Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0778
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    26   0.34 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    26   0.34 
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            23   1.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   1.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   3.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.5  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 235 FDKEKVKNPLTGKGIESWYSEG 300
           F+    +N + G GIE+W+S+G
Sbjct: 386 FNMVGFRNAVQGTGIENWWSDG 407


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 235 FDKEKVKNPLTGKGIESWYSEG 300
           F+    +N + G GIE+W+S+G
Sbjct: 387 FNMVGFRNAVQGTGIENWWSDG 408


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = -1

Query: 519 PSLSGGLVHFGRLSGSVPQQAEPVNVCDVFGFLSFVPENFKYL 391
           P   GG       SG+    A P+  C+  GF++  P   +++
Sbjct: 29  PEAGGGGFWLAAASGAPHPAALPIEGCNETGFINSQPSMAEFM 71


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = -1

Query: 519 PSLSGGLVHFGRLSGSVPQQAEPVNVCDVFGFLSFVPENFKYL 391
           P   GG       SG+    A P+  C+  GF++  P   +++
Sbjct: 29  PEAGGGGFWLAAASGAPHPAALPIEGCNETGFINSQPSMAEFM 71


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 235 FDKEKVKNPLTGKGIESWYSEG 300
           F+    +N +   GIE+W+S+G
Sbjct: 387 FNMVGFRNAVQETGIENWWSDG 408


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +1

Query: 106 SDADKQLLEKYRVSAFEVQVGLHELLGHGSGKLLRQNADGTFNFDKEKVK 255
           +D ++ + E     +F V     E LG G+  +L    D T   ++ K+K
Sbjct: 148 NDDEQYVWESSAGGSFTVTQDRGEPLGRGTKIVLHMKEDQTEFLEEHKIK 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.135    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,749
Number of Sequences: 336
Number of extensions: 3047
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)