Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0792
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 325 2e-89
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 324 3e-89
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 324 3e-89
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 323 8e-89
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 322 1e-88
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 322 1e-88
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 318 2e-87
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 318 2e-87
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 318 2e-87
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 297 3e-81
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 236 9e-63
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 211 4e-55
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 174 4e-44
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 134 4e-32
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 124 4e-29
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 104 7e-23
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 91 6e-19
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 79 2e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 77 1e-14
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 41 7e-04
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 41 7e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.10
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 31 0.56
At1g10620.1 68414.m01204 protein kinase family protein contains ... 31 0.56
At1g32190.1 68414.m03959 expressed protein 30 1.7
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.0
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.0
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 6.8
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 6.8
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 9.0
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 27 9.0
At3g05750.1 68416.m00646 expressed protein 27 9.0
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 27 9.0
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 325 bits (798), Expect = 2e-89
Identities = 156/179 (87%), Positives = 162/179 (90%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 452
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRXGL 629
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV T P + LP AILR L
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLDL 182
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 324 bits (797), Expect = 3e-89
Identities = 156/179 (87%), Positives = 161/179 (89%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 452
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRXGL 629
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV T P + LP AILR L
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLDL 182
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 324 bits (797), Expect = 3e-89
Identities = 156/179 (87%), Positives = 161/179 (89%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 452
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRXGL 629
MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV T P + LP AILR L
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLDL 182
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 323 bits (793), Expect = 8e-89
Identities = 155/179 (86%), Positives = 161/179 (89%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 452
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRXGL 629
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV T P + LP AILR L
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLDL 182
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 322 bits (791), Expect = 1e-88
Identities = 154/179 (86%), Positives = 160/179 (89%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 452
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRXGL 629
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV T P + LP AILR L
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLDL 182
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 322 bits (791), Expect = 1e-88
Identities = 154/179 (86%), Positives = 160/179 (89%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 452
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRXGL 629
MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV T P + LP AILR L
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLDL 182
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 318 bits (781), Expect = 2e-87
Identities = 149/179 (83%), Positives = 161/179 (89%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 452
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRXGL 629
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV T P + LP AILR L
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAILRLDL 182
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 318 bits (781), Expect = 2e-87
Identities = 149/179 (83%), Positives = 161/179 (89%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 452
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRXGL 629
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV T P + LP AILR L
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAILRLDL 182
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 318 bits (781), Expect = 2e-87
Identities = 149/179 (83%), Positives = 161/179 (89%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 452
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRXGL 629
MFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV T P + LP AILR L
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAILRLDL 182
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 297 bits (730), Expect = 3e-81
Identities = 137/179 (76%), Positives = 157/179 (87%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 273 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 452
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 453 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRXGL 629
MFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGV T P + LP AILR L
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLDL 183
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 236 bits (578), Expect = 9e-63
Identities = 114/174 (65%), Positives = 134/174 (77%)
Frame = +3
Query: 108 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 287
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 288 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 467
K P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 468 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPSTKDTXLPXAILRXGL 629
+ PAMYV++Q+VL LY+SGRTTG+VLD G+ V T P + LP ILR L
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT-VPVYEGYALPHGILRLDL 171
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 211 bits (515), Expect = 4e-55
Identities = 98/138 (71%), Positives = 116/138 (84%)
Frame = +3
Query: 216 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 395
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 396 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTP 575
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGV
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGV-SYI 119
Query: 576 XPSTKDTXLPXAILRXGL 629
P + + LP AILR L
