: 186 HNPTGMDPTQEQWKLVAEVIKRKNLFTFFDIAYQGFASGDPAADAWAIRYFVDQGMEMVV 245
Query: 359 AQSFAKNMGLYGERAGALTFLCGDEATAAKVMSQVKIMVRVMYSNPPLYGARLVQEILTN 538
+QSFAKN GLY ER G LT + + A A SQ+ +++R +SNPP +GAR+V ++LT
Sbjct: 246 SQSFAKNFGLYNERVGNLTVVVNNPAVIAGFQSQMSLVIRANWSNPPAHGARIVHKVLTT 305
Query: 539 AELKKQWLGDVKQMADRIITMRSQLRAGIEGAGNPHPWQHITDQIGMFCFTGLKPEQVER 718
++QW ++ M+ RI MR+ L + G P W HI QIGMF +TGL QV+
Sbjct: 306 PARREQWNQSIQAMSSRIKQMRAALLRHLMDLGTPGTWDHIIQQIGMFSYTGLTSAQVDH 365
Query: 719 LTKXXHVYL 745
L V+L
Sbjct: 366 LIANHKVFL 374
>U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical
protein C14E2.2 protein.
Length = 364
Score = 178 bits (434), Expect = 3e-45
Identities = 85/240 (35%), Positives = 142/240 (59%), Gaps = 1/240 (0%)
Frame = +2
Query: 29 NHPQICNTLNLPH-KKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHACAHNPTGVDPK 205
+H IC +Y +++ + D++ L D+ P S+I+L ACA+NPTG+D
Sbjct: 91 SHHLICKKAGFTTVAEYTFWNYEEKCVDIEKLLSDLEFAPAKSVIILPACAYNPTGMDLS 150
Query: 206 PSDWEQLSKVIKERKLFPFFDMAYQGFATGDVDNDAFAVRLFVKEGHQVMLAQSFAKNMG 385
+ W+Q+++VIK ++LFPFFD++YQG A+GD D++A+R FV +G ++ +AQSFAKN+
Sbjct: 151 ENQWKQIARVIKRKRLFPFFDISYQGCASGDPAADSWAIRHFVSDGIELFVAQSFAKNLF 210
Query: 386 LYGERAGALTFLCGDEATAAKVMSQVKIMVRVMYSNPPLYGARLVQEILTNAELKKQWLG 565
R G LT + + A + SQ+ + +R+ P +GA +V ++L+ + ++ W+
Sbjct: 211 FTNPRLGNLTVVVNNAAVIPGIKSQMSLAIRINAFYPTAFGATIVHKVLSTSARREFWIQ 270
Query: 566 DVKQMADRIITMRSQLRAGIEGAGNPHPWQHITDQIGMFCFTGLKPEQVERLTKXXHVYL 745
++Q++ RI MR+ L + P W HI Q GMF +TGL QV+ L + V+L
Sbjct: 271 SIQQISSRIKQMRTALFDVLSALKTPGSWDHIIRQTGMFSYTGLTSTQVDHLVRNHKVFL 330
>U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical
protein T01C8.4 protein.
Length = 357
Score = 172 bits (418), Expect = 3e-43
Identities = 81/189 (42%), Positives = 120/189 (63%)
Frame = +2
Query: 179 HNPTGVDPKPSDWEQLSKVIKERKLFPFFDMAYQGFATGDVDNDAFAVRLFVKEGHQVML 358
+NPTG+DP W Q+++VIK++ LF FF +A QG A+GD D DA+AVR FV++G ++++
Sbjct: 138 YNPTGMDPTREQWIQMAQVIKQKNLFTFFHIADQGLASGDADADAWAVRFFVEQGLEMIV 197
Query: 359 AQSFAKNMGLYGERAGALTFLCGDEATAAKVMSQVKIMVRVMYSNPPLYGARLVQEILTN 538
+QSF+KN GLY +R G+LT + + A + SQ+ ++ +SNPP YGAR+V EIL +
Sbjct: 198 SQSFSKNFGLYNDRVGSLTVIVNKPSHIANLKSQLTLVNVSNFSNPPAYGARIVHEILKS 257
Query: 539 AELKKQWLGDVKQMADRIITMRSQLRAGIEGAGNPHPWQHITDQIGMFCFTGLKPEQVER 718
+ ++QW +K MA RI R +L + W IT Q G+F +TGL P QV+
Sbjct: 258 PKYREQWQNSIKMMAFRIKKTRQELIRELNMLQTSGKWDRITQQSGLFSYTGLTPCQVDH 317
Query: 719 LTKXXHVYL 745
L +YL
Sbjct: 318 LIAHHKIYL 326
>U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical
protein C14F11.1b protein.
Length = 297
Score = 125 bits (301), Expect = 4e-29
Identities = 54/90 (60%), Positives = 66/90 (73%)
Frame = +2
Query: 2 IWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHACAH 181
I+ PTPTWGNH I + K+YRY+D T GFD GAL DI++IPEGS ILLHACAH
Sbjct: 139 IYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQIPEGSTILLHACAH 198
Query: 182 NPTGVDPKPSDWEQLSKVIKERKLFPFFDM 271
NPTGVDP W+++S ++K+R LF FFDM
Sbjct: 199 NPTGVDPSRDQWKKISDIVKKRNLFVFFDM 228
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 35.5 bits (78), Expect = 0.041
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 493 PSAVRRPPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRG---RRQPAP 648
PSA + PP A + R++ ARRR++ P + PAPRR R R PAP
Sbjct: 351 PSASKSPPPAPKRAKSRSKSPPARRRRS---PSASKSPPAPRRRRSPSKSRSPAP 402
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 532 HQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAPLATHHRPDRHVLLHRTQ 699
+Q++ Q+ ++ G P P +H+ QPA + H P +H H+TQ
Sbjct: 502 YQQQQQQHAQHQQNMSGYPQQQQQPQHPHQHQ---QPASVPMQHHPQQHPSQHQTQ 554
>Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical
protein F07A5.6 protein.
Length = 293
Score = 31.1 bits (67), Expect = 0.87
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 484 VLQPSAVRRPPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAP---RRHRGRRQPAP 648
+L+P+ RR P DTH RR+ P++ AP RR GR+ P P
Sbjct: 15 LLEPTCRRRLPMPPDTHLRRSSSPRILPTPPPLSPEYRCPSAAPHLERRPSGRQLPRP 72
>Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical
protein F25B3.3 protein.
Length = 654
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = -1
Query: 345 CPSLTKRRTAKASLSTSPVAKP*YAMSKNGNNFLSLITLESCSQSLGLGSTP---VGLCA 175
C ++ RT A +++ KP + + + ++ GSTP +GL +
Sbjct: 572 CKRSSRPRTVSAVVTSPTTEKPTCSTKLSPPKLKDIRPQSESTEYYNSGSTPDEEIGLVS 631
Query: 174 HACNRIMEPSGIFDISSSA 118
AC + E + DISS++
Sbjct: 632 LACEEVFEDDDLADISSAS 650
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = +1
Query: 493 PSAVRRPPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAPLATHHRPD 672
PS RR R+ D R + R + P D PRR GRR P P + P+
Sbjct: 83 PSRERRRSRSRDRGAPRRRSRTRSRDRRRSPPRRRDRRTPPRRSPGRRSP-PRSRLPGPE 141
Query: 673 R 675
R
Sbjct: 142 R 142
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Frame = +1
Query: 505 RRPPRAGD--THQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAPLATHHRPDRH 678
R PPR D T RR+ + R GP+ D P RH + T D+
Sbjct: 111 RSPPRRRDRRTPPRRSPGRRSPPRSRLPGPERRDVMPFNPRHSPPKNAKLELTAEERDQR 170
Query: 679 VLLHRTQARAGRASD 723
LL AR R D
Sbjct: 171 TLLIMQIARDTRPRD 185
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class
glutamate receptor protein1 protein.
