Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0776
(730 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 42 4e-04
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 42 6e-04
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 41 0.001
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 37 0.012
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 37 0.016
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 36 0.036
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 31 1.0
At5g53510.1 68418.m06650 oligopeptide transporter OPT family pro... 30 1.4
At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc f... 30 1.4
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 29 3.2
At1g14850.1 68414.m01776 non-repetitive/WGA-negative nucleoporin... 29 3.2
At3g55350.1 68416.m06147 expressed protein 28 5.5
At4g14360.1 68417.m02212 dehydration-responsive protein-related ... 28 7.3
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/92 (25%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +1
Query: 160 YGIEDIPVDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFT-SLRSKHPDVKFMV 336
+ + DI L THL +F + ++++V + ++ F FT +++ ++P VK ++
Sbjct: 39 FPVTDIDSSLFTHLFCAFADLNSQTNQVTVSS----ANQPKFSTFTQTVQRRNPSVKTLL 94
Query: 337 AVGGWAEGGSKYSHMVAQKSTRMSFIRRGCRL 432
++GG + Y+ M + ++R SFI R+
Sbjct: 95 SIGGGIADKTAYASMASNPTSRKSFIDSSIRV 126
Score = 37.9 bits (84), Expect = 0.007
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +2
Query: 437 KKYDFDGLDLDWEYPGAADRGGSFSDKDEFLYFVQELKRAFI-RADRGWE----LTAAVP 601
+ Y F GLDLDWEYP +A ++ F ++E + A + A + L AAV
Sbjct: 128 RSYGFHGLDLDWEYPSSA------TEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVF 181
Query: 602 LANFRLMEGYHVPELCQELDAIHVMSYD 685
+N Y V + LD +++M+YD
Sbjct: 182 YSNNYYSVLYPVSAVASSLDWVNLMAYD 209
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 41.5 bits (93), Expect = 6e-04
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Frame = +2
Query: 425 VDFLKKYDFDGLDLDWEYPGAADRGGSFSDKDEFLYFVQELKRAFI-RADRGWE----LT 589
+D +K DF GLDL WEYP +F V+E + A + +DR + LT
Sbjct: 112 IDIARKKDFYGLDLAWEYPSNDVEMANFGK------LVKEWRAAVVEESDRTNQLPLLLT 165
Query: 590 AAVPLANFRLMEGYHVPELCQELDAIHVMSYD 685
AAV + E Y V + LD +++M+YD
Sbjct: 166 AAVYYSPDYYGEEYPVQAIADNLDFVNIMAYD 197
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 425 VDFLKKYDFDGLDLDWEYPGAADRGGSFSD-KDEFLYFVQELKRAFIRADRGWELTAAVP 601
+ + Y FDGLDLDWEYP A F++ E+ Y VQ A+ LTA V
Sbjct: 16 ISIARSYGFDGLDLDWEYPRNAAEMSDFAELLKEWRYAVQ--GEAYSSELPVLILTATVY 73
Query: 602 LANFRLMEGYHVPELCQELDAIHVMSYD 685
++ Y V + + LD +++ +YD
Sbjct: 74 YSSNYNGVVYPVKFISELLDWVNIKAYD 101
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 172 DIPVDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFT-SLRSKHPDVKFMVAVGG 348
DI L THL +F + +S E+ I +++ F FT +++ ++P VK ++++GG
Sbjct: 22 DIDSSLFTHLFCTFADLEAESYEITIAT----WNQAPFHAFTETVQQRNPHVKTLLSIGG 77
Query: 349 WAEGGSKYSHMVAQKSTRMSFIR 417
++ M + +R SFI+
Sbjct: 78 GNADKDAFASMASNPDSRASFIQ 100
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 416 EEVVDFLKKYDFDGLDLDWEYPGAADRGGSFSD-KDEFLYFVQELKRAFIRADRGWELTA 592
+ + + Y F GLDLDWEYP + F +E+ V+ + LTA
Sbjct: 100 QSTITVARSYGFHGLDLDWEYPRNEEEMYDFGKLLEEWRSAVEAESNS--SGTTALILTA 157
Query: 593 AVPLANFRLMEGYHVPELCQELDAIHVMSYD 685
AV ++ Y V + LD I++M+YD
Sbjct: 158 AVYYSSNYQGVPYPVLAISNSLDWINLMAYD 188
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 187 LCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNFTSL-RSKHPDVKFMVAVGGWAEGG 363
L THL +F + +++ V++ + F NFT + + K+P V+ ++++GG
Sbjct: 37 LFTHLFCAFADLDPQTNSVVVSGAH----EQEFSNFTKIVKKKNPHVQTLLSIGGRNADK 92
Query: 364 SKYSHMVAQKSTRMSFI 414
S ++ M + ++R SFI
Sbjct: 93 SAFASMASNPTSRKSFI 109
Score = 32.3 bits (70), Expect = 0.34
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 443 YDFDGLDLDWEYPGAADRGGSFSDKDEFLYFVQELKRAFIRADR-GWELTAAVPLANFRL 619
