Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0787
         (750 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YIZ4 Cluster: Putative uncharacterized protein; n=1; ...    36   0.81 
UniRef50_Q8EAL7 Cluster: ATPase, AAA family; n=4; Shewanella|Rep...    34   4.3  
UniRef50_Q836N3 Cluster: Streptomycin 3''-adenylyltransferase, p...    34   4.3  
UniRef50_A2EWT5 Cluster: CDP-alcohol phosphatidyltransferase fam...    34   4.3  
UniRef50_Q6AI67 Cluster: Putative uncharacterized protein; n=1; ...    33   9.9  

>UniRef50_Q4YIZ4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 49

 Score = 36.3 bits (80), Expect = 0.81
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 559 IFVFLFHITFCFRLIIIYKPYQQNNN-HECYIYYY 660
           I +F   + F FR  IIY  Y  NNN H+ Y+ YY
Sbjct: 8   ILIFFIILIFIFRFFIIYFNYDSNNNYHKVYLSYY 42


>UniRef50_Q8EAL7 Cluster: ATPase, AAA family; n=4; Shewanella|Rep:
           ATPase, AAA family - Shewanella oneidensis
          Length = 680

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = -3

Query: 235 WCHK*AE*RSSQPLHIKKSCSMYNVIGKSMKNILDVFSPLKMSSKLFIVSHIKNALGAR- 59
           W H  AE    + +HIK S  +   +G S +NI  +F       KL ++  + + L  R 
Sbjct: 492 WVHHLAETHGFELMHIKCSDVLSKYVGDSEQNIARLFRDAHRQQKLMLIDEVDSLLSKRD 551

Query: 58  TLRRLH 41
           + + LH
Sbjct: 552 SAQALH 557


>UniRef50_Q836N3 Cluster: Streptomycin 3''-adenylyltransferase,
           putative; n=1; Enterococcus faecalis|Rep: Streptomycin
           3''-adenylyltransferase, putative - Enterococcus
           faecalis (Streptococcus faecalis)
          Length = 261

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
 Frame = +1

Query: 37  IDVNDGAFSLLVHFLCARQ*KVWSSFLEARIHRVYFSYFYRLHYTCYTIF*CEVAVKIFI 216
           + +N+G   ++VH L A+    +   ++  +  +Y    Y     C+++   +V + ++ 
Sbjct: 1   MSINNGGI-IVVHQLLAQMENGYMKIIKENLVGIYLHGSYAFGTYCHSVSDLDVLIVVYE 59

Query: 217 LLTCDTKKWFLWRSIYKLD----NKSMKVHFVYLNET 315
            LT D KK  L  +I  LD     K ++ H + L +T
Sbjct: 60  KLTIDEKKQLLDYTINILDKWAPKKGIEFHVLQLKDT 96


>UniRef50_A2EWT5 Cluster: CDP-alcohol phosphatidyltransferase family
           protein; n=1; Trichomonas vaginalis G3|Rep: CDP-alcohol
           phosphatidyltransferase family protein - Trichomonas
           vaginalis G3
          Length = 388

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 42  CKRRSVLAPSAFFMCETIKSLELIFRGENTSSIFFIL 152
           C++R+ LAP   F+  TI  L     G  T+S+FFI+
Sbjct: 232 CRKRAFLAPIPMFISATIICLMKFLFGSTTNSVFFIM 268


>UniRef50_Q6AI67 Cluster: Putative uncharacterized protein; n=1;
           Desulfotalea psychrophila|Rep: Putative uncharacterized
           protein - Desulfotalea psychrophila
          Length = 213

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = -3

Query: 277 YYLTYKYFSTKTIFWCHK*AE*RSSQPLHIKKSCSMYNVIGKSMKNILDVFSPLKMSSKL 98
           Y LTYK F  +T+FW  K  + +++  +        Y +   +    LD++  L  S K+
Sbjct: 7   YNLTYKRFIMRTLFWTFKGGQGKTTLAVSYALYSDSYFITNDTESGTLDIYGGLFSSDKM 66


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,968,771
Number of Sequences: 1657284
Number of extensions: 13056881
Number of successful extensions: 29332
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29309
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)