Length = 1025
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -1
Query: 198 STPVGL---CAHACNRIMEPSGIFD-ISSSAPCKSKPLVLGSK*RYFLCGKLRV 49
+TP+G CA N ++E S IFD I S P S PL L + YF C L +
Sbjct: 410 TTPIGSPSQCAELGNTVVEWS-IFDKIVVSGPWYSCPLTLENSTEYFCCAGLAI 462
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -1
Query: 198 STPVGL---CAHACNRIMEPSGIFD-ISSSAPCKSKPLVLGSK*RYFLCGKLRV 49
+TP+G CA N ++E S IFD I S P S PL L + YF C L +
Sbjct: 410 TTPIGSPSQCAELGNTVVEWS-IFDKIVVSGPWYSCPLTLENSTEYFCCAGLAI 462
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +1
Query: 511 PPRAGDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRGRRQPAPLATHHRP 669
PPR + + A RR D HD++ +P R+R RR RP
Sbjct: 160 PPRPSRKIREESPSARNRRSPPRTRRDRHDSDNSPPRNRSRRDSDNSPPRRRP 212
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +3
Query: 30 TTRKSATPSTCRTRNTVTSIPRPMVSICREHSRIYQKFPKVPLFCCTRAHTTPPVLTPSP 209
T S + ST T TS P+ +V++ + + K KVP+ T PP + PS
Sbjct: 488 TYTTSTSTSTTTTLPPTTSTPKIVVNLTPIYPDMLMKANKVPMIPAYGIWTIPPHVPPSS 547
Query: 210 ATGNN 224
+N
Sbjct: 548 KEFDN 552
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +2
Query: 545 LKKQWLGDVKQMADRIITMRSQLRAGIEGAGNPHPWQHITDQIGMFCFTGLKPEQVERL 721
LKKQ + + + D++ + +R GI P+Q +++ + + CF L+P L
Sbjct: 797 LKKQEVTGLPEKIDQLRSRLDDIRVGIANMHEVAPFQIVSNTV-LDCFANLRPTSASNL 854
>U39853-2|AAK39225.1| 771|Caenorhabditis elegans Kinase suppressor
of activatedras protein 1 protein.
Length = 771
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 452 MSQVKIMVRVMYSNPPLYGARLVQEILTNA 541
M Q ++ R YSN P +GA + Q+I T A
Sbjct: 1 MMQTQVASRAGYSNLPQFGAGIAQDIKTQA 30
>U38820-1|AAA92436.1| 771|Caenorhabditis elegans KSR-1 protein.
Length = 771
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 452 MSQVKIMVRVMYSNPPLYGARLVQEILTNA 541
M Q ++ R YSN P +GA + Q+I T A
Sbjct: 1 MMQTQVASRAGYSNLPQFGAGIAQDIKTQA 30
>S80647-1|AAB35769.1| 771|Caenorhabditis elegans KSR-1 protein.
Length = 771
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 452 MSQVKIMVRVMYSNPPLYGARLVQEILTNA 541
M Q ++ R YSN P +GA + Q+I T A
Sbjct: 1 MMQTQVASRAGYSNLPQFGAGIAQDIKTQA 30
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 562 RRRKADGGPDHHDAEPAPRRHRGRRQPAPLATHHRPDRHV 681
+RR D PD DA + ++ R PAPL TH + HV
Sbjct: 782 KRRVCDTRPDCLDA--SDEQNCADRAPAPLPTHSQQHHHV 819
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 562 RRRKADGGPDHHDAEPAPRRHRGRRQPAPLATHHRPDRHV 681
+RR D PD DA + ++ R PAPL TH + HV
Sbjct: 782 KRRVCDTRPDCLDA--SDEQNCADRAPAPLPTHSQQHHHV 819
>Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical
protein R03A10.4b protein.
Length = 424
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 134 SKIPEGSIILLHACAHNPTGVDPKPSDWEQLSKVIKERKLFPFFDMAYQ 280
SKI E + +L+ HNPTG + E+L+++ K+ L D Y+
Sbjct: 170 SKINEKTKMLVINNPHNPTGKLFSRHELEKLAEIAKKHNLIVIADEVYE 218
>Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical
protein R03A10.4a protein.
Length = 441
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 134 SKIPEGSIILLHACAHNPTGVDPKPSDWEQLSKVIKERKLFPFFDMAYQ 280
SKI E + +L+ HNPTG + E+L+++ K+ L D Y+
Sbjct: 187 SKINEKTKMLVINNPHNPTGKLFSRHELEKLAEIAKKHNLIVIADEVYE 235
>U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical
protein B0310.4 protein.
Length = 112
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = +1
Query: 523 GDTHQRRTQKAMARRRKADGGPDHHDAEPAPRRHRG--RRQPAPLATHHRPDRH-VLLHR 693
G+TH+ T + R K G H HRG R HR + H HR
Sbjct: 18 GETHRGETHRGETHRGKTHRGETHRGETHRGETHRGETHRGETHRGKTHRGETHRGETHR 77
Query: 694 TQARAG 711
+ R G
Sbjct: 78 GETRRG 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,844,810
Number of Sequences: 27780
Number of extensions: 421772
Number of successful extensions: 1582
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1574
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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