Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0778
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81494-14|CAJ43905.2| 745|Caenorhabditis elegans Hypothetical p... 225 3e-59
Z81494-8|CAB54212.3| 707|Caenorhabditis elegans Hypothetical pr... 225 3e-59
Z81057-7|CAJ43903.2| 745|Caenorhabditis elegans Hypothetical pr... 225 3e-59
Z83112-4|CAN99694.1| 108|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z83112-3|CAB05540.1| 119|Caenorhabditis elegans Hypothetical pr... 29 2.4
U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical ... 29 4.2
U00049-7|AAC47054.1| 582|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z81494-14|CAJ43905.2| 745|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 745
Score = 225 bits (549), Expect = 3e-59
Identities = 111/186 (59%), Positives = 134/186 (72%)
Frame = +1
Query: 1 NIPNYDEIRQNEGFKNVSLGNVIPAAYKEYTIPFLSDADKQLLEKYRVSAFEVQVGLHEL 180
NIPNYD+IRQNEGFKNVSLGNVI A K+ + FL + D++L+ KY +FEVQVGLHEL
Sbjct: 420 NIPNYDDIRQNEGFKNVSLGNVISAQPKQ-KMNFLDEHDEELMFKYHKDSFEVQVGLHEL 478
Query: 181 LGHGSGKLLRQNADGTFNFDKEKVKNPLTGKGIESWYSEGETYDSKFTTLGSAFEECRAE 360
LGHGSGKL ++N DGTFNFD KVK+ +TG I +WY GET+ SKF L SA+EECRAE
Sbjct: 479 LGHGSGKLFQKNLDGTFNFDTNKVKDIITGAPIATWYEPGETWSSKFGPLASAYEECRAE 538
Query: 361 AVGLYLSLVPEILKIFGYEGQEAEDVTYVNWLSLLWNGAAKATEMYQPSTKTWLQAHARA 540
AVG L +IL+IFGY G A++V YVNWLS + G A E YQ K W QAH A
Sbjct: 539 AVGYVLCCDADILEIFGYTGDLAQEVKYVNWLSEIRAGLL-ALEFYQAEQKKWGQAHCYA 597
Query: 541 RFVIMR 558
R+V+ +
Sbjct: 598 RYVLTK 603
>Z81494-8|CAB54212.3| 707|Caenorhabditis elegans Hypothetical
protein F02E9.9a protein.
Length = 707
Score = 225 bits (549), Expect = 3e-59
Identities = 111/186 (59%), Positives = 134/186 (72%)
Frame = +1
Query: 1 NIPNYDEIRQNEGFKNVSLGNVIPAAYKEYTIPFLSDADKQLLEKYRVSAFEVQVGLHEL 180
NIPNYD+IRQNEGFKNVSLGNVI A K+ + FL + D++L+ KY +FEVQVGLHEL
Sbjct: 382 NIPNYDDIRQNEGFKNVSLGNVISAQPKQ-KMNFLDEHDEELMFKYHKDSFEVQVGLHEL 440
Query: 181 LGHGSGKLLRQNADGTFNFDKEKVKNPLTGKGIESWYSEGETYDSKFTTLGSAFEECRAE 360
LGHGSGKL ++N DGTFNFD KVK+ +TG I +WY GET+ SKF L SA+EECRAE
Sbjct: 441 LGHGSGKLFQKNLDGTFNFDTNKVKDIITGAPIATWYEPGETWSSKFGPLASAYEECRAE 500
Query: 361 AVGLYLSLVPEILKIFGYEGQEAEDVTYVNWLSLLWNGAAKATEMYQPSTKTWLQAHARA 540
AVG L +IL+IFGY G A++V YVNWLS + G A E YQ K W QAH A
Sbjct: 501 AVGYVLCCDADILEIFGYTGDLAQEVKYVNWLSEIRAGLL-ALEFYQAEQKKWGQAHCYA 559
Query: 541 RFVIMR 558
R+V+ +
Sbjct: 560 RYVLTK 565
>Z81057-7|CAJ43903.2| 745|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 745
Score = 225 bits (549), Expect = 3e-59
Identities = 111/186 (59%), Positives = 134/186 (72%)
Frame = +1
Query: 1 NIPNYDEIRQNEGFKNVSLGNVIPAAYKEYTIPFLSDADKQLLEKYRVSAFEVQVGLHEL 180
NIPNYD+IRQNEGFKNVSLGNVI A K+ + FL + D++L+ KY +FEVQVGLHEL
Sbjct: 420 NIPNYDDIRQNEGFKNVSLGNVISAQPKQ-KMNFLDEHDEELMFKYHKDSFEVQVGLHEL 478
Query: 181 LGHGSGKLLRQNADGTFNFDKEKVKNPLTGKGIESWYSEGETYDSKFTTLGSAFEECRAE 360
LGHGSGKL ++N DGTFNFD KVK+ +TG I +WY GET+ SKF L SA+EECRAE
Sbjct: 479 LGHGSGKLFQKNLDGTFNFDTNKVKDIITGAPIATWYEPGETWSSKFGPLASAYEECRAE 538
Query: 361 AVGLYLSLVPEILKIFGYEGQEAEDVTYVNWLSLLWNGAAKATEMYQPSTKTWLQAHARA 540
AVG L +IL+IFGY G A++V YVNWLS + G A E YQ K W QAH A
Sbjct: 539 AVGYVLCCDADILEIFGYTGDLAQEVKYVNWLSEIRAGLL-ALEFYQAEQKKWGQAHCYA 597
Query: 541 RFVIMR 558
R+V+ +
Sbjct: 598 RYVLTK 603
>Z83112-4|CAN99694.1| 108|Caenorhabditis elegans Hypothetical
protein K02B7.3b protein.
Length = 108
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 229 FNFDKEKVKNPLTGKGIESWYSEGETYDSKFT 324
FN KEK+++P T K I W +E S+FT
Sbjct: 42 FNEYKEKLQDPETHKNIREWVAEKYEAASEFT 73
>Z83112-3|CAB05540.1| 119|Caenorhabditis elegans Hypothetical
protein K02B7.3a protein.
Length = 119
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 229 FNFDKEKVKNPLTGKGIESWYSEGETYDSKFT 324
FN KEK+++P T K I W +E S+FT
Sbjct: 53 FNEYKEKLQDPETHKNIREWVAEKYEAASEFT 84
>U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical
protein F55G1.6 protein.
Length = 350
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -1
Query: 534 GVRLQPSLSGGLVHFGRLSGSVPQQAEPVNVCDVFGFLSFVPENF 400
G +L+P L HFG L + +QA + C V F +F P NF
Sbjct: 134 GYKLKPCFCRKLFHFGCLRSLIEEQAS-CSECSVI-FSAFKPANF 176
>AF078784-1|AAK18967.1| 458|Caenorhabditis elegans Hypothetical
protein H34I24.2 protein.
Length = 458
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 413 TKDKKPKTSHTLTGSACCGTEPLRRPKCTNPP 508
T P + TGS C + L RP CTN P
Sbjct: 263 TTTPNPCLAFNCTGSGPCQLDSLNRPYCTNCP 294
>U00049-7|AAC47054.1| 582|Caenorhabditis elegans Hypothetical
protein C18F10.7a protein.
Length = 582
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 211 QNADGTFNFDKEKVKNPLTGKGIESWYSEGETYDS 315
+N T D E + T +G SW+S GET ++
Sbjct: 227 RNTISTTYIDVENIGFERTSRGFLSWFSSGETNET 261
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.135 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,624,347
Number of Sequences: 27780
Number of extensions: 307816
Number of successful extensions: 996
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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