Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0790
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   1.9  
AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha su...    24   5.8  
AY724806-1|AAW50315.1|  163|Anopheles gambiae G protein alpha su...    24   5.8  
AY724803-1|AAW50312.1|  162|Anopheles gambiae G protein alpha su...    24   5.8  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -2

Query: 254 INIFFNITR-IFGIYLQVYLHSFYKQR 177
           ++I F +   IFG+ + V  H+F+K+R
Sbjct: 536 LSIIFGVVHMIFGVCMSVVNHNFFKKR 562


>AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha
           subunit AgGq6 protein.
          Length = 206

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 150 YFPVYLWPCPLLVKRVEIHLKIYSENSGNIEKNIYSKCTLSS 275
           YFP Y  P    VK  E  LK+Y   + + ++  YS  T ++
Sbjct: 142 YFPEYDGPKHDDVKAREFILKVYLRENPDPDRMCYSHFTCAT 183


>AY724806-1|AAW50315.1|  163|Anopheles gambiae G protein alpha
           subunit AgGq4 protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 150 YFPVYLWPCPLLVKRVEIHLKIYSENSGNIEKNIYSKCTLSS 275
           YFP Y  P    VK  E  LK+Y   + + ++  YS  T ++
Sbjct: 99  YFPEYDGPKHDDVKAREFILKVYLRENPDPDRMCYSHFTCAT 140


>AY724803-1|AAW50312.1|  162|Anopheles gambiae G protein alpha
           subunit AgGq1 protein.
          Length = 162

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 150 YFPVYLWPCPLLVKRVEIHLKIYSENSGNIEKNIYSKCTLSS 275
           YFP Y  P    VK  E  LK+Y   + + ++  YS  T ++
Sbjct: 98  YFPEYDGPKHDDVKAREFILKVYLRENPDPDRMCYSHFTCAT 139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,483
Number of Sequences: 2352
Number of extensions: 13964
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)