Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0790
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   6.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   6.0  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.0  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 215 YLQVYLHSFYKQRTWPEVYRKI 150
           Y  + + +FYK+RTW  + + +
Sbjct: 80  YYVIVVTTFYKRRTWTRLLKNL 101


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 228 NFRNISSSVSPLFLQATDM 172
           NF   SSSV P +++ T M
Sbjct: 54  NFNESSSSVFPNYIRTTSM 72


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 228 NFRNISSSVSPLFLQATDM 172
           NF   SSSV P +++ T M
Sbjct: 54  NFNESSSSVFPNYIRTTSM 72


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/26 (30%), Positives = 10/26 (38%)
 Frame = -1

Query: 360 FSEWVLFINSHHLQNPFQYNLNFCEH 283
           F+ W  + N      P   N N C H
Sbjct: 30  FASWAGYRNGEGSFKPQNINANLCTH 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,349
Number of Sequences: 336
Number of extensions: 3819
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)