Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0786
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane trans... 59 1e-08
U46751-1|AAC52070.1| 440|Homo sapiens phosphotyrosine independe... 33 0.83
U41806-1|AAA93299.1| 440|Homo sapiens p60 protein. 33 0.83
BC019111-1|AAH19111.1| 440|Homo sapiens sequestosome 1 protein. 33 0.83
BC017222-1|AAH17222.1| 440|Homo sapiens sequestosome 1 protein. 33 0.83
BC003139-1|AAH03139.1| 440|Homo sapiens sequestosome 1 protein. 33 0.83
BC001874-1|AAH01874.1| 356|Homo sapiens SQSTM1 protein protein. 33 0.83
BC000951-1|AAH00951.1| 368|Homo sapiens Similar to sequestosome... 33 0.83
DQ427109-1|ABD72605.1| 1048|Homo sapiens OTUD4: OTU domain conta... 30 7.7
BC118653-1|AAI18654.1| 1049|Homo sapiens OTU domain containing 4... 30 7.7
BC118572-1|AAI18573.1| 1049|Homo sapiens OTU domain containing 4... 30 7.7
>AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane
transporter protein protein.
Length = 283
Score = 59.3 bits (137), Expect = 1e-08
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +2
Query: 209 MVNYAWSGRSQGKP*WRTVAILTCKSIVGTGYRG 310
MVNYAW+GRSQ K WR+VA+LTCKS+V GYRG
Sbjct: 1 MVNYAWAGRSQRKLWWRSVAVLTCKSVVRPGYRG 34
>U46751-1|AAC52070.1| 440|Homo sapiens phosphotyrosine independent
ligand for the Lck SH2 domain p62 protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.83
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 646 PREPRTVLARPRPVPESTTSRPHEPTIGFRKNL 744
PR PR ARP P ES + +P++ F KN+
Sbjct: 208 PRPPRAGEARPGPTAESASGPSEDPSVNFLKNV 240
>U41806-1|AAA93299.1| 440|Homo sapiens p60 protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.83
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 646 PREPRTVLARPRPVPESTTSRPHEPTIGFRKNL 744
PR PR ARP P ES + +P++ F KN+
Sbjct: 208 PRPPRAGEARPGPTAESASGPSEDPSVNFLKNV 240
>BC019111-1|AAH19111.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.83
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 646 PREPRTVLARPRPVPESTTSRPHEPTIGFRKNL 744
PR PR ARP P ES + +P++ F KN+
Sbjct: 208 PRPPRAGEARPGPTAESASGPSEDPSVNFLKNV 240
>BC017222-1|AAH17222.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.83
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 646 PREPRTVLARPRPVPESTTSRPHEPTIGFRKNL 744
PR PR ARP P ES + +P++ F KN+
Sbjct: 208 PRPPRAGEARPGPTAESASGPSEDPSVNFLKNV 240
>BC003139-1|AAH03139.1| 440|Homo sapiens sequestosome 1 protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.83
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 646 PREPRTVLARPRPVPESTTSRPHEPTIGFRKNL 744
PR PR ARP P ES + +P++ F KN+
Sbjct: 208 PRPPRAGEARPGPTAESASGPSEDPSVNFLKNV 240
>BC001874-1|AAH01874.1| 356|Homo sapiens SQSTM1 protein protein.
Length = 356
Score = 33.5 bits (73), Expect = 0.83
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 646 PREPRTVLARPRPVPESTTSRPHEPTIGFRKNL 744
PR PR ARP P ES + +P++ F KN+
Sbjct: 124 PRPPRAGEARPGPTAESASGPSEDPSVNFLKNV 156
>BC000951-1|AAH00951.1| 368|Homo sapiens Similar to sequestosome 1
protein.
Length = 368
Score = 33.5 bits (73), Expect = 0.83
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 646 PREPRTVLARPRPVPESTTSRPHEPTIGFRKNL 744
PR PR ARP P ES + +P++ F KN+
Sbjct: 136 PRPPRAGEARPGPTAESASGPSEDPSVNFLKNV 168
>DQ427109-1|ABD72605.1| 1048|Homo sapiens OTUD4: OTU domain
containing 4 protein.
Length = 1048
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 524 SGPILVSRTGAVG*TKRSVKAPKKRSWDTMKG 619
+GP+LV G T +++KAP SW+T+ G
Sbjct: 246 NGPVLVEELGKKH-TSKNLKAPPPESWNTVSG 276
>BC118653-1|AAI18654.1| 1049|Homo sapiens OTU domain containing 4
protein.
Length = 1049
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 524 SGPILVSRTGAVG*TKRSVKAPKKRSWDTMKG 619
+GP+LV G T +++KAP SW+T+ G
Sbjct: 247 NGPVLVEELGKKH-TSKNLKAPPPESWNTVSG 277
>BC118572-1|AAI18573.1| 1049|Homo sapiens OTU domain containing 4
protein.
Length = 1049
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 524 SGPILVSRTGAVG*TKRSVKAPKKRSWDTMKG 619
+GP+LV G T +++KAP SW+T+ G
Sbjct: 247 NGPVLVEELGKKH-TSKNLKAPPPESWNTVSG 277
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,261,579
Number of Sequences: 237096
Number of extensions: 2570047
Number of successful extensions: 9291
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9291
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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