Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0779
(400 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X66601-1|CAA47167.1| 394|Drosophila melanogaster ornithine deca... 130 7e-31
X66599-1|CAA47165.1| 394|Drosophila melanogaster ornithine dec... 129 2e-30
AY094710-1|AAM11063.1| 394|Drosophila melanogaster GH13851p pro... 129 2e-30
AE013599-568|AAF59150.1| 394|Drosophila melanogaster CG8721-PA ... 129 2e-30
X66600-1|CAA47166.1| 393|Drosophila melanogaster ornithine dec... 104 4e-23
AE013599-569|AAF59149.2| 393|Drosophila melanogaster CG8719-PA ... 103 7e-23
X78218-1|CAA55063.1| 612|Drosophila melanogaster reversed polar... 28 5.3
AY058293-1|AAL13522.1| 612|Drosophila melanogaster GH05443p pro... 28 5.3
AE014297-2469|AAF55517.1| 612|Drosophila melanogaster CG31240-P... 28 5.3
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 27 9.2
>X66601-1|CAA47167.1| 394|Drosophila melanogaster ornithine
decarboxylase protein.
Length = 394
Score = 130 bits (314), Expect = 7e-31
Identities = 63/117 (53%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
Frame = +1
Query: 28 VVAEPGRYFXXXXXXXXXMVHSKREIPAKEGEDADTHTMYFINDGVYGSFNCVLYDHQIV 207
++AEPGR+F +H+KREI + G+ DT MY++NDGVYGSFNC+LYDHQ+V
Sbjct: 262 IIAEPGRFFVAAACTLVCKIHAKREIRNEAGK-LDT-VMYYLNDGVYGSFNCILYDHQVV 319
Query: 208 SAEPLHDRADAL--LPCSVWGPSCDALDCVMESALLPPLDAGDWLVFRDMGAYTIPI 372
AE D A++L L +WGPSCDALD + E LP L+ GD L FR+MGAYT+PI
Sbjct: 320 IAEHYQDNAESLPHLKSLIWGPSCDALDQISEDLHLPNLNRGDLLGFRNMGAYTMPI 376
>X66599-1|CAA47165.1| 394|Drosophila melanogaster ornithine
decarboxylase protein.
Length = 394
Score = 129 bits (311), Expect = 2e-30
Identities = 63/117 (53%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
Frame = +1
Query: 28 VVAEPGRYFXXXXXXXXXMVHSKREIPAKEGEDADTHTMYFINDGVYGSFNCVLYDHQIV 207
++AEPGR+F +H+KREI + G+ DT MY++NDGVYGSFNC+LYDHQ+V
Sbjct: 262 IIAEPGRFFVAAACTLVCKIHAKREIRNEAGK-LDT-VMYYLNDGVYGSFNCILYDHQVV 319
Query: 208 SAEPLHDRADAL--LPCSVWGPSCDALDCVMESALLPPLDAGDWLVFRDMGAYTIPI 372
AE D A++L L +WGPSCDALD + E LP L+ GD L FR+MGAYT+PI
Sbjct: 320 IAEHYLDNAESLPHLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPI 376
>AY094710-1|AAM11063.1| 394|Drosophila melanogaster GH13851p
protein.
Length = 394
Score = 129 bits (311), Expect = 2e-30
Identities = 63/117 (53%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
Frame = +1
Query: 28 VVAEPGRYFXXXXXXXXXMVHSKREIPAKEGEDADTHTMYFINDGVYGSFNCVLYDHQIV 207
++AEPGR+F +H+KREI + G+ DT MY++NDGVYGSFNC+LYDHQ+V
Sbjct: 262 IIAEPGRFFVAAACTLVCKIHAKREIRNEAGK-LDT-VMYYLNDGVYGSFNCILYDHQVV 319
Query: 208 SAEPLHDRADAL--LPCSVWGPSCDALDCVMESALLPPLDAGDWLVFRDMGAYTIPI 372
AE D A++L L +WGPSCDALD + E LP L+ GD L FR+MGAYT+PI
Sbjct: 320 IAEHYLDNAESLPHLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPI 376
>AE013599-568|AAF59150.1| 394|Drosophila melanogaster CG8721-PA
protein.
