Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0775
         (717 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8T101 Cluster: Titin-like protein; n=4; Endopterygota|...    71   2e-11
UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu...    66   6e-10
UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein F2...    50   8e-05
UniRef50_Q10126 Cluster: Uncharacterized protein F52C9.6; n=7; C...    44   0.004
UniRef50_P07254 Cluster: Chitinase A precursor; n=36; root|Rep: ...    35   1.7  
UniRef50_Q9RQJ3 Cluster: Chitinase; n=3; root|Rep: Chitinase - A...    33   7.0  
UniRef50_A4A8U3 Cluster: Putative uncharacterized protein; n=1; ...    33   9.3  

>UniRef50_Q8T101 Cluster: Titin-like protein; n=4; Endopterygota|Rep:
            Titin-like protein - Bombyx mori (Silk moth)
          Length = 3354

 Score = 71.3 bits (167), Expect = 2e-11
 Identities = 40/71 (56%), Positives = 41/71 (57%)
 Frame = +1

Query: 328  STDRHRPLQLFATEQDFRLLSSSXXXXXXXXXXXXXXLRASRTAFSNSRSPLKNAFNPTV 507
            ST RH+P QL ATE D R L SS              LRAS TAFSNSRSP KNA  P  
Sbjct: 816  STARHKPPQLLATEHDPRFLPSSSYQPPSQIITPLS-LRASCTAFSNSRSPFKNALTPMA 874

Query: 508  IGCPAKTTSPL 540
            IGCPA   SPL
Sbjct: 875  IGCPANMASPL 885


>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
           nubilalis|Rep: Reverse transcriptase - Ostrinia
           nubilalis (European corn borer)
          Length = 497

 Score = 66.5 bits (155), Expect = 6e-10
 Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 4/50 (8%)
 Frame = -1

Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSDD----GGAGWL 403
           QWAG  +R  D RW ++VLEWRPR G+RS GRP  RW+DD     G+ W+
Sbjct: 424 QWAGHIARRADGRWGRKVLEWRPRAGRRSVGRPPTRWTDDLVKVAGSTWM 473



 Score = 44.4 bits (100), Expect = 0.003
 Identities = 15/32 (46%), Positives = 25/32 (78%)
 Frame = -3

Query: 412 RVAGRNWMREAENPAQWRTIGEAYVYQWTAIG 317
           +VAG  WM+ A++ + W+++GEA+V QWT+ G
Sbjct: 466 KVAGSTWMQAAQDRSLWKSLGEAFVQQWTSFG 497


>UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein
           F28E10.3 [imported] - Caenorhabditis elegans; n=4;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           protein F28E10.3 [imported] - Caenorhabditis elegans -
           Strongylocentrotus purpuratus
          Length = 824

 Score = 49.6 bits (113), Expect = 8e-05
 Identities = 20/44 (45%), Positives = 23/44 (52%)
 Frame = -1

Query: 537 WAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSDDGGAGW 406
           WAG  SR  DNRW   +  W P  GKR+ GR   RW D+    W
Sbjct: 364 WAGHISRRNDNRWSSAITHWTPYEGKRNRGRQRKRWRDELQQFW 407


>UniRef50_Q10126 Cluster: Uncharacterized protein F52C9.6; n=7;
           Caenorhabditis elegans|Rep: Uncharacterized protein
           F52C9.6 - Caenorhabditis elegans
          Length = 279

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = -1

Query: 537 WAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
           WAG  +R  D RW   + EWRP   KR  GR   RW+D
Sbjct: 202 WAGHVARRKDGRWTTLMTEWRPWNWKRYVGRTPMRWTD 239


>UniRef50_P07254 Cluster: Chitinase A precursor; n=36; root|Rep:
           Chitinase A precursor - Serratia marcescens
          Length = 563

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = +1

Query: 10  ADNGDILNAMNMGLGNSA 63
           ADNGDILN+MN  LGNSA
Sbjct: 543 ADNGDILNSMNASLGNSA 560


>UniRef50_Q9RQJ3 Cluster: Chitinase; n=3; root|Rep: Chitinase -
           Aeromonas hydrophila
          Length = 862

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +1

Query: 10  ADNGDILNAMNMGLGN 57
           ADNGDILNAM+ GLGN
Sbjct: 539 ADNGDILNAMHEGLGN 554


>UniRef50_A4A8U3 Cluster: Putative uncharacterized protein; n=1;
           Congregibacter litoralis KT71|Rep: Putative
           uncharacterized protein - Congregibacter litoralis KT71
          Length = 131

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -1

Query: 552 YTLNQWAGRFSRTTDNRWVKRVLEWRPRI 466
           + LN +A R +  TD RWV+RVL W  R+
Sbjct: 70  FGLNMFA-RIAVVTDKRWVQRVLSWEDRV 97


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,823,362
Number of Sequences: 1657284
Number of extensions: 9189098
Number of successful extensions: 19474
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19467
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)