Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0777
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00757-1|CAA68726.1| 211|Homo sapiens protein ( Human mRNA for ... 72 3e-12
CR541824-1|CAG46623.1| 211|Homo sapiens SGNE1 protein. 72 3e-12
BC093053-1|AAH93053.1| 211|Homo sapiens secretogranin V (7B2 pr... 72 3e-12
AJ290438-1|CAB90397.1| 211|Homo sapiens neuroendocrine protein ... 72 3e-12
BC005349-1|AAH05349.1| 212|Homo sapiens secretogranin V (7B2 pr... 68 4e-11
U07681-1|AAA85639.1| 366|Homo sapiens NAD(H)-specific isocitrat... 36 0.21
BC021967-1|AAH21967.1| 366|Homo sapiens isocitrate dehydrogenas... 36 0.21
AL442090-1|CAC09449.1| 288|Homo sapiens hypothetical protein pr... 36 0.21
AK222973-1|BAD96693.1| 366|Homo sapiens isocitrate dehydrogenas... 36 0.21
AK124944-1|BAC86001.1| 129|Homo sapiens protein ( Homo sapiens ... 31 3.3
BC078665-1|AAH78665.1| 775|Homo sapiens GRIP and coiled-coil do... 30 7.7
BC014100-1|AAH14100.1| 775|Homo sapiens GRIP and coiled-coil do... 30 7.7
AK025688-1|BAB15218.1| 434|Homo sapiens protein ( Homo sapiens ... 30 7.7
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 30 7.7
AF525417-1|AAM91948.1| 775|Homo sapiens Golgi coiled coil prote... 30 7.7
>Y00757-1|CAA68726.1| 211|Homo sapiens protein ( Human mRNA for
polypeptide 7B2. ).
Length = 211
Score = 71.7 bits (168), Expect = 3e-12
Identities = 41/89 (46%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Frame = +2
Query: 455 EYLQHSS--LWGHQYVTGGAGEGEQRLRPSGVVPNRQMVKTDAVLP-------AYCNPPN 607
EY H + L G Q + GGA EG Q L P G +PN T +P Y +PPN
Sbjct: 59 EYPAHQAMNLVGPQSIEGGAHEGLQHLGPFGNIPNIVAELTGDNIPKDFSEDQGYPDPPN 118
Query: 608 PCPVGYTDQGCISEFENTAXFSREYQLSQ 694
PCPVG TD GC+ +TA FSRE+QL Q
Sbjct: 119 PCPVGKTDDGCLENTPDTAEFSREFQLHQ 147
>CR541824-1|CAG46623.1| 211|Homo sapiens SGNE1 protein.
Length = 211
Score = 71.7 bits (168), Expect = 3e-12
Identities = 41/89 (46%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Frame = +2
Query: 455 EYLQHSS--LWGHQYVTGGAGEGEQRLRPSGVVPNRQMVKTDAVLP-------AYCNPPN 607
EY H + L G Q + GGA EG Q L P G +PN T +P Y +PPN
Sbjct: 59 EYPAHQAMNLVGPQSIEGGAHEGLQHLGPFGNIPNIVAELTGDNIPKDFSEDQGYPDPPN 118
Query: 608 PCPVGYTDQGCISEFENTAXFSREYQLSQ 694
PCPVG TD GC+ +TA FSRE+QL Q
Sbjct: 119 PCPVGKTDDGCLENTPDTAEFSREFQLHQ 147
>BC093053-1|AAH93053.1| 211|Homo sapiens secretogranin V (7B2
protein) protein.
Length = 211
Score = 71.7 bits (168), Expect = 3e-12
Identities = 41/89 (46%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Frame = +2
Query: 455 EYLQHSS--LWGHQYVTGGAGEGEQRLRPSGVVPNRQMVKTDAVLP-------AYCNPPN 607
EY H + L G Q + GGA EG Q L P G +PN T +P Y +PPN
Sbjct: 59 EYPAHQAMNLVGPQSIEGGAHEGLQHLGPFGNIPNIVAELTGDNIPKDFSEDQGYPDPPN 118
Query: 608 PCPVGYTDQGCISEFENTAXFSREYQLSQ 694
PCPVG TD GC+ +TA FSRE+QL Q
Sbjct: 119 PCPVGKTDDGCLENTPDTAEFSREFQLHQ 147
>AJ290438-1|CAB90397.1| 211|Homo sapiens neuroendocrine protein 7B2
protein.
