Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0794
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0038 - 21769936-21770199,21770785-21771198,21771274-217714... 46 3e-05
01_06_1395 + 37010446-37010895 46 3e-05
02_05_0042 + 25351648-25351724,25351983-25352010,25352311-253523... 34 0.11
06_01_0989 + 7672764-7672904,7673017-7673067,7673176-7673296,767... 33 0.15
08_02_1409 - 26864544-26864658,26864787-26864916,26864953-268652... 32 0.46
11_06_0702 + 26432798-26432890,26434021-26434416 30 1.4
08_02_0721 + 20401217-20401360,20401689-20401809,20401969-204020... 30 1.4
11_06_0349 + 22565405-22566279,22567774-22569772,22570360-225704... 29 3.2
05_05_0254 - 23638544-23640090,23640280-23640408,23640619-236406... 29 4.2
02_05_0684 - 30880527-30880753,30881952-30882124,30882687-308827... 28 5.6
01_06_0251 - 27885236-27885775,27887383-27887529 28 7.4
07_03_1233 + 25057139-25057262,25058340-25058911 27 9.8
07_01_0736 - 5600201-5600374,5600455-5600563,5601075-5601196,560... 27 9.8
04_01_0585 - 7608929-7609157,7609559-7609746 27 9.8
02_05_0868 + 32342967-32343915,32344389-32344447 27 9.8
02_05_0363 - 28297295-28298167 27 9.8
01_01_0558 + 4098383-4098510,4100462-4100572,4100765-4100853,410... 27 9.8
>05_05_0038 -
21769936-21770199,21770785-21771198,21771274-21771434,
21771544-21771607,21771682-21771864,21772355-21772520,
21773397-21773528,21775085-21775599
Length = 632
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +3
Query: 219 KEGWLQKRGEHIRNWRDRYFILFDTGDLVGFKTQPERNNYRDPLNKFTVRDCQIM--AVD 392
+ GWL K+GE+I+ WR R+F+L G L FK P V C + A D
Sbjct: 40 RTGWLNKQGEYIKTWRRRWFVL-KQGRLFWFKDAAVTRG-SVPRGVIPVATCLTVKGAED 97
Query: 393 K-PRPYTFTIRGLQWTTVIERNFSVDNEKEREEWVKAI 503
R + F + T F D+EKE+EEW+ +I
Sbjct: 98 VINRQFAFELS----TPTDTMYFIADSEKEKEEWINSI 131
>01_06_1395 + 37010446-37010895
Length = 149
Score = 45.6 bits (103), Expect = 3e-05
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +3
Query: 219 KEGWLQKRGEHIRNWRDRYFILFDTGDLVGFKTQPERNNYRDPLNKFTVRDCQIM--AVD 392
+ GWL K+GE+I+ WR R+F+L G L FK P V C + A D
Sbjct: 24 RAGWLTKQGEYIKTWRRRWFVL-KQGRLFWFKDSGV-TRASVPRGVIPVATCLTVKGAED 81
Query: 393 K-PRPYTFTIRGLQWTTVIERNFSVDNEKEREEWVKAI 503
R + F + T F D+EKE+EEW+ +I
Sbjct: 82 TLNRQFAFELS----TPAETMYFIADSEKEKEEWINSI 115
>02_05_0042 +
25351648-25351724,25351983-25352010,25352311-25352373,
25352880-25352945,25353029-25353076,25353338-25353379,
25353499-25353714,25354066-25354188,25354352-25354564,
25354930-25355016,25355259-25355507,25356386-25356507,
25357135-25357225,25358467-25358882,25359489-25359609
Length = 653
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 216 VKEGWLQKRGEHIRNWRDRYFILFDTGDL 302
+K+G+L KR E+ R W+ R+F+L G L
Sbjct: 184 IKQGYLFKRSENSREWKRRFFVLDSHGTL 212
>06_01_0989 +
7672764-7672904,7673017-7673067,7673176-7673296,
7673406-7673510,7673963-7674024,7674398-7674515,
7674596-7674932,7675389-7675536,7675632-7675733,
