Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0796
         (750 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ILU2 Cluster: Putative uncharacterized protein; n=2; ...    37   0.46 
UniRef50_Q8I4R7 Cluster: Tryptophanyl-tRNA synthetase, putative;...    37   0.46 
UniRef50_A0EFM0 Cluster: Chromosome undetermined scaffold_93, wh...    36   1.4  
UniRef50_Q8IJJ2 Cluster: Putative uncharacterized protein; n=3; ...    35   1.9  
UniRef50_Q8QVF3 Cluster: VP2; n=2; Coltivirus|Rep: VP2 - Eyach v...    33   7.5  
UniRef50_Q7RQA7 Cluster: Putative uncharacterized protein PY0119...    33   7.5  
UniRef50_Q8I436 Cluster: Putative uncharacterized protein PFE032...    33   9.9  

>UniRef50_Q8ILU2 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 1474

 Score = 37.1 bits (82), Expect = 0.46
 Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
 Frame = +2

Query: 455  THMSRLHT*SYKNDNFSH*RENNRTSHKNCT--LTN*LIN--CFLNNYFQVN*WYFCRCY 622
            TH  +++  + KN + ++  +NN T+ K C   L N + N  C+ NN+   N +YF    
Sbjct: 1280 THTHQMYHDNRKNTSINN-DKNNYTNEKVCCNYLNNNVYNNYCYDNNFMDNNNYYFDDNM 1338

Query: 623  FN*TNNKHFSLLRR-YDENIFDFHLANEMRFLLANYAKNSW 742
            +   NN + +     Y++N +  H+ +   F+ ANY  N++
Sbjct: 1339 YQRNNNNYINENHAFYNDNRYINHMND--HFINANYMNNNY 1377


>UniRef50_Q8I4R7 Cluster: Tryptophanyl-tRNA synthetase, putative;
           n=2; Plasmodium|Rep: Tryptophanyl-tRNA synthetase,
           putative - Plasmodium falciparum (isolate 3D7)
          Length = 570

 Score = 37.1 bits (82), Expect = 0.46
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
 Frame = +2

Query: 419 KWMYVREERYLLTHMSRLHT*SYKND-----NFSH*RENNRTSHKNCTLTN*LINCFLNN 583
           K  Y+ +E  L  +  R H  +Y ND     NFSH ++NN   H N  + N +++ + NN
Sbjct: 441 KLSYIYDEHQLFINNQRTH--NYLNDFTNNPNFSHYKQNNINPHFNQNIINKILHSYNNN 498

Query: 584 Y 586
           Y
Sbjct: 499 Y 499


>UniRef50_A0EFM0 Cluster: Chromosome undetermined scaffold_93, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_93,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 2346

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +1

Query: 280 FRICAFFLYVYVSSQT*INLLHSLLSMNFIGINIKHY 390
           F  C +FL  ++  Q  +NL HSL  +NF+ I+  H+
Sbjct: 699 FSACVYFLQQFIEQQNELNLNHSLQDLNFLKISQVHF 735


>UniRef50_Q8IJJ2 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1934

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +2

Query: 569 CFLNNYFQVN*WYFCRCYFN*TNNK---HFSLLRRYDENIFDFHLANEMRFLLANY 727
           C +N+YF  N  Y    Y N T NK     S++  Y+E I+  +L N + F +  Y
Sbjct: 144 CLMNSYFNKNDMYMISTYMNSTRNKISQILSIICLYNEPIYFRYLLNFLIFFVCEY 199


>UniRef50_Q8QVF3 Cluster: VP2; n=2; Coltivirus|Rep: VP2 - Eyach
           virus
          Length = 1275

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = -3

Query: 730 RVICQQKAHFIS*MKVKNIFIVPT*QRKMFIIRSIKIAATEIPLIY-LKIIVKKTIYKLV 554
           +++C   A F+  +KV++   VPT  + +F +   K+A    P +Y   + +K  +  ++
Sbjct: 526 KIVCDIMAPFVDGLKVEDSLGVPTPSKLVFALLGAKVALILTPNLYDYNLHLKAQLVTMI 585

Query: 553 SQC 545
           S C
Sbjct: 586 SSC 588


>UniRef50_Q7RQA7 Cluster: Putative uncharacterized protein PY01194;
           n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01194 - Plasmodium yoelii yoelii
          Length = 2120

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +2

Query: 572 FLNN--YFQVN*WYFCRCYFN*TNNKHFSLLRRYDENIFDFHLANEMRFLLANY 727
           +LNN  Y ++N  Y   C     N+ H + +  YDENI  F   NE  + L NY
Sbjct: 358 YLNNKQYDEIN-VYTSNCKITFENDNHDANINEYDENIILFINKNEFFYNLINY 410


>UniRef50_Q8I436 Cluster: Putative uncharacterized protein PFE0325w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFE0325w - Plasmodium falciparum
           (isolate 3D7)
          Length = 3008

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
 Frame = +2

Query: 428 YVREERYLLTHMSRLHT*SYKNDNFSH*RENNRTSHKNCTLTN*LINCFLNNYFQVN*WY 607
           ++  ++Y + H   +   + KN N +    NN  ++KN + T+ +I+   NNY   N  Y
Sbjct: 90  HIHNDKYKMEHEEFISLENNKNSNTNDDHNNNNNNNKNKSSTSYIIH---NNYIDNNNKY 146

Query: 608 FCRCYFN*T-NNKHFSL-LRRYDENI 679
           F           K+FSL +++  ENI
Sbjct: 147 FHHTKSKQNGEKKNFSLNIKKDQENI 172


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,866,740
Number of Sequences: 1657284
Number of extensions: 13396207
Number of successful extensions: 23225
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23199
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)