Length = 211
Score = 71.7 bits (168), Expect = 3e-12
Identities = 41/89 (46%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Frame = +2
Query: 455 EYLQHSS--LWGHQYVTGGAGEGEQRLRPSGVVPNRQMVKTDAVLP-------AYCNPPN 607
EY H + L G Q + GGA EG Q L P G +PN T +P Y +PPN
Sbjct: 59 EYPAHQAMNLVGPQSIEGGAHEGLQHLGPFGNIPNIVAELTGDNIPKDFSEDQGYPDPPN 118
Query: 608 PCPVGYTDQGCISEFENTAXFSREYQLSQ 694
PCPVG TD GC+ +TA FSRE+QL Q
Sbjct: 119 PCPVGKTDDGCLENTPDTAEFSREFQLHQ 147
>BC005349-1|AAH05349.1| 212|Homo sapiens secretogranin V (7B2
protein) protein.
Length = 212
Score = 67.7 bits (158), Expect = 4e-11
Identities = 43/98 (43%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Frame = +2
Query: 455 EYLQHSS--LWGHQYVTGGAGEGEQRLRPSGVVPNRQMVKTDAVLP-------AYCNPPN 607
EY H + L G Q + GGA EG Q L P G +PN T +P Y +PPN
Sbjct: 59 EYPAHQAMNLVGPQSIEGGAHEGLQHLGPFGNIPNIVAELTGDNIPKDFSEDQGYPDPPN 118
Query: 608 PCPVGYT-DQGCISEFENTAXFSREYQLSQRCMCDGXH 718
PCPVG T D GC+ +TA FSRE+QL Q + D H
Sbjct: 119 PCPVGKTADDGCLENTPDTAEFSREFQLHQH-LSDPEH 155
>U07681-1|AAA85639.1| 366|Homo sapiens NAD(H)-specific isocitrate
dehydrogenase alpha subunit precursor protein.
Length = 366
Score = 35.5 bits (78), Expect = 0.21
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Frame = +2
Query: 101 NKSYLLKNCVELIENI--YFIFVMGR-YAMLL--LAINTVAAMGFIPHGSIGAKDHLITE 265
N+ YL C+ ++++ + + VM Y +L L + +G P G+IGA I E
Sbjct: 228 NEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFE 287
Query: 266 TLLREVVERMGKDFNDAASSYLEFPASDRHLALMAHASK 382
++ + GKD + + L RH+ L HA++
Sbjct: 288 SVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAAR 326
>BC021967-1|AAH21967.1| 366|Homo sapiens isocitrate dehydrogenase 3
(NAD+) alpha protein.
Length = 366
Score = 35.5 bits (78), Expect = 0.21
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Frame = +2
Query: 101 NKSYLLKNCVELIENI--YFIFVMGR-YAMLL--LAINTVAAMGFIPHGSIGAKDHLITE 265
N+ YL C+ ++++ + + VM Y +L L + +G P G+IGA I E
Sbjct: 228 NEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFE 287
Query: 266 TLLREVVERMGKDFNDAASSYLEFPASDRHLALMAHASK 382
++ + GKD + + L RH+ L HA++
Sbjct: 288 SVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAAR 326
>AL442090-1|CAC09449.1| 288|Homo sapiens hypothetical protein
protein.
Length = 288
Score = 35.5 bits (78), Expect = 0.21
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Frame = +2
Query: 101 NKSYLLKNCVELIENI--YFIFVMGR-YAMLL--LAINTVAAMGFIPHGSIGAKDHLITE 265
N+ YL C+ ++++ + + VM Y +L L + +G P G+IGA I E
Sbjct: 150 NEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFE 209
Query: 266 TLLREVVERMGKDFNDAASSYLEFPASDRHLALMAHASK 382
++ + GKD + + L RH+ L HA++
Sbjct: 210 SVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAAR 248
>AK222973-1|BAD96693.1| 366|Homo sapiens isocitrate dehydrogenase 3
(NAD+) alpha precursor variant protein.