7675824-7675943,7676436-7676519,7676622-7676749,
7677351-7677435,7677566-7677713,7677971-7678047,
7678187-7678243,7678423-7678561,7678642-7678796,
7679003-7679116,7679208-7679275,7679830-7679996,
7680245-7680453
Length = 911
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/63 (22%), Positives = 31/63 (49%)
Frame = +3
Query: 216 VKEGWLQKRGEHIRNWRDRYFILFDTGDLVGFKTQPERNNYRDPLNKFTVRDCQIMAVDK 395
+ G+L K+ W R+F+L + +G+ + E ++R + T+ +C + V++
Sbjct: 581 ITAGYLLKKSAKTNGWSRRWFVLNEKSGKLGYTKKQEERHFRGVI---TLEECNLEEVEE 637
Query: 396 PRP 404
P
Sbjct: 638 EEP 640
>08_02_1409 -
26864544-26864658,26864787-26864916,26864953-26865283,
26866507-26866626,26867489-26867821,26867915-26868001,
26868093-26868320,26868434-26868565,26868649-26868861,
26869376-26869417,26869829-26869894,26870230-26870274,
26870367-26870429,26870757-26870827,26871149-26871249,
26871458-26871534,26872415-26872459
Length = 732
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 216 VKEGWLQKRGEHIR-NWRDRYFILFDTGDLVGFKTQPER 329
+++G+L KR ++R +W+ R+F+L G L ++ Q R
Sbjct: 245 IRQGYLSKRSSNLRADWKRRFFVLDSRGMLYYYRKQINR 283
>11_06_0702 + 26432798-26432890,26434021-26434416
Length = 162
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +2
Query: 83 RTSIGENCAAARSKQTCGPHGQQFVIKQL---VARREGHGDGG--ARDHREGRMAAET 241
R + GE AA K T P G + ++ ARR+ GDGG ARDH R A+T
Sbjct: 30 RDAGGEEAAATPGKATARPAGARSRRERRWRRPARRKEKGDGGEVARDHGRMREGAKT 87
>08_02_0721 +
20401217-20401360,20401689-20401809,20401969-20402067,
20402790-20402851,20403680-20403797,20404004-20404343,
20404435-20404582,20405043-20405144,20405240-20405359,
20405812-20405895,20405974-20406101,20408314-20408389,
20408556-20408631,20408800-20408876,20408975-20409031,
20409411-20409555,20409634-20409806,20409928-20410054,
20410090-20410192,20410492-20410688,20410946-20411097
Length = 882
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = +3
Query: 216 VKEGWLQKRGEHIRNWRDRYFILFDTGDLVGFKTQPERNNYRDPLN 353
+ G+L K+ +W +R+F+L + +G+ + E ++R +N
Sbjct: 537 ITAGFLFKKRAKANDWSNRWFVLNERSGKLGYTKKQEERHFRGVIN 582
>11_06_0349 +
22565405-22566279,22567774-22569772,22570360-22570478,
22570835-22571117
Length = 1091
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/18 (50%), Positives = 17/18 (94%)
Frame = +3
Query: 462 VDNEKEREEWVKAIREVA 515
VD++++R++W+K +REVA
Sbjct: 59 VDHDEQRQDWMKQVREVA 76
>05_05_0254 -
23638544-23640090,23640280-23640408,23640619-23640626,
23641442-23642682
Length = 974
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 567 RQHRTSMLNWALRCSVARQLLGWPSPILL 481
R +T +NWA +AR GWPS +LL
Sbjct: 480 RPKQTVTINWAQAQLLARLAKGWPSLLLL 508
>02_05_0684 -
30880527-30880753,30881952-30882124,30882687-30882754,
30882860-30882973,30883281-30883438,30883516-30883654,
30883851-30883907,30884064-30884140,30884324-30884462,
30884590-30884668,30885047-30885174,30885269-30885352,
30886072-30886191,30886274-30886375,30886470-30886617,
30887404-30887749,30887851-30887968,30888309-30888370,
