Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0794
(650 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g29700.1 68415.m03610 pleckstrin homology (PH) domain-contain... 57 9e-09
At5g05710.1 68418.m00628 pleckstrin homology (PH) domain-contain... 45 4e-05
At1g59610.1 68414.m06704 dynamin-like protein, putative (ADL3) s... 32 0.29
At1g10290.1 68414.m01159 dynamin-like protein 6 (ADL6) identical... 32 0.29
At1g72760.1 68414.m08413 protein kinase family protein contains ... 31 0.66
At5g65310.1 68418.m08216 homeobox-leucine zipper protein 5 (HB-5... 29 2.0
At5g57610.1 68418.m07197 protein kinase family protein similar t... 29 3.5
At2g30880.2 68415.m03764 pleckstrin homology (PH) domain-contain... 29 3.5
At2g30880.1 68415.m03763 pleckstrin homology (PH) domain-contain... 29 3.5
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 28 4.7
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 28 4.7
At5g64960.1 68418.m08171 cyclin-dependent kinase, putative / CDK... 27 8.2
At4g16990.3 68417.m02563 disease resistance protein (TIR-NBS cla... 27 8.2
At4g16990.2 68417.m02562 disease resistance protein (TIR-NBS cla... 27 8.2
At4g16990.1 68417.m02561 disease resistance protein (TIR-NBS cla... 27 8.2
>At2g29700.1 68415.m03610 pleckstrin homology (PH) domain-containing
protein (PH1) identical to AtPH1 [Arabidopsis thaliana]
GI:5926716; contains Pfam profile PF00169: PH domain
Length = 145
Score = 57.2 bits (132), Expect = 9e-09
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Frame = +3
Query: 219 KEGWLQKRGEHIRNWRDRYFILFDTGDLVGFKTQPERN-NYRDPLNKFTVRDCQIM--AV 389
+ GWL K+G++I+ WR R+F+L G L+ FK Q P +V DC + A
Sbjct: 29 RSGWLTKQGDYIKTWRRRWFVL-KRGKLLWFKDQAAAGIRGSTPRGVISVGDCLTVKGAE 87
Query: 390 D-KPRPYTFTIRGLQWTTVIERNFSVDNEKEREEWVKAI 503
D +P+ F + +T F DNEKE+EEW+ +I
Sbjct: 88 DVVNKPFAFELSSGSYTMF----FIADNEKEKEEWINSI 122
>At5g05710.1 68418.m00628 pleckstrin homology (PH) domain-containing
protein similar to AtPH1 [Arabidopsis thaliana]
GI:5926716; contains Pfam profile PF00169: PH domain
Length = 144
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +3
Query: 219 KEGWLQKRGEHIRNWRDRYFILFDTGDLVGFKTQPERNNYRDPLNKFTVRDCQIMAVDKP 398
+ GWL K+GE+I+ WR R+F+L G L FK R P V C +
Sbjct: 30 RTGWLTKQGEYIKTWRRRWFVL-KQGKLFWFKDSDVTRVSR-PRGVVPVESC--LTAKGA 85
Query: 399 RPYTFTIRGLQWTTVIE-RNFSVDNEKEREEWVKAI 503
+ +T E F D+EKE+E+W+ +I
Sbjct: 86 EDVLNKQNAFELSTRNETMYFIADSEKEKEDWINSI 121
>At1g59610.1 68414.m06704 dynamin-like protein, putative (ADL3)
strong similarity to dynamin-like protein 6 (ADL6)
[Arabidopsis thaliana] GI:6651399; contains Pfam
profiles PF01031: Dynamin central region, PF00350:
Dynamin family, PF02212: Dynamin GTPase effector domain,
PF00169: PH domain; identical to cDNA dynamin-like
protein ADL3, GI:4803835
Length = 920
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 216 VKEGWLQKRGEHIRNWRDRYFILFDTGDLVGFKTQPERNNYRDPLNKFTVRDCQI 380
+ G+L K+ W R+F+L + +G+ + E N+R + T+ +C I
Sbjct: 581 ITAGYLMKKSAKTNGWSRRWFVLNEKTGKLGYTKKQEERNFRGTV---TLEECSI 632
>At1g10290.1 68414.m01159 dynamin-like protein 6 (ADL6) identical to
dynamin-like protein 6 (ADL6) [Arabidopsis thaliana]
GI:6651399; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain, PF00169: PH domain
Length = 914
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 216 VKEGWLQKRGEHIRNWRDRYFILFDTGDLVGFKTQPERNNYRDPLNKFTVRDCQI 380
+ G+L K+ W R+F+L + +G+ + E N+R + T+ +C I
Sbjct: 574 ITAGYLMKKSAKTNGWSRRWFVLNEKTGKLGYTKKQEERNFRGTI---TLEECTI 625
