Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0794
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    27   0.39 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   0.90 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   3.6  
AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive ...    24   3.6  

>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +3

Query: 390 DKPRPYTFTI--RGLQWTTVIERNFSVDNEKEREEWV 494
           D+ RP+  T    G     ++ERN + D E + +EW+
Sbjct: 391 DEQRPHKATTCTEGKSLVPLMERNSTADGENDGDEWI 427


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 276 FILFDTGDLVGFKTQPERNNYRDPLNKF 359
           F+L   G+ V  K  PE+ NY + ++KF
Sbjct: 863 FLLQQNGEWVTVKAAPEKVNYFNEIDKF 890


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/52 (21%), Positives = 25/52 (48%)
 Frame = +3

Query: 363 VRDCQIMAVDKPRPYTFTIRGLQWTTVIERNFSVDNEKEREEWVKAIREVAS 518
           V    ++ +++ R YTF   G+   ++++  F+  +    + WV +    AS
Sbjct: 158 VEQLGLIVINQGREYTFVGNGVALPSIVDVAFASPSIARPDTWVVSTSYTAS 209


>AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR9 protein.
          Length = 184

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +2

Query: 290 HGGPGGLQDP-AGAEQLQGPSQQVHRTRLPDHGCGQTSPL 406
           HGGPGG + P  G    QG    V  T+    G G  +PL
Sbjct: 4   HGGPGGAKHPGTGGGYNQGGG--VKGTQPDKVGTGTQNPL 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,027
Number of Sequences: 2352
Number of extensions: 13129
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)