Length = 394
Score = 129 bits (311), Expect = 2e-30
Identities = 63/117 (53%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
Frame = +1
Query: 28 VVAEPGRYFXXXXXXXXXMVHSKREIPAKEGEDADTHTMYFINDGVYGSFNCVLYDHQIV 207
++AEPGR+F +H+KREI + G+ DT MY++NDGVYGSFNC+LYDHQ+V
Sbjct: 262 IIAEPGRFFVAAACTLVCKIHAKREIRNEAGK-LDT-VMYYLNDGVYGSFNCILYDHQVV 319
Query: 208 SAEPLHDRADAL--LPCSVWGPSCDALDCVMESALLPPLDAGDWLVFRDMGAYTIPI 372
AE D A++L L +WGPSCDALD + E LP L+ GD L FR+MGAYT+PI
Sbjct: 320 IAEHYLDNAESLPHLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPI 376
>X66600-1|CAA47166.1| 393|Drosophila melanogaster ornithine
decarboxylase protein.
Length = 393
Score = 104 bits (250), Expect = 4e-23
Identities = 54/118 (45%), Positives = 79/118 (66%), Gaps = 2/118 (1%)
Frame = +1
Query: 25 RVVAEPGRYFXXXXXXXXXMVHSKREIPAKEGEDADTHTMYFINDGVYGSFNCVLYDHQI 204
R+++EPGR+F VH+KRE+ +K+G+ DT MY++NDG++G+F + Y +
Sbjct: 261 RIISEPGRFFVEAAYTLICKVHAKREVRSKDGK-LDT-MMYYLNDGIFGAFAGMFYYPEE 318
Query: 205 VSAEPLHDRADAL--LPCSVWGPSCDALDCVMESALLPPLDAGDWLVFRDMGAYTIPI 372
V+ E D A++L L +WGPSCDALD + + LLP L+ GD L FR+MGAYT+PI
Sbjct: 319 VAPELYLDEAESLPKLKSVIWGPSCDALDKISD-LLLPNLNPGDLLGFRNMGAYTMPI 375
>AE013599-569|AAF59149.2| 393|Drosophila melanogaster CG8719-PA
protein.
Length = 393
Score = 103 bits (248), Expect = 7e-23
Identities = 53/118 (44%), Positives = 79/118 (66%), Gaps = 2/118 (1%)
Frame = +1
Query: 25 RVVAEPGRYFXXXXXXXXXMVHSKREIPAKEGEDADTHTMYFINDGVYGSFNCVLYDHQI 204
R+++EPGR+F VH+KRE+ +K+G+ DT MY++NDG++G+F + Y +
Sbjct: 261 RIISEPGRFFVEAAYTLICKVHAKREVRSKDGK-LDT-MMYYLNDGIFGAFAGMFYYPEE 318
Query: 205 VSAEPLHDRADAL--LPCSVWGPSCDALDCVMESALLPPLDAGDWLVFRDMGAYTIPI 372
V+ E D A++L L +WGPSCDA+D + + LLP L+ GD L FR+MGAYT+PI
Sbjct: 319 VAPELYLDEAESLPKLKSVIWGPSCDAMDKISD-LLLPNLNPGDLLGFRNMGAYTMPI 375
>X78218-1|CAA55063.1| 612|Drosophila melanogaster reversed polarity
protein.
Length = 612
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 90 VHHGCERVGGGREVAPGLGYHAPRAE 13
VH C + GGG E++PG H A+
Sbjct: 531 VHLQCHQSGGGLELSPGASCHLVEAQ 556
>AY058293-1|AAL13522.1| 612|Drosophila melanogaster GH05443p
protein.
Length = 612
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 90 VHHGCERVGGGREVAPGLGYHAPRAE 13
VH C + GGG E++PG H A+
Sbjct: 531 VHLQCHQSGGGLELSPGASCHLVEAQ 556
>AE014297-2469|AAF55517.1| 612|Drosophila melanogaster CG31240-PA
protein.
Length = 612
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 90 VHHGCERVGGGREVAPGLGYHAPRAE 13
VH C + GGG E++PG H A+
Sbjct: 531 VHLQCHQSGGGLELSPGASCHLVEAQ 556
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 178 NCVLYDHQIVSAEPLHDRADALLPCSVWGPSCDALDCVMESALL 309
NC HQ + PL+ R D + C V D DC E A L
Sbjct: 2470 NCQAQAHQAICTCPLNSRGDPTIEC-VHIECADNDDCSGEKACL 2512
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,644,275
Number of Sequences: 53049
Number of extensions: 267116
Number of successful extensions: 1115
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -