Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0802
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73971-1|CAA98249.2|  929|Caenorhabditis elegans Hypothetical pr...    31   0.87 
AF224743-1|AAF82248.1|  929|Caenorhabditis elegans leucine-rich ...    31   0.87 
Z82075-6|CAN99721.1| 1047|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z82075-5|CAD54162.1| 1021|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z82075-4|CAB04932.1| 1023|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AL021489-6|CAN99715.1| 1047|Caenorhabditis elegans Hypothetical ...    30   1.5  
AL021489-5|CAD54166.1| 1021|Caenorhabditis elegans Hypothetical ...    30   1.5  
AL021489-4|CAA16371.1| 1023|Caenorhabditis elegans Hypothetical ...    30   1.5  
AF016449-11|AAG23992.1|  353|Caenorhabditis elegans Serpentine r...    30   2.0  
AF039719-3|AAB96756.1|  730|Caenorhabditis elegans Blistered cut...    29   2.7  
AF016449-9|AAG23993.2|  351|Caenorhabditis elegans Serpentine re...    29   4.7  
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF016449-13|AAG24003.1|  350|Caenorhabditis elegans Serpentine r...    28   6.2  

>Z73971-1|CAA98249.2|  929|Caenorhabditis elegans Hypothetical
           protein C50H2.1 protein.
          Length = 929

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 626 YLRGVWWGTARGCQCVAFLSFFA 558
           Y   VWW T  GC+   FL+ FA
Sbjct: 498 YRHAVWWQTGWGCRAAGFLAVFA 520


>AF224743-1|AAF82248.1|  929|Caenorhabditis elegans leucine-rich
           repeat-containingG protein-coupled receptor protein.
          Length = 929

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 626 YLRGVWWGTARGCQCVAFLSFFA 558
           Y   VWW T  GC+   FL+ FA
Sbjct: 498 YRHAVWWQTGWGCRAAGFLAVFA 520


>Z82075-6|CAN99721.1| 1047|Caenorhabditis elegans Hypothetical
           protein W07A8.2c protein.
          Length = 1047

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 21  VALCPRCQSSCELFRVVFPANL 86
           VALC RC+ + ELFR VFP N+
Sbjct: 269 VALCERCRENPELFR-VFPKNV 289


>Z82075-5|CAD54162.1| 1021|Caenorhabditis elegans Hypothetical
           protein W07A8.2b protein.
          Length = 1021

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 21  VALCPRCQSSCELFRVVFPANL 86
           VALC RC+ + ELFR VFP N+
Sbjct: 243 VALCERCRENPELFR-VFPKNV 263


>Z82075-4|CAB04932.1| 1023|Caenorhabditis elegans Hypothetical
           protein W07A8.2a protein.
          Length = 1023

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 21  VALCPRCQSSCELFRVVFPANL 86
           VALC RC+ + ELFR VFP N+
Sbjct: 245 VALCERCRENPELFR-VFPKNV 265


>AL021489-6|CAN99715.1| 1047|Caenorhabditis elegans Hypothetical
           protein W07A8.2c protein.
          Length = 1047

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 21  VALCPRCQSSCELFRVVFPANL 86
           VALC RC+ + ELFR VFP N+
Sbjct: 269 VALCERCRENPELFR-VFPKNV 289


>AL021489-5|CAD54166.1| 1021|Caenorhabditis elegans Hypothetical
           protein W07A8.2b protein.
          Length = 1021

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 21  VALCPRCQSSCELFRVVFPANL 86
           VALC RC+ + ELFR VFP N+
Sbjct: 243 VALCERCRENPELFR-VFPKNV 263


>AL021489-4|CAA16371.1| 1023|Caenorhabditis elegans Hypothetical
           protein W07A8.2a protein.
          Length = 1023

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 21  VALCPRCQSSCELFRVVFPANL 86
           VALC RC+ + ELFR VFP N+
Sbjct: 245 VALCERCRENPELFR-VFPKNV 265


>AF016449-11|AAG23992.1|  353|Caenorhabditis elegans Serpentine
           receptor, class t protein7 protein.
          Length = 353

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 614 VWWGTARGCQCVAFLSF 564
           + WG + GC C+A+LSF
Sbjct: 276 ILWGWSSGCMCIAYLSF 292


>AF039719-3|AAB96756.1|  730|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformb protein.
          Length = 730

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 440 PQTTQTLQSARHELKDNWRKVVRRKKTHWETRL 538
           P T+Q + S  H+L     +VV R + HWE  L
Sbjct: 641 PATSQGVLSRVHQLTSQGDEVVERIRNHWEVTL 673


>AF016449-9|AAG23993.2|  351|Caenorhabditis elegans Serpentine
           receptor, class t protein9 protein.
          Length = 351

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 623 LRGVWWGTARGCQCVAFLSF 564
           L  + WG + GC C+A+L+F
Sbjct: 271 LSHIIWGWSSGCMCIAYLTF 290


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 482 KDNWRKVVRRKKTHWETRLRPRYLTSQRN*GKPHTDTRARSPT 610
           +++ R+ + RKK H E  LR + + S     K  +  R RSP+
Sbjct: 267 EESRRREIERKKRHEEAELRQKAIASVAARAKSGSPRRRRSPS 309


>AF016449-13|AAG24003.1|  350|Caenorhabditis elegans Serpentine
           receptor, class t protein8 protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 608 WGTARGCQCVAFLSF 564
           WG + GC C+A+L+F
Sbjct: 278 WGWSSGCMCIAYLAF 292


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,789,116
Number of Sequences: 27780
Number of extensions: 287958
Number of successful extensions: 744
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)