Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0779
         (400 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    25   0.36 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.36 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.36 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   3.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   5.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   5.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   5.9  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.6 bits (51), Expect = 0.36
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 232 ADALLPCSVWGPSCDALDCVMESALLPPLDA 324
           + A +   +W P+CD L    +  + P  DA
Sbjct: 227 SQAWISVHIWSPNCDKLSSTEQLFIRPMYDA 257


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.36
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 232 ADALLPCSVWGPSCDALDCVMESALLPPLDA 324
           + A +   +W P+CD L    +  + P  DA
Sbjct: 460 SQAWISVHIWSPNCDKLSSTEQLFIRPMYDA 490


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.36
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 232 ADALLPCSVWGPSCDALDCVMESALLPPLDA 324
           + A +   +W P+CD L    +  + P  DA
Sbjct: 460 SQAWISVHIWSPNCDKLSSTEQLFIRPMYDA 490


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 41  PGATSRPPPTRS 76
           PGATS+PP   S
Sbjct: 121 PGATSQPPTDNS 132


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = +1

Query: 85  VHSKREIPAKEGEDADTHTMYF 150
           +  + E+ +K+G   D H  +F
Sbjct: 32  IQKRSELDSKDGHVIDEHDQFF 53


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = +1

Query: 85  VHSKREIPAKEGEDADTHTMYF 150
           +  + E+ +K+G   D H  +F
Sbjct: 32  IQKRSELDSKDGHVIDEHDQFF 53


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = +1

Query: 85  VHSKREIPAKEGEDADTHTMYF 150
           +  + E+ +K+G   D H  +F
Sbjct: 32  IQKRSELDSKDGHVIDEHDQFF 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,553
Number of Sequences: 336
Number of extensions: 1252
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)