Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0792
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 347 7e-96
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 341 3e-94
SB_56| Best HMM Match : Actin (HMM E-Value=0) 341 5e-94
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 339 1e-93
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 335 2e-92
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 2e-41
SB_54| Best HMM Match : Actin (HMM E-Value=0) 119 3e-27
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 106 2e-23
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 84 1e-16
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 78 8e-15
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 2e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 49 4e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.001
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.68
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.68
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.68
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.90
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.90
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.2
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.2
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.6
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.6
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.6
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.6
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.6
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 3.6
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 3.6
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 4.8
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 28 8.4
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 347 bits (852), Expect = 7e-96
Identities = 165/182 (90%), Positives = 170/182 (93%)
Frame = +3
Query: 84 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 264 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 443
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 444 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRX 623
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV T P + LP AILR
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHAILRL 179
Query: 624 GL 629
L
Sbjct: 180 DL 181
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 341 bits (839), Expect = 3e-94
Identities = 163/182 (89%), Positives = 169/182 (92%)
Frame = +3
Query: 84 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 264 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 443
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 444 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRX 623
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV T P + LP AI+R
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHAIIRL 179
Query: 624 GL 629
L
Sbjct: 180 DL 181
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 341 bits (837), Expect = 5e-94
Identities = 163/180 (90%), Positives = 168/180 (93%)
Frame = +3
Query: 90 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 270 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 449
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 450 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRXGL 629
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV T P + LP AILR L
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHAILRLDL 180
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 339 bits (834), Expect = 1e-93
Identities = 162/180 (90%), Positives = 168/180 (93%)
Frame = +3
Query: 90 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 270 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 449
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 450 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRXGL 629
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV T P + LP AILR L
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPHAILRLDL 180
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 335 bits (823), Expect = 2e-92
Identities = 154/163 (94%), Positives = 160/163 (98%)
Frame = +3
Query: 84 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 264 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 443
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 444 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPT 572
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV T
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHT 163
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 183 bits (445), Expect = 1e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +3
Query: 90 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 270 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 356
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 87.8 bits (208), Expect = 7e-18
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = +3
Query: 429 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPX 608
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV T P + LP
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT-VPIYEGYALPH 136
Query: 609 AILRXGL 629
AI+R L
Sbjct: 137 AIIRLDL 143
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 165 bits (402), Expect = 2e-41
Identities = 78/157 (49%), Positives = 107/157 (68%), Gaps = 3/157 (1%)
Frame = +3
Query: 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 275
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 276 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 452
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 453 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 563
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGV 163
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 119 bits (286), Expect = 3e-27
Identities = 60/98 (61%), Positives = 70/98 (71%)
Frame = +3
Query: 336 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 515
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 516 ASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRXGL 629
ASGRTTG V D GDGV T P LP A R L
Sbjct: 2189 ASGRTTGTVFDCGDGVSHT-VPVYDGYWLPHATQRIDL 2225
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 108 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 209
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 106 bits (254), Expect = 2e-23
Identities = 53/100 (53%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
Frame = +3
Query: 384 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 563
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 564 LPTPXPSTKDTXLPXAILRXGL*PR--SRPXRTTLMEXPH 677
+ P + +P +I+R + R SR R L + H
Sbjct: 186 SHS-VPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGH 224
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 83.8 bits (198), Expect = 1e-16
Identities = 34/87 (39%), Positives = 59/87 (67%)
Frame = +3
Query: 294 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 473
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 474 PAMYVAIQAVLSLYASGRTTGIVLDSG 554
PA ++ +VL+ +A+GR+ G+V+DSG
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSG 89
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 77.8 bits (183), Expect = 8e-15
Identities = 41/60 (68%), Positives = 45/60 (75%)
Frame = +3
Query: 450 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRXGL 629
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGV P + LP AILR L
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHN-VPIYEGYALPHAILRLDL 59
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 209
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 78 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 248
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 249 GDEAQSKRGILTL 287
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 495 QAVLSLYASGRTTGIVLDSG 554
Q LSLYASG T G+ L SG
Sbjct: 767 QLSLSLYASGMTLGVCLSSG 786
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +3
Query: 222 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 401
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +3
Query: 96 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 275
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 276 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 365
L Y P + G + NWD ++IW +TF E
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 206 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 90
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 339 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 518
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 519 SGRTTGIV 542
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 285 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 437
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 181 GNTARGASSPAKPALHIPEPLSTT 110
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 426 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 542
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.68
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 152 CETGLAHT 129
CET L T
Sbjct: 252 CETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 181 GNTARGASSPAKPALHIPEPLSTT 110
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 0.90
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 152 CETGLAHT 129
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 0.90
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 152 CETGLAHT 129
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 0.90
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 152 CETGLAHT 129
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 152 CETGLAHT 129
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 152 CETGLAHT 129
CET L T
Sbjct: 288 CETQLVLT 295
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 152 CETGLAHT 129
CET L T
Sbjct: 212 CETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268
Query: 188 DRGEHGARSIISCETGLAHT 129
+HG R +SCET L T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 181 GNTARGASSPAKPALHIPEPLSTT 110
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 188 DRGEHGARSIISCETGLAHT 129
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667
Query: 188 DRGEHGARSIISCETGLAHT 129
+HG R +SCET L T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695
Query: 188 DRGEHGARSIISCETGLAHT 129
+HG R +SCET L T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 490 PSKPCSRCTRPGVPP 534
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105
Query: 188 DRGEHGARSIISCETGLAHT 129
+HG R +SCET L T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 356 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 189
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 188 DRGEHGARSIISCETGLAHT 129
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 263 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 129
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 152 CETGLAHT 129
CET L T
Sbjct: 263 CETQLVLT 270
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 329 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 153
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 152 CETGLAHT 129
CET L T
Sbjct: 61 CETQLVLT 68
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = -3
Query: 269 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 105
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 104 GNFFVAHLE 78
G V L+
Sbjct: 521 GQVDVLLLD 529
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 414 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 542
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 181 GNTARGASSPAKPALHIPEPLSTT 110
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 181 GNTARGASSPAKPALHIPEPLSTT 110
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 410 SPQPQGQQREDDPDHVRNIQHARHVRXHPS 499
SP P+ R D+P V A HV HPS
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPS 294
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 27.9 bits (59), Expect = 8.4
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Frame = -1
Query: 562 TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALGLRGAS 404
T P + T+P + D Y S +W+ VL N ++++F +LGL A
Sbjct: 8 TTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLGLAHAK 66
Query: 403 VSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 254
+ T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 67 LVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,811,254
Number of Sequences: 59808
Number of extensions: 544373
Number of successful extensions: 1750
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1734
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -