Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0796
         (750 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0094 + 12277756-12278574,12280314-12280418,12280487-122805...    29   3.9  

>08_02_0094 +
           12277756-12278574,12280314-12280418,12280487-12280543,
           12280969-12281041,12281525-12281703,12281788-12281961,
           12282041-12282326,12282433-12282509,12282599-12282668,
           12282751-12282822,12282920-12283155,12283240-12283374,
           12283466-12283761,12284237-12284408,12284510-12284608,
           12284704-12284835,12284950-12285050,12285426-12285615,
           12285723-12285761
          Length = 1103

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 158 HLKMADEVENLRTYEWSMILQ*W 90
           +L + +++ENLR Y+WS  +  W
Sbjct: 367 YLTVFEDIENLRNYDWSKFIYDW 389


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,180,188
Number of Sequences: 37544
Number of extensions: 311934
Number of successful extensions: 435
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)