Sbjct: 120 VPIYEGSALPHAILRLDL 137
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 174 bits (424), Expect = 4e-44
Identities = 78/154 (50%), Positives = 106/154 (68%), Gaps = 2/154 (1%)
Frame = +3
Query: 108 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 281
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 282 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 461
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 462 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 563
+N +++ IQAVL+LYA G TG+V+DSGDGV
Sbjct: 127 KYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGV 160
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 134 bits (325), Expect = 4e-32
Identities = 73/178 (41%), Positives = 106/178 (59%), Gaps = 22/178 (12%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 242
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 243 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 386
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 387 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 560
HP+LL E PLN + REK ++MFE + PA+++A VL+ +A+GR T +V+D G G
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGG 182
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 124 bits (300), Expect = 4e-29
Identities = 75/178 (42%), Positives = 102/178 (57%), Gaps = 26/178 (14%)
Frame = +3
Query: 105 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 230
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 231 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 401
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 402 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLDSGDG 560
TE+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDG 182
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 104 bits (249), Expect = 7e-23
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 227
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 228 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 404
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 405 EAPLNPKANREK 440
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 91.1 bits (216), Expect = 6e-19
Identities = 62/154 (40%), Positives = 81/154 (52%), Gaps = 2/154 (1%)
Frame = +3
Query: 105 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 281
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 282 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 458
TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 459 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 560
ETFN Y + QAVLSLYA GR +G +D G G
Sbjct: 113 ETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHG 146
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 79.4 bits (187), Expect = 2e-15
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Frame = +3
Query: 108 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 287
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 288 -----KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 449
+ P + +V ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 450 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVLPTPXPST 587
++FET+ PA+ + A S Y + GI DG++ P +T
Sbjct: 138 LLFETYGVPAVAFGVDAAFS-YKYNQLHGIC--KKDGIVLCPGFTT 180
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 76.6 bits (180), Expect = 1e-14
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Frame = +3
Query: 108 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 287
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 288 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 467
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 468 NTPAMYVA-IQAVLSLYASGRTTGIVL 545
++Y+A Q+++ LY + R +L
Sbjct: 122 GFSSLYIAHPQSLVHLYEASRQPDSIL 148
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Frame = +3
Query: 351 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 500
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 501 VLSLYASGRTTGIVLDSGDGVL 566
VL+LYA+ RT+GIV++ G V+
Sbjct: 241 VLALYAARRTSGIVVNIGFQVI 262
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Frame = +3
Query: 351 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 500
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 501 VLSLYASGRTTGIVLDSGDGVL 566
VL+LYA+ RT+GIV++ G V+
Sbjct: 241 VLALYAARRTSGIVVNIGFQVI 262
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 229 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 92
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +1
Query: 478 PCTXPSKPCSRCTRPGVPPVSCWTPATVXSPHRAHLXRIPHXP 606
P PS P T P PP S TP T+ PH L ++ H P
Sbjct: 600 PPVIPSPPIVGPT-PSSPPPSTPTPGTLLHPHHLLLPQLSHLP 641
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +1
Query: 454 CSKHSTRPPCTXPSKPCSRCTRPG-VPPVSCWTPATVXSPHRAHLXRIPHXPXPSCVXDF 630
C+ S+ PP S C R TRP V P TP+ SP + P PS
Sbjct: 384 CAAFSSLPPVDCGSFGCGRSTRPPVVVPSPPTTPSPGGSPPSPSISPSPPITVPSPPTTP 443
Query: 631 NPG 639
+PG
Sbjct: 444 SPG 446
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +1
Query: 478 PCTXPSKPCSRCTRPGVPPVSCWTPATVXSPHRAHLXRIPHXPXPSCVXDFNPG 639
P PS P S PG PP S TP SP + P PS PG
Sbjct: 452 PSIVPSPP-STTPSPGSPPTSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPTPG 504
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +1
Query: 466 STRPPCTXPSKPCSRCTRPGVPPVSCWTPATVXSPHRAHLXRIPHXPXPSCVXDFNP 636
+T+PP T P P S T+ PP + P P+ P P PS +P
Sbjct: 40 TTQPPATSPPSPPSPDTQTSPPPATAAQPPPNQPPNTTPPPTPPSSPPPSITPPPSP 96
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 454 CSKHSTRPPCTXPSKPCSRC-TRPGVPPVSCW 546
C K S C P+ CS C +P P SCW
Sbjct: 343 CKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCW 374
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 252 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 431
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 432 REK 440
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 252 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 431
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 432 REK 440
REK
Sbjct: 225 REK 227
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 340 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 251
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 332 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 225
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 205 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 83
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 454 CSKHSTRPPCTXPSKPCSRCTRPGVPPVSCWTPATVXSP 570
C +RPP S C R P P V+ P ++ SP
Sbjct: 372 CKAFLSRPPVNCGSFSCGRSVSPRPPVVTPLPPPSLPSP 410
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 269
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 270 RG--ILTLKYPIEHGIVTNWDDMEK 338
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/76 (22%), Positives = 33/76 (43%)
Frame = +3
Query: 318 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 497
+W +E + + + + P LL EA + PK+ E +++TF T ++ +
Sbjct: 488 DWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPK 547
Query: 498 AVLSLYASGRTTGIVL 545
+ +A G VL
Sbjct: 548 LSRTDFAVAHYAGEVL 563
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,407,725
Number of Sequences: 28952
Number of extensions: 352854
Number of successful extensions: 1072
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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