>At1g72760.1 68414.m08413 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 697
Score = 31.1 bits (67), Expect = 0.66
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 287 EQYEVPISPIPDVFTTFLQPSFLHD 213
E VP+SPIP +FL+P FL D
Sbjct: 669 EHNSVPLSPIPSSQVSFLEPFFLRD 693
>At5g65310.1 68418.m08216 homeobox-leucine zipper protein 5 (HB-5) /
HD-ZIP transcription factor 5 identical to
homeobox-leucine zipper protein ATHB-5 (HD-ZIP protein
ATHB-5) (SP:P46667) [Arabidopsis thaliana]
Length = 312
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 423 GLQWTTVIERNFSVDNEKEREEWVKAIREVASQ 521
G++ +E+NF +DN+ E E VK +E+ Q
Sbjct: 77 GVEQVKALEKNFEIDNKLEPERKVKLAQELGLQ 109
>At5g57610.1 68418.m07197 protein kinase family protein similar to
protein kinase [Glycine max] GI:170047, MAP3K delta-1
protein kinase [Arabidopsis thaliana] GI:2253010;
contains Pfam profile: PF00069 Eukaryotic protein kinase
domain
Length = 1054
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +2
Query: 284 VRHGGPGGLQDPAGAEQLQGPSQQVHRTRLPDHGCGQTS--PLHFYHTWP 427
V HGGPGG + G E + P + H+ L G P+H H P
Sbjct: 324 VLHGGPGGYEGGNGCENCRVPYHRNHQL-LEQSNIGNNGFPPVHCAHCPP 372
>At2g30880.2 68415.m03764 pleckstrin homology (PH) domain-containing
protein contains Pfam profile PF00169: PH domain
Length = 381
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 222 EGWLQKRGEHIRNWRDRYFILFDTGDLVGFKTQ 320
+G L KR E +R W +R+ IL T + +KT+
Sbjct: 35 QGPLFKRSETLRKWNERWVILDPTTGKMEYKTR 67
>At2g30880.1 68415.m03763 pleckstrin homology (PH) domain-containing
protein contains Pfam profile PF00169: PH domain
Length = 504
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 222 EGWLQKRGEHIRNWRDRYFILFDTGDLVGFKTQ 320
+G L KR E +R W +R+ IL T + +KT+
Sbjct: 35 QGPLFKRSETLRKWNERWVILDPTTGKMEYKTR 67
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 420 RGLQWTTVIERNFSVDNEKEREEWVKAIREVASQLS 527
R W +IE DNE+E E+ VK +++V QLS
Sbjct: 116 RLFDWENIIED----DNEEESEKVVKELKDVGQQLS 147
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 420 RGLQWTTVIERNFSVDNEKEREEWVKAIREVASQLS 527
R W +IE DNE+E E+ VK +++V QLS
Sbjct: 116 RLFDWENIIED----DNEEESEKVVKELKDVGQQLS 147
>At5g64960.1 68418.m08171 cyclin-dependent kinase, putative / CDK,
putative similar to cyclin dependent kinase C
[Lycopersicon esculentum] gi|15215944|emb|CAC51391
Length = 513
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 311 QDPAGAEQLQGPSQQVHRTRLPDHGCGQTSPLHFYHTWPA 430
++ A ++LQ P QQ R HG GQ+ H WPA
Sbjct: 359 EEAAKKQKLQHPQQQHSRLPPQQHGVGQS---HAAPLWPA 395
>At4g16990.3 68417.m02563 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 801
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 243 GEHIRNWRDRYFILFDTGDLVGFKTQPERNNYRD 344
GE +RNWR +L + V K P NN+ D
Sbjct: 147 GEDLRNWRSEAEMLENIAKDVSNKLFPPSNNFSD 180
>At4g16990.2 68417.m02562 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 243 GEHIRNWRDRYFILFDTGDLVGFKTQPERNNYRD 344
GE +RNWR +L + V K P NN+ D
Sbjct: 147 GEDLRNWRSEAEMLENIAKDVSNKLFPPSNNFSD 180
>At4g16990.1 68417.m02561 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 520
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 243 GEHIRNWRDRYFILFDTGDLVGFKTQPERNNYRD 344
GE +RNWR +L + V K P NN+ D
Sbjct: 147 GEDLRNWRSEAEMLENIAKDVSNKLFPPSNNFSD 180
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,070,708
Number of Sequences: 28952
Number of extensions: 261789
Number of successful extensions: 743
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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