Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0779
(400 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0142 - 21107878-21109104 86 1e-17
04_01_0200 + 2400929-2402161 81 2e-16
02_03_0240 - 16739628-16740369,16740392-16740978 58 2e-09
02_03_0038 - 14220885-14221000,14221120-14221198,14221538-142216... 32 0.15
03_06_0045 - 31259107-31259385,31259509-31259745,31260427-312604... 29 1.4
07_01_0703 - 5295561-5297523,5299344-5299462 29 1.8
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 29 1.8
03_05_0884 - 28487013-28487271,28487355-28487516,28487594-284878... 29 1.8
10_08_0666 - 19691985-19692216,19692327-19692404,19692508-196928... 28 2.4
10_08_0570 + 18851451-18851723,18851894-18851928,18851929-188519... 28 2.4
11_03_0121 - 10275312-10275568,10277520-10277595,10277854-10277919 28 3.1
07_01_0917 + 7735696-7735896,7735907-7736404,7736481-7736813,773... 28 3.1
08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224 27 4.1
12_02_1278 + 27501180-27501190,27502661-27502675,27503299-275034... 27 5.5
11_01_0333 + 2490132-2491007 27 7.2
07_03_0971 + 23038409-23039134,23040321-23040611 27 7.2
04_04_0561 - 26250488-26251451,26251499-26251620 27 7.2
01_01_0613 - 4571689-4572348 27 7.2
01_01_0079 - 603019-603129,603302-603367,603489-603554,603681-60... 27 7.2
12_02_0370 + 18139557-18140469,18140561-18140704,18140804-181409... 26 9.5
09_03_0118 - 12492206-12492415,12492746-12492816,12493611-124936... 26 9.5
>09_06_0142 - 21107878-21109104
Length = 408
Score = 85.8 bits (203), Expect = 1e-17
Identities = 51/119 (42%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Frame = +1
Query: 28 VVAEPGRYFXXXXXXXXXMVHSKREIPAKEGEDADTHTMYFINDGVYGSFNCVLYDHQIV 207
V+ EPGRYF V KR GE + Y+I+DG+YGS NC+L DH +
Sbjct: 275 VIGEPGRYFAETAFTLAARVIGKRT----RGELRE----YWIDDGLYGSLNCILMDHYVP 326
Query: 208 SAEPL------HDRADALLPCS-VWGPSCDALDCVMESALLPPLDAGDWLVFRDMGAYT 363
PL D A S V+GP+CD+LD V+ LP + GDWLVF DMGAYT
Sbjct: 327 RPRPLAAAAAGEDTTAATTHASTVFGPTCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYT 385
>04_01_0200 + 2400929-2402161
Length = 410
Score = 81.4 bits (192), Expect = 2e-16
Identities = 45/117 (38%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Frame = +1
Query: 19 TRRVVAEPGRYFXXXXXXXXXMVHSKREIPAKEGEDADTHTMYFINDGVYGSFNCVLYDH 198
T ++ EPGRYF V KR + G+ + Y+I+DGVYGS NC+L D
Sbjct: 279 TVELIGEPGRYFAETAFTLAARVIGKR----RRGDVRE----YWIDDGVYGSLNCILLDS 330
Query: 199 QIVSAEPLHDR--ADALLPCSVWGPSCDALDCVMESALLPPLDAGDWLVFRDMGAYT 363
+ PL + +V+GP+CD++D V+ LP + DWLVF DMGAYT
Sbjct: 331 YVPRPRPLAGARPGEETHASTVFGPTCDSIDTVVTGYQLPEMSVDDWLVFDDMGAYT 387
>02_03_0240 - 16739628-16740369,16740392-16740978
Length = 442
Score = 58.4 bits (135), Expect = 2e-09
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Frame = +1
Query: 28 VVAEPGRYFXXXXXXXXXMVHSKREIPAKEGEDADTHTMYFINDGVYGSFNCVLYDHQIV 207
V+AEPGRYF + KR GE + Y+I+DG++G+ CV +++ +
Sbjct: 294 VIAEPGRYFAETAFALAARIFGKRT----RGEVRE----YWIDDGMFGTLCCVHFENYVP 345
Query: 208 SAEPLHDRAD------ALL----------------PCSVWGPSCDALDCVMESALLPPLD 321
P+ AD A + P +V+GP+ D+ D V+ LP L
Sbjct: 346 RPAPVTATADDGDEQAATMGGEMMITSTNTSTKTHPSTVFGPTLDSFDEVVRGYQLPELC 405
Query: 322 AGDWLVFRDMGAYT 363
GDWLVF D+GAYT
Sbjct: 406 TGDWLVFDDVGAYT 419
