Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0784
         (818 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55375-6|AAC69046.2|  431|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U40797-8|AAL08029.1|  332|Caenorhabditis elegans Serpentine rece...    29   3.0  
AC024770-9|AAF59487.2|  131|Caenorhabditis elegans Hypothetical ...    28   7.0  
Z68749-5|CAC35817.1|  712|Caenorhabditis elegans Hypothetical pr...    28   9.2  
Z68219-6|CAC35826.1|  712|Caenorhabditis elegans Hypothetical pr...    28   9.2  
AF051403-2|AAC28323.1|  712|Caenorhabditis elegans fibulin-1 iso...    28   9.2  
AF051402-1|AAC28322.1|  712|Caenorhabditis elegans fibulin-1 iso...    28   9.2  
AB212860-1|BAD98165.1|  712|Caenorhabditis elegans fibulin-1C pr...    28   9.2  

>U55375-6|AAC69046.2|  431|Caenorhabditis elegans Hypothetical
           protein K03E6.7 protein.
          Length = 431

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 156 NIEKRDVMESMKNAWNEVVKTLSDAGDAVVHVFKPTEKSV 275
           NI   D +  M  + +E++K +  A D V H+ KP  KSV
Sbjct: 387 NIGDDDTVSKMLMSHSELIKDIELATDRVGHILKPNIKSV 426


>U40797-8|AAL08029.1|  332|Caenorhabditis elegans Serpentine
           receptor, class u protein7 protein.
          Length = 332

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
 Frame = +3

Query: 570 FTEFTYV*YSRTFNGIHSFNLLTISLY*I*TC--INHTFXLVCSNSLN----LVNEHIFF 731
           F   TY+ +S TFN    +  L    Y I T   +N+T  +           +VN HIF 
Sbjct: 7   FGNQTYMDFSFTFNTFPVYFALLPLFYVIPTIYIVNYTIFVFMEQYTRKKTCVVNPHIFI 66

Query: 732 *IAQSHKINIYXF 770
            ++ +H +NI  F
Sbjct: 67  VVSSAHTVNILSF 79


>AC024770-9|AAF59487.2|  131|Caenorhabditis elegans Hypothetical
           protein Y39H10A.1 protein.
          Length = 131

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 162 EKRDVMESMKNAWNEVVKTLSDAGDAVVHVFKPTEKSVIDKMADS 296
           ++RD  E +KNA    + T+  AG+A V       K   D + D+
Sbjct: 67  KRRDASEDIKNAGRNAIGTVDSAGNAAVDKAGELVKGGTDHIKDA 111


>Z68749-5|CAC35817.1|  712|Caenorhabditis elegans Hypothetical
           protein F56H11.1a protein.
          Length = 712

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = -3

Query: 723 YVH-SLNSNYCYRQXKMCGL 667
           Y+H SLN N C RQ   CGL
Sbjct: 555 YIHDSLNKNRCNRQPSACGL 574


>Z68219-6|CAC35826.1|  712|Caenorhabditis elegans Hypothetical
           protein F56H11.1a protein.
          Length = 712

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = -3

Query: 723 YVH-SLNSNYCYRQXKMCGL 667
           Y+H SLN N C RQ   CGL
Sbjct: 555 YIHDSLNKNRCNRQPSACGL 574


>AF051403-2|AAC28323.1|  712|Caenorhabditis elegans fibulin-1
           isoform C precursor protein.
          Length = 712

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = -3

Query: 723 YVH-SLNSNYCYRQXKMCGL 667
           Y+H SLN N C RQ   CGL
Sbjct: 555 YIHDSLNKNRCNRQPSACGL 574


>AF051402-1|AAC28322.1|  712|Caenorhabditis elegans fibulin-1
           isoform C precursor protein.
          Length = 712

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = -3

Query: 723 YVH-SLNSNYCYRQXKMCGL 667
           Y+H SLN N C RQ   CGL
Sbjct: 555 YIHDSLNKNRCNRQPSACGL 574


>AB212860-1|BAD98165.1|  712|Caenorhabditis elegans fibulin-1C
           protein.
          Length = 712

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = -3

Query: 723 YVH-SLNSNYCYRQXKMCGL 667
           Y+H SLN N C RQ   CGL
Sbjct: 555 YIHDSLNKNRCNRQPSACGL 574


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,092,047
Number of Sequences: 27780
Number of extensions: 358982
Number of successful extensions: 798
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)