Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0802
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122092-1|AAM52604.1|  191|Drosophila melanogaster GH04557p pro...    29   6.8  
AE014298-2203|AAF48501.1|  191|Drosophila melanogaster CG8206-PA...    29   6.8  

>AY122092-1|AAM52604.1|  191|Drosophila melanogaster GH04557p
           protein.
          Length = 191

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 196 AVHVTKHTNFSLKNSQPLKIIIAQKKHQEFHFSGKKYKLAGNTT 65
           AV +T      LK+S+P  + I +      HF+ K++ L G+T+
Sbjct: 36  AVPLTNDAEQHLKSSRPAPLSIPRSILDACHFTAKQFDLGGSTS 79


>AE014298-2203|AAF48501.1|  191|Drosophila melanogaster CG8206-PA
           protein.
          Length = 191

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 196 AVHVTKHTNFSLKNSQPLKIIIAQKKHQEFHFSGKKYKLAGNTT 65
           AV +T      LK+S+P  + I +      HF+ K++ L G+T+
Sbjct: 36  AVPLTNDAEQHLKSSRPAPLSIPRSILDACHFTAKQFDLGGSTS 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,266,347
Number of Sequences: 53049
Number of extensions: 538907
Number of successful extensions: 1874
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1874
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)