Length = 366
Score = 35.5 bits (78), Expect = 0.21
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Frame = +2
Query: 101 NKSYLLKNCVELIENI--YFIFVMGR-YAMLL--LAINTVAAMGFIPHGSIGAKDHLITE 265
N+ YL C+ ++++ + + VM Y +L L + +G P G+IGA I E
Sbjct: 228 NEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFE 287
Query: 266 TLLREVVERMGKDFNDAASSYLEFPASDRHLALMAHASK 382
++ + GKD + + L RH+ L HA++
Sbjct: 288 SVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAAR 326
>AK124944-1|BAC86001.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ42954 fis, clone BRSTN2008457. ).
Length = 129
Score = 31.5 bits (68), Expect = 3.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 389 PGPCSRAPSGRDGGRWP 339
PGPC P G+ GRWP
Sbjct: 85 PGPCLGTPGGKQDGRWP 101
>BC078665-1|AAH78665.1| 775|Homo sapiens GRIP and coiled-coil
domain containing 1 protein.
Length = 775
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = +2
Query: 263 ETLLREVVERMGKDFNDAASSYLEFPASDRHLALMAHASKDLENEQLDYDSLIDGNP 433
+ L R+ +ER DF D E R AL KDLE EQL +L G P
Sbjct: 560 QQLHRQELERCQLDFRDRTLKLEEELHKQRDRALAVLTEKDLELEQLRSVALASGLP 616
>BC014100-1|AAH14100.1| 775|Homo sapiens GRIP and coiled-coil
domain containing 1 protein.
Length = 775
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = +2
Query: 263 ETLLREVVERMGKDFNDAASSYLEFPASDRHLALMAHASKDLENEQLDYDSLIDGNP 433
+ L R+ +ER DF D E R AL KDLE EQL +L G P
Sbjct: 560 QQLHRQELERCQLDFRDRTLKLEEELHKQRDRALAVLTEKDLELEQLRSVALASGLP 616
>AK025688-1|BAB15218.1| 434|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22035 fis, clone HEP08838. ).
Length = 434
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = +2
Query: 263 ETLLREVVERMGKDFNDAASSYLEFPASDRHLALMAHASKDLENEQLDYDSLIDGNP 433
+ L R+ +ER DF D E R AL KDLE EQL +L G P
Sbjct: 219 QQLHRQELERCQLDFRDRTLKLEEELHKQRDRALAVLTEKDLELEQLRSVALASGLP 275
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 30.3 bits (65), Expect = 7.7
Identities = 23/81 (28%), Positives = 33/81 (40%)
Frame = +3
Query: 456 STCSTVRCGATST*QAVLARVSSVSDHRAWSLTDKWSKLTPFCPRIATRPTHAPSGTQTR 635
ST ST TST A +S HR S + L P + PT + + T
Sbjct: 1093 STPSTTSAPTTSTTSAPTTSTTSAPTHRTTSGPTTSTTLAP-TTSTTSAPTTSTNSAPTT 1151
Query: 636 DASASSRTQPXSVASTSCLSA 698
++S T S +TS +S+
Sbjct: 1152 STISASTTSTISAPTTSTISS 1172
>AF525417-1|AAM91948.1| 775|Homo sapiens Golgi coiled coil protein
1 protein.
Length = 775
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = +2
Query: 263 ETLLREVVERMGKDFNDAASSYLEFPASDRHLALMAHASKDLENEQLDYDSLIDGNP 433
+ L R+ +ER DF D E R AL KDLE EQL +L G P
Sbjct: 560 QQLHRQELERCQLDFRDRTLKLEEELHKQRDRALAVLTEKDLELEQLRSVALASGLP 616
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,526,676
Number of Sequences: 237096
Number of extensions: 2773395
Number of successful extensions: 13564
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 12446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13553
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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