Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0783
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.        26   1.3  
AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.        26   1.3  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   2.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.2  

>AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 658 RNMFLWFFNRFPQYI 614
           RN+F+ FF  +PQY+
Sbjct: 50  RNIFVMFFEEYPQYL 64


>AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 658 RNMFLWFFNRFPQYI 614
           RN+F+ FF  +PQY+
Sbjct: 50  RNIFVMFFEEYPQYL 64


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +3

Query: 582 TRQHPPAHRQIMYWGKRLKNQRN 650
           TR H   HR I +W   L   RN
Sbjct: 333 TRLHQDPHRNIFWWSPLLARLRN 355


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 574 IYRRDNTHRRTV 609
           +Y+RDNTH R V
Sbjct: 262 LYQRDNTHYRAV 273


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 574 IYRRDNTHRRTV 609
           +Y+RDNTH R V
Sbjct: 262 LYQRDNTHYRAV 273


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,881
Number of Sequences: 2352
Number of extensions: 11960
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)