Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0785
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic t...   275   4e-74
AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p pro...   273   1e-73
AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic i...   273   1e-73
AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB...   273   1e-73
AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA...   273   1e-73
M28863-1|AAA62770.1|  543|Drosophila melanogaster seven-up prote...    30   2.4  
AY129452-1|AAM76194.1|  543|Drosophila melanogaster RE08410p pro...    30   2.4  
AE014297-1474|AAN13541.1|  746|Drosophila melanogaster CG11502-P...    30   2.4  
AE014297-1473|AAF54773.1|  543|Drosophila melanogaster CG11502-P...    30   2.4  

>AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic
           translation initiationfactor 5a protein.
          Length = 159

 Score =  275 bits (674), Expect = 4e-74
 Identities = 124/147 (84%), Positives = 136/147 (92%)
 Frame = +2

Query: 89  SGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYED 268
           SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KKYED
Sbjct: 13  SGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYED 72

Query: 269 ICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSG 448
           ICPSTHNMDVP+VKRED QL  ISDD +LTLM D+GDLREDLK+P+G+LG QLR DFDSG
Sbjct: 73  ICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEGELGEQLRLDFDSG 132

Query: 449 KELLCTVLKSCGEECVIAVKANTALDK 529
           K+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 133 KDLLCTVLKACGEECVIAIKTNTALDK 159


>AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p
           protein.
          Length = 159

 Score =  273 bits (670), Expect = 1e-73
 Identities = 123/147 (83%), Positives = 136/147 (92%)
 Frame = +2

Query: 89  SGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYED 268
           SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KKYED
Sbjct: 13  SGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYED 72

Query: 269 ICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSG 448
           ICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSG
Sbjct: 73  ICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSG 132

Query: 449 KELLCTVLKSCGEECVIAVKANTALDK 529
           K+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 133 KDLLCTVLKACGEECVIAIKTNTALDK 159


>AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic
           initiation factor 5A protein.
          Length = 159

 Score =  273 bits (670), Expect = 1e-73
 Identities = 123/147 (83%), Positives = 136/147 (92%)
 Frame = +2

Query: 89  SGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYED 268
           SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KKYED
Sbjct: 13  SGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYED 72

Query: 269 ICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSG 448
           ICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSG
Sbjct: 73  ICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSG 132

Query: 449 KELLCTVLKSCGEECVIAVKANTALDK 529
           K+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 133 KDLLCTVLKACGEECVIAIKTNTALDK 159


>AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB,
           isoform B protein.
          Length = 159

 Score =  273 bits (670), Expect = 1e-73
 Identities = 123/147 (83%), Positives = 136/147 (92%)
 Frame = +2

Query: 89  SGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYED 268
           SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KKYED
Sbjct: 13  SGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYED 72

Query: 269 ICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSG 448
           ICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSG
Sbjct: 73  ICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSG 132

Query: 449 KELLCTVLKSCGEECVIAVKANTALDK 529
           K+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 133 KDLLCTVLKACGEECVIAIKTNTALDK 159


>AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA,
           isoform A protein.
          Length = 159

 Score =  273 bits (670), Expect = 1e-73
 Identities = 123/147 (83%), Positives = 136/147 (92%)
 Frame = +2

Query: 89  SGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYED 268
           SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KKYED
Sbjct: 13  SGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYED 72

Query: 269 ICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSG 448
           ICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR DFDSG
Sbjct: 73  ICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDFDSG 132

Query: 449 KELLCTVLKSCGEECVIAVKANTALDK 529
           K+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 133 KDLLCTVLKACGEECVIAIKTNTALDK 159


>M28863-1|AAA62770.1|  543|Drosophila melanogaster seven-up protein
           type 1 protein.
          Length = 543

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 189 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 302
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


>AY129452-1|AAM76194.1|  543|Drosophila melanogaster RE08410p
           protein.
          Length = 543

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 189 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 302
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


>AE014297-1474|AAN13541.1|  746|Drosophila melanogaster CG11502-PA,
           isoform A protein.
          Length = 746

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 189 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 302
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


>AE014297-1473|AAF54773.1|  543|Drosophila melanogaster CG11502-PB,
           isoform B protein.
          Length = 543

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 189 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 302
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,138,879
Number of Sequences: 53049
Number of extensions: 688705
Number of successful extensions: 1926
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1925
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)