Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0795
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71186-3|CAA94914.1|  222|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z92826-8|CAI79117.1|  325|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z81475-12|CAI79149.1|  325|Caenorhabditis elegans Hypothetical p...    28   6.2  
Z78015-7|CAB01438.1|  381|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z77657-10|CAB01152.1|  381|Caenorhabditis elegans Hypothetical p...    28   8.1  

>Z71186-3|CAA94914.1|  222|Caenorhabditis elegans Hypothetical
           protein F23D12.4 protein.
          Length = 222

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -3

Query: 238 NNSDVVLRSIIYTINRISVLTIQAVPN-VRIIG 143
           NNSD V + II  ++R+S L I   PN  R++G
Sbjct: 186 NNSDEVFKCIIDEVSRVSSLQIWGFPNGERLLG 218


>Z92826-8|CAI79117.1|  325|Caenorhabditis elegans Hypothetical
           protein C18D11.7 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 92  IFNKLRDHADGINNIMLTNDPHV 160
           +FNKLRD + GI   +L  DP V
Sbjct: 150 VFNKLRDSSSGIEITLLDVDPEV 172


>Z81475-12|CAI79149.1|  325|Caenorhabditis elegans Hypothetical
           protein C18D11.7 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 92  IFNKLRDHADGINNIMLTNDPHV 160
           +FNKLRD + GI   +L  DP V
Sbjct: 150 VFNKLRDSSSGIEITLLDVDPEV 172


>Z78015-7|CAB01438.1|  381|Caenorhabditis elegans Hypothetical
           protein F08H9.9 protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -3

Query: 331 GTHVGTFGPLTIFY*LLYVKSCNAFFSVIIINNSDVVLRSIIYTI-NRISVLTIQAVPN 158
           G H  T    +  Y + Y  + + F+S+   NN+ + L+   Y + N I  LTI   PN
Sbjct: 163 GLHTRTGNITSPGYPVQYYNNLDCFYSITSPNNTYITLQLDPYLVENAIDYLTIYDGPN 221


>Z77657-10|CAB01152.1|  381|Caenorhabditis elegans Hypothetical
           protein F08H9.9 protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -3

Query: 331 GTHVGTFGPLTIFY*LLYVKSCNAFFSVIIINNSDVVLRSIIYTI-NRISVLTIQAVPN 158
           G H  T    +  Y + Y  + + F+S+   NN+ + L+   Y + N I  LTI   PN
Sbjct: 163 GLHTRTGNITSPGYPVQYYNNLDCFYSITSPNNTYITLQLDPYLVENAIDYLTIYDGPN 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,559,451
Number of Sequences: 27780
Number of extensions: 312558
Number of successful extensions: 565
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)