Y FDGLDL W+YP +F E + + ++ R +R LTAAV +
Sbjct: 119 YRFDGLDLVWKYPKDDVEMRNFGQLLE--QWREAIEDDAERTERMPLLLTAAVYYSPVYD 176
Query: 620 MEGYHVPELCQELDAIHVMSYD 685
Y + E+ ++LD +++++YD
Sbjct: 177 SVSYPIREIKKKLDWVNLIAYD 198
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 35.5 bits (78), Expect = 0.036
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Frame = +2
Query: 425 VDFLKKYDFDGLDLDWEYPGAADRGGSFSDKDEFLYFVQELKRAFI-RADRGWE----LT 589
+D +K DF GLDL WEYP + + F ++E + A + +D+ + LT
Sbjct: 120 IDIARKKDFYGLDLAWEYP------SNDVEMTNFGKLLEEWRAAVVEESDKTNQLPLLLT 173
Query: 590 AAVPLANFRLMEGYHVPELCQELDAIHVMSYD 685
AAV + Y V + LD +++M+YD
Sbjct: 174 AAVYYSPQYDGVEYPVKAIADNLDFVNIMAYD 205
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 30.7 bits (66), Expect = 1.0
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +2
Query: 449 FDGLDLDWEYPGAADRGGSFSDKDEFLYFVQELKRAFIRADRGWE-----LTAAVPLANF 613
F GLDL WEYP S + +F V EL+ A R LTAAV ++
Sbjct: 123 FHGLDLAWEYP------YSDHEMTDFGNLVGELRAAVEAESRRSSKPTLLLTAAVYYSSV 176
Query: 614 RLMEGYHVPELCQELDAIHVMSYD 685
Y V + + LD +++++YD
Sbjct: 177 YKTFTYPVQVMRESLDWVNIIAYD 200
>At5g53510.1 68418.m06650 oligopeptide transporter OPT family
protein similar to SP|P40900 Sexual differentiation
process protein isp4 {Schizosaccharomyces pombe},
oligopeptide transporter Opt1p [Candida albicans]
GI:2367386; contains Pfam profile PF03169: OPT
oligopeptide transporter protein
Length = 741
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 389 WATMCEYLEPPSAQPPTATMNLTSG 315
WAT+ YL P A P AT+N+T G
Sbjct: 272 WATISSYLGSPLASPLFATINVTIG 296
>At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc
finger (ZZ type) family protein contains Pfam profiles
PF02135: TAZ zinc finger, PF00569: Zinc finger, ZZ type
Length = 1706
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 296 HPSAPNTPMSSSWSRLAVGLKAAPSTHTWWPRRA 397
HP + S+S+S LAVG+K+ S WP ++
Sbjct: 534 HPQNIGSDSSNSFSNLAVGVKSESSPQGQWPSKS 567
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 29.1 bits (62), Expect = 3.2
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +2
Query: 425 VDFLKKYDFDGLDLDWEYPGAADRGGSFSD-KDEFLYFVQ-ELKRAFIRADRGWELTAAV 598
+ + F GLDL WEYP +F E+ V+ E +R IR LTAAV
Sbjct: 94 ISIARSLGFYGLDLAWEYPNNDVEMNNFGKLLQEWRSAVEVESQRTGIRP---LLLTAAV 150
Query: 599 PLANFRLMEGYHVPELCQELDAIHVMSYD 685
+ Y V + + LD +++++Y+
Sbjct: 151 YYTSDYNSVSYPVQAINRSLDWVNLIAYE 179
>At1g14850.1 68414.m01776 non-repetitive/WGA-negative nucleoporin
family protein contains Pfam profile: PF03177
non-repetitive/WGA-negative nucleoporin
Length = 1464
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +2
Query: 482 GAADRGGSFSDKDEFL-YFVQELKRAFIRAD---RGWELTAAVPLANFRLMEGYHVPELC 649
GA GG ++K + L Y EL +RA R L +A L +L+ +HV L
Sbjct: 757 GAYSNGGESANKRQRLPYSPAELAATEVRAMECIRQLLLRSAEALFLLQLLSQHHVARLV 816
Query: 650 QELDA 664
QELDA
Sbjct: 817 QELDA 821
>At3g55350.1 68416.m06147 expressed protein
Length = 406
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 214 IGVTEKSSEVLIIDPELDVDKSGFRNFT-SLRSK-HPDVKFMVAVGGWAEGGSKYSHMVA 387
I +T + ++P V G +NF+ +L++ PD++F+ + GW GS +V
Sbjct: 187 IDITHIVMNLPAVEPSNKVWLDGEKNFSMTLQAVVDPDMRFLDVIAGWP--GSLNDDVVL 244
Query: 388 QKSTRMSFIRRGCRL 432
+ S + +G RL
Sbjct: 245 KNSGFYKLVEKGKRL 259
>At4g14360.1 68417.m02212 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 608
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 416 EEVVDFLKKYDFDGLDLDWEYPGAADRGGSFSDKDEFLYFVQE 544
+ VVDF+KKY L WE G S D D ++ VQ+
Sbjct: 556 QRVVDFVKKYL---KALHWEEVGTKTDSDSDQDSDNVVFIVQK 595
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,323,164
Number of Sequences: 28952
Number of extensions: 352605
Number of successful extensions: 994
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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