Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0777
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92838-2|CAB07408.1| 211|Caenorhabditis elegans Hypothetical pr... 124 5e-29
AF022976-8|AAC69087.2| 366|Caenorhabditis elegans Serpentine re... 30 1.5
U53139-9|AAW88402.1| 379|Caenorhabditis elegans Serpentine rece... 29 2.7
U53139-8|AAK18938.3| 338|Caenorhabditis elegans Serpentine rece... 29 2.7
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41032-5|AAQ62460.1| 403|Caenorhabditis elegans Protein kinase ... 29 4.7
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ... 29 4.7
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 29 4.7
AL132858-16|CAB60486.2| 538|Caenorhabditis elegans Hypothetical... 29 4.7
AL117207-25|CAB61042.2| 538|Caenorhabditis elegans Hypothetical... 29 4.7
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 28 6.2
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 28 6.2
Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical pr... 28 6.2
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 28 8.1
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 28 8.1
>Z92838-2|CAB07408.1| 211|Caenorhabditis elegans Hypothetical
protein T03D8.3 protein.
Length = 211
Score = 124 bits (300), Expect = 5e-29
Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Frame = +2
Query: 446 RDQEYLQHSSLWGHQYVTGGAGEGEQRLRPSGVVPNRQMVKTDAVLPAYCNPPNPCPVGY 625
RD E L S +G ++++GGAGEGEQ+L RQ VK D VLPAYC PPNPCPVG+
Sbjct: 41 RDSENLPDLSSFGVKHISGGAGEGEQKLLEEDNFQERQEVKVDNVLPAYCEPPNPCPVGF 100
Query: 626 T-DQGCISEFENTAXFSREYQLSQRCMCDGXHMFSC 730
T + GC+ EFEN+A FSR YQ Q C+CD HMF+C
Sbjct: 101 TKEHGCLEEFENSAEFSRNYQADQHCICDQEHMFNC 136
>AF022976-8|AAC69087.2| 366|Caenorhabditis elegans Serpentine
receptor, class w protein107 protein.
Length = 366
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = +2
Query: 53 IVTFYNYLAVLSESS*NKSYLLKNCVELIENIYFIFVMGRYAMLLLAINTV 205
+ +F N L++L + + +++L C+ LI NI+ V+ R +M + ++N +
Sbjct: 10 VQSFQNVLSLLEDDAFLVNFILA-CISLIANIFHFVVITRKSMRISSVNVL 59
>U53139-9|AAW88402.1| 379|Caenorhabditis elegans Serpentine
receptor, class w protein68, isoform b protein.
Length = 379
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/51 (27%), Positives = 34/51 (66%)
Frame = +2
Query: 53 IVTFYNYLAVLSESS*NKSYLLKNCVELIENIYFIFVMGRYAMLLLAINTV 205
+++ N ++ + ESS N ++L +CV ++ NI+ +F++ R +M+ +I+ +
Sbjct: 20 LMSIGNSISKIKESSLNIFFVL-SCVGVVVNIFHLFILTRKSMVNNSIHVM 69
>U53139-8|AAK18938.3| 338|Caenorhabditis elegans Serpentine
receptor, class w protein68, isoform a protein.
Length = 338
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/51 (27%), Positives = 34/51 (66%)
Frame = +2
Query: 53 IVTFYNYLAVLSESS*NKSYLLKNCVELIENIYFIFVMGRYAMLLLAINTV 205
+++ N ++ + ESS N ++L +CV ++ NI+ +F++ R +M+ +I+ +
Sbjct: 20 LMSIGNSISKIKESSLNIFFVL-SCVGVVVNIFHLFILTRKSMVNNSIHVM 69
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical protein
ZC84.1 protein.
Length = 1556
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +2
Query: 428 NPSPSLRDQEYLQHSSLWGHQYVTGGAGEGEQRLRPSGVVPNRQMVKTDAVLPAYCNP-P 604
NP + E+ SL +Y G+ RPS PN Q+ DA C+
Sbjct: 1029 NPPNAPCPSEFTCQWSLSNQRYQCCGSNPAPTPQRPSDGCPNAQIAFRDADAVRVCSAGA 1088
Query: 605 NPCPVGY 625
CP GY
Sbjct: 1089 ANCPAGY 1095
>U41032-5|AAQ62460.1| 403|Caenorhabditis elegans Protein kinase
protein 25, isoformc protein.
Length = 403
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 621 GTQTRDASASSRTQPXSVASTSCLS 695
GTQ R A +SSR P + ASTS S
Sbjct: 298 GTQQRQAGSSSRAVPPASASTSAAS 322
>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
protein 25, isoformb protein.
Length = 1130
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 621 GTQTRDASASSRTQPXSVASTSCLS 695
GTQ R A +SSR P + ASTS S
Sbjct: 1025 GTQQRQAGSSSRAVPPASASTSAAS 1049
>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
protein 25, isoforma protein.
Length = 1237
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 621 GTQTRDASASSRTQPXSVASTSCLS 695
GTQ R A +SSR P + ASTS S
Sbjct: 1132 GTQQRQAGSSSRAVPPASASTSAAS 1156
>AL132858-16|CAB60486.2| 538|Caenorhabditis elegans Hypothetical
protein Y113G7A.5 protein.
Length = 538
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 377 SRAPSGRDGGRWPGTLGSWTPRR*SLCP 294
S S DGG WP T W R CP
Sbjct: 430 SECASPEDGGEWPKTRTEWAERTYVECP 457
>AL117207-25|CAB61042.2| 538|Caenorhabditis elegans Hypothetical
protein Y113G7A.5 protein.
Length = 538
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 377 SRAPSGRDGGRWPGTLGSWTPRR*SLCP 294
S S DGG WP T W R CP
Sbjct: 430 SECASPEDGGEWPKTRTEWAERTYVECP 457
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 630 TRDASASSRTQPXSVASTSCLSAACAMXXICS 725
T S + T+P + ST+C SA C +C+
Sbjct: 271 TNPPSMGTTTKPPAAPSTACGSATCTSTQVCA 302
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 630 TRDASASSRTQPXSVASTSCLSAACAMXXICS 725
T S + T+P + ST+C SA C +C+
Sbjct: 271 TNPPSMGTTTKPPAAPSTACGSATCTSTQVCA 302
>Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical
protein F14D7.2 protein.
Length = 457
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 310 RRGVQLPRVPGQRPPSRPDGAREQGPGE 393
+R Q+P P +RP S P G R P +
Sbjct: 219 KRETQIPNYPRRRPDSDPPGGRVTSPSD 246
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin
receptor protein 2 protein.
Length = 1338
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 611 CPVGYTDQGCISEFENTAXFSREYQLSQRCMCDGXHMFSCPSDST 745
CP GY Q C E ++T + + +QR FSCP+D T
Sbjct: 209 CPNGYGGQTC--ETQST---TNQQASTQRTCGSNDFQFSCPNDQT 248
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 611 CPVGYTDQGCISEFENTAXFSREYQLSQRCMCDGXHMFSCPSDST 745
CP GY Q C E ++T + + +QR FSCP+D T
Sbjct: 209 CPNGYGGQTC--ETQST---TNQQASTQRTCGSNDFQFSCPNDQT 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,594,025
Number of Sequences: 27780
Number of extensions: 400119
Number of successful extensions: 1209
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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