30888798-30888947,30889049-30889169,30889269-30889319,
30889427-30889567
Length = 933
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/60 (18%), Positives = 29/60 (48%)
Frame = +3
Query: 216 VKEGWLQKRGEHIRNWRDRYFILFDTGDLVGFKTQPERNNYRDPLNKFTVRDCQIMAVDK 395
+ G+L K+ W R+F+L + +G+ + E ++R + + +C + +++
Sbjct: 594 ITAGYLLKKSAKNNEWSKRWFVLNEKSGKLGYTKKQEERHFRGVI---VLEECNLEEIEE 650
>01_06_0251 - 27885236-27885775,27887383-27887529
Length = 228
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 176 RREGHGDGGARDHREG 223
RRE HG GG HR+G
Sbjct: 200 RREAHGGGGTSPHRQG 215
>07_03_1233 + 25057139-25057262,25058340-25058911
Length = 231
Score = 27.5 bits (58), Expect = 9.8
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Frame = -2
Query: 319 WVLKPTRSPVSN-NMKYRSRQFRMCSPRFCSHPSFTMIPGAAIAMALAPRH*LFDNKLL- 146
W R P + ++ YR R C F +HP TM+PG I L +H L +L+
Sbjct: 142 WPCTLCRGPFQHGHLAYRCGA-RRCG--FAAHPLCTMLPG-EIRSPLHRKHALTHTELML 197
Query: 145 -------PVRPARLFAPCRRAIFTYTGSH 80
P AR+ + CRR T H
Sbjct: 198 IPSGPCTPAEMARVCSVCRRDCSTVRTRH 226
>07_01_0736 -
5600201-5600374,5600455-5600563,5601075-5601196,
5602859-5602935,5603349-5603487,5604306-5604618,
5605084-5605394,5607245-5609141,5609239-5609374,
5609519-5609607,5610424-5610507,5611112-5611191,
5611312-5611446,5612340-5612585
Length = 1303
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -2
Query: 280 MKYRSRQFRMCSPRFCSHPSFTMIPGAAIA 191
++ S+ ++C P C+HP T++P A
Sbjct: 595 VQIHSKCVKLCLPTACAHPEGTLLPSPVCA 624
>04_01_0585 - 7608929-7609157,7609559-7609746
Length = 138
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/25 (60%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 164 QLVARREGHGDGGARDHRE-GRMAA 235
+ VARRE GDGG R E G MAA
Sbjct: 35 EAVARREVDGDGGKRQPTEGGEMAA 59
>02_05_0868 + 32342967-32343915,32344389-32344447
Length = 335
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 567 RQHRTSMLNWALRCSVARQLLGWPSPILLFLFRC 466
R HRT + W +C A +++ +PS +F RC
Sbjct: 12 RHHRTCRMYWCYQCGRAIRIISYPSTD-VFCPRC 44
>02_05_0363 - 28297295-28298167
Length = 290
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 266 SPIPDVFTTFLQPSFLHDDPGRRHRHGPRASP 171
S +P F L P + PGRRHRH P
Sbjct: 224 STMPSGFAVCLSP-LVRPSPGRRHRHAHPPDP 254
>01_01_0558 + 4098383-4098510,4100462-4100572,4100765-4100853,
4100974-4101107,4101337-4101435,4102619-4102994,
4103883-4104337,4104419-4107409
Length = 1460
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -3
Query: 579 PCRDRQHRTSMLNWALRCSVARQLLGWPSPILLFLFRC-QLRSSFQ*QWS-TAGHVW*KC 406
PC + H +ML W C V ++ +P + L + C L+ QWS + W C
Sbjct: 1058 PCLEELHFENMLEWRSWCGVEKECF-FPKLLTLTIMDCPSLQMLPVEQWSDQVNYKWFPC 1116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,364,735
Number of Sequences: 37544
Number of extensions: 377912
Number of successful extensions: 1143
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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