>02_03_0038 -
14220885-14221000,14221120-14221198,14221538-14221641,
14221869-14222049,14224747-14224836,14224906-14225025,
14225343-14225528,14225678-14225839,14226958-14227002
Length = 360
Score = 32.3 bits (70), Expect = 0.15
Identities = 29/111 (26%), Positives = 43/111 (38%)
Frame = +1
Query: 28 VVAEPGRYFXXXXXXXXXMVHSKREIPAKEGEDADTHTMYFINDGVYGSFNCVLYDHQIV 207
++ EPGR V + K D I +YG++ + ++V
Sbjct: 81 LIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHI----ELV 136
Query: 208 SAEPLHDRADALLPCSVWGPSCDALDCVMESALLPPLDAGDWLVFRDMGAY 360
S P D A + GP C++ D + + LP D G LV D GAY
Sbjct: 137 SPSP--DAEVATF--DIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAY 183
>03_06_0045 -
31259107-31259385,31259509-31259745,31260427-31260477,
31260541-31260908,31260992-31261250
Length = 397
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 299 ARCCRHWTPGTGSCFGTWERTPSR 370
ARCC HW PG + G +T R
Sbjct: 6 ARCCGHWPPGAAAADGMLWQTELR 29
>07_01_0703 - 5295561-5297523,5299344-5299462
Length = 693
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = -2
Query: 384 KGDDDRDGVRSHVPKHEPVPGVQWRQQRALHDAVQRVTARAPHRARQQRVRPIV 223
K D DGV+ H+ + V W+ ALH AV ++ A + R R ++++ IV
Sbjct: 638 KEDMILDGVQ-HLTSLKEVRLRGWKHNSALHRAVDQLKAHSMSRHRSEQLKIIV 690
>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 166 YGSFNCVLYDHQIVSAEPLHDRADALLPCSVWGPSCDALDCVMESALLPPLDAGDWLVFR 345
YG +YDH ++S + + A+ L P A + LL + G WL+ R
Sbjct: 1024 YGPLKLQVYDHDVLSRDDIMGEAEVDLQ-----PMITAAMAFGDPGLLSDMQIGRWLMSR 1078
Query: 346 D 348
D
Sbjct: 1079 D 1079
>03_05_0884 -
28487013-28487271,28487355-28487516,28487594-28487802,
28488490-28488630,28488876-28489071,28489207-28489379,
28490095-28490142,28490301-28490378,28490526-28490792,
28491689-28491842,28491928-28492064,28492459-28492536,
28493039-28493216,28493589-28493803,28494063-28494422,
28494497-28494973,28495561-28495665,28495838-28496020,
28496105-28496263,28496937-28497154,28497737-28497905,
28498262-28498568,28498699-28498826,28498902-28499060,
28499194-28499364,28500258-28500376,28500604-28500853,
28501007-28501759
Length = 1950
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 241 LLPCSVWGPSCDALDCVMESALLPPLDAGD 330
LLP P+C AL + +ALL LD D
Sbjct: 101 LLPLLAAAPTCPALSSALSAALLAALDVAD 130
>10_08_0666 -
19691985-19692216,19692327-19692404,19692508-19692837,
19692913-19693158,19693224-19693483,19694469-19695023
Length = 566
Score = 28.3 bits (60), Expect = 2.4
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +1
Query: 103 IPAKEGEDADTHTMYFIND-GVYGSFN--CVLYDHQIVSAEPLHDRADALLPCSVWGPSC 273
+PA G D DT T+ I D G+ G+++ C +S + LH AD+L +++ C
Sbjct: 436 VPATGGGDTDTDTLPAIYDRGLIGAYHDWCEPLPTPALSYDLLH--ADSLF--TMYRDRC 491
Query: 274 DALDCVMESALLPPLDAGDWLVFRD 348
D D ++E + L G ++ RD
Sbjct: 492 DMEDILLEMDRI--LRPGRAVIIRD 514
>10_08_0570 +
18851451-18851723,18851894-18851928,18851929-18851998,
18852089-18852187,18852276-18852365,18852430-18852920,
18853015-18853102,18853204-18853245,18853548-18853574,
18853817-18853996,18854249-18854416,18854501-18854710
Length = 590
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 296 RARCCRHWTPGTGSCFGTWERTPSRSSSPFNG 391
R C R + G+G +WER R S P+ G
Sbjct: 27 RGGCGRSYGRGSGGSSRSWERERRRQSEPWEG 58
>11_03_0121 - 10275312-10275568,10277520-10277595,10277854-10277919
Length = 132
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1
Query: 265 PSCDALDCVMESALLP-PLDAGDWL 336
PSC +LDCV S L+P + G W+
Sbjct: 13 PSCSSLDCVQVSDLVPVDIRPGAWV 37
>07_01_0917 +
7735696-7735896,7735907-7736404,7736481-7736813,
7736991-7737314,7737367-7737836,7738165-7738447,
7738527-7738640
Length = 740
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 35 PSPGATSRPPPTRSQP 82
P P +SRPPPTR P
Sbjct: 435 PRPAPSSRPPPTRPHP 450
>08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224
Length = 787
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 226 DRADALLPCSVWGPSCDALDC--VMESALLPPLDAGDWL 336
D AL+ S+ GP+CD+ C E +L LD G L
Sbjct: 50 DLGIALIKASIDGPACDSFKCGTTEERGILVCLDCGSSL 88
>12_02_1278 +
27501180-27501190,27502661-27502675,27503299-27503410,
27504340-27504439,27504579-27504641,27505208-27505318,
27505405-27505589,27506002-27506140,27506374-27506491,
27506568-27506669,27506904-27507158,27507315-27507426,
27507588-27507614
Length = 449
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 106 PAKEGEDADTHTMYFINDGVYGSFNCVLYDHQIVSAEPL 222
P GE+ D + ++F++D G + D + +SA+P+
Sbjct: 383 PGVSGEEDDGYLIFFVHDENTGKSEVNVIDAKTMSADPV 421
>11_01_0333 + 2490132-2491007
Length = 291
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 2 LVPNSARGAW*PSPGATSRPPPTRSQPW 85
+V + AR A PSP PPP R+ W
Sbjct: 58 VVDSLARAAARPSPSPPPPPPPRRTVSW 85
>07_03_0971 + 23038409-23039134,23040321-23040611
Length = 338
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +2
Query: 308 CRHWTPGTGSCFGTW--ERTPSRSSSPFN 388
C+ W GTGSC T E+ P+ S S F+
Sbjct: 199 CKIWDAGTGSCLKTVIDEKKPAVSFSMFS 227
>04_04_0561 - 26250488-26251451,26251499-26251620
Length = 361
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 151 INDGVYGSFNCVLYDHQIVSAEPLHDRADALLPCSVWGPSCDALDCVMESALLPPLDAG 327
++DG S VL + + PL A A L +++G D +C M++ALLP + G
Sbjct: 292 LHDGEDASVERVLSQYMAMFDGPLPPHAIAALT-AIFGLDYDD-ECAMDAALLPLMGEG 348
>01_01_0613 - 4571689-4572348
Length = 219
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 8 PNSARGAW*PSPGATSRPPPTRSQPW 85
P SA W P A + PPP +Q W
Sbjct: 178 PTSAAPPW-SVPAAAASPPPAHAQAW 202
>01_01_0079 -
603019-603129,603302-603367,603489-603554,603681-603824,
603932-604429
Length = 294
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 8 PNSARGAW*PSPGATSRPPPTRSQP 82
PN A A PSP + P P + QP
Sbjct: 184 PNKAASASSPSPSPSPSPSPNKEQP 208
>12_02_0370 +
18139557-18140469,18140561-18140704,18140804-18140956,
18141032-18141147,18141231-18141398,18142110-18142334,
18142458-18142577
Length = 612
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 35 PSPGATSRPPPTRSQP 82
P P A S+PPP + QP
Sbjct: 79 PQPAAPSQPPPPQEQP 94
>09_03_0118 -
12492206-12492415,12492746-12492816,12493611-12493634,
12494061-12494114,12494803-12496345
Length = 633
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 4 RAEFGTRRVVAEPGRY 51
R ++G R ++AEPGRY
Sbjct: 514 RNQYGLRALIAEPGRY 529
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,239,050
Number of Sequences: 37544
Number of extensions: 170778
Number of successful extensions: 817
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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