Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0780
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093746-1|AAH93746.2|  778|Homo sapiens PDZ domain containing R...    38   0.051
BC093744-1|AAH93744.1|  778|Homo sapiens PDZ domain containing R...    38   0.051
AK131554-1|BAD18688.1|  776|Homo sapiens protein ( Homo sapiens ...    38   0.051
BT007367-1|AAP36031.1|  868|Homo sapiens programmed cell death 6...    31   4.4  
BC068454-1|AAH68454.1|  873|Homo sapiens PDCD6IP protein protein.      31   4.4  
BC025688-1|AAH25688.1|  377|Homo sapiens mucin 7, secreted protein.    31   4.4  
BC020066-1|AAH20066.1|  868|Homo sapiens programmed cell death 6...    31   4.4  
AK002122-1|BAA92092.1|  617|Homo sapiens protein ( Homo sapiens ...    31   4.4  
AF349951-1|AAK20398.1|  868|Homo sapiens HP95 protein.                 31   4.4  
AF250394-1|AAQ14260.1|  868|Homo sapiens dopamine receptor inter...    31   4.4  
AF151793-1|AAF08220.1|  868|Homo sapiens ALG-2 interacting prote...    31   4.4  
AB037796-1|BAA92613.1|  546|Homo sapiens KIAA1375 protein protein.     31   4.4  

>BC093746-1|AAH93746.2|  778|Homo sapiens PDZ domain containing RING
           finger 4 protein.
          Length = 778

 Score = 37.5 bits (83), Expect = 0.051
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
 Frame = +3

Query: 171 LVRTFEPEPAYPVETS-KYVERSTQADPADKHLSP-KQLRPPSKLILS-SEYLCTSSKHL 341
           L RT    PAY + +  + +  STQ D   +H+    +LRPP+  +     +L + S H 
Sbjct: 53  LRRTPLSRPAYGMASEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSDSCHS 112

Query: 342 SSHLEHAFISDFDYNNSRPSDQE 410
              +EH F  D +Y +S P+D +
Sbjct: 113 LHPMEHEFYEDNEYISSLPADAD 135


>BC093744-1|AAH93744.1|  778|Homo sapiens PDZ domain containing RING
           finger 4 protein.
          Length = 778

 Score = 37.5 bits (83), Expect = 0.051
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
 Frame = +3

Query: 171 LVRTFEPEPAYPVETS-KYVERSTQADPADKHLSP-KQLRPPSKLILS-SEYLCTSSKHL 341
           L RT    PAY + +  + +  STQ D   +H+    +LRPP+  +     +L + S H 
Sbjct: 53  LRRTPLSRPAYGMASEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSDSCHS 112

Query: 342 SSHLEHAFISDFDYNNSRPSDQE 410
              +EH F  D +Y +S P+D +
Sbjct: 113 LHPMEHEFYEDNEYISSLPADAD 135


>AK131554-1|BAD18688.1|  776|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16796 fis, clone TBAES2008133, moderately
           similar to Mus musculus semaF cytoplasmic domain
           associated protein 3. ).
          Length = 776

 Score = 37.5 bits (83), Expect = 0.051
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
 Frame = +3

Query: 171 LVRTFEPEPAYPVETS-KYVERSTQADPADKHLSP-KQLRPPSKLILS-SEYLCTSSKHL 341
           L RT    PAY + +  + +  STQ D   +H+    +LRPP+  +     +L + S H 
Sbjct: 51  LRRTPLSRPAYGMASEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSDSCHS 110

Query: 342 SSHLEHAFISDFDYNNSRPSDQE 410
              +EH F  D +Y +S P+D +
Sbjct: 111 LHPMEHEFYEDNEYISSLPADAD 133


>BT007367-1|AAP36031.1|  868|Homo sapiens programmed cell death 6
           interacting protein protein.
          Length = 868

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
           PP+    Q+   AP P P QP   +PQ    PPQ SYYPQ
Sbjct: 834 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 867


>BC068454-1|AAH68454.1|  873|Homo sapiens PDCD6IP protein protein.
          Length = 873

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
           PP+    Q+   AP P P QP   +PQ    PPQ SYYPQ
Sbjct: 839 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 872


>BC025688-1|AAH25688.1|  377|Homo sapiens mucin 7, secreted protein.
          Length = 377

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 18/45 (40%), Positives = 20/45 (44%)
 Frame = +1

Query: 196 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPP 330
           PP    P  T  APP P       P    APP +S  P+ T APP
Sbjct: 202 PPSSSAPPETTAAPPTP-------PATTPAPPSSSAPPETTAAPP 239


>BC020066-1|AAH20066.1|  868|Homo sapiens programmed cell death 6
           interacting protein protein.
          Length = 868

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
           PP+    Q+   AP P P QP   +PQ    PPQ SYYPQ
Sbjct: 834 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 867


>AK002122-1|BAA92092.1|  617|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11260 fis, clone PLACE1009060, weakly similar to
           BRO1 PROTEIN. ).
          Length = 617

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
           PP+    Q+   AP P P QP   +PQ    PPQ SYYPQ
Sbjct: 583 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 616


>AF349951-1|AAK20398.1|  868|Homo sapiens HP95 protein.
          Length = 868

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
           PP+    Q+   AP P P QP   +PQ    PPQ SYYPQ
Sbjct: 834 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 867


>AF250394-1|AAQ14260.1|  868|Homo sapiens dopamine receptor
           interacting protein 4 protein.
          Length = 868

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
           PP+    Q+   AP P P QP   +PQ    PPQ SYYPQ
Sbjct: 834 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 867


>AF151793-1|AAF08220.1|  868|Homo sapiens ALG-2 interacting protein
           1 protein.
          Length = 868

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
           PP+    Q+   AP P P QP   +PQ    PPQ SYYPQ
Sbjct: 834 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 867


>AB037796-1|BAA92613.1|  546|Homo sapiens KIAA1375 protein protein.
          Length = 546

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 196 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 312
           PP+    Q+   AP P P QP   +PQ    PPQ SYYPQ
Sbjct: 512 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 545


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.312    0.131    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,260,997
Number of Sequences: 237096
Number of extensions: 2375527
Number of successful extensions: 5698
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5661
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)