Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0775
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.46 
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    24   1.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   7.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 148 FFFLYLHDLFSERFVIVIMIKIVFLC 225
           ++F Y+H LF   F+I  M  +  LC
Sbjct: 259 YYFYYMHLLFCCAFIIFTMHLLFLLC 284



 Score = 25.0 bits (52), Expect = 0.61
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +2

Query: 116 FVIFIISQSKRFFFYIYMIYLVNVL*L*L*LKLYFFV 226
           +  FII     +F+Y ++I+ V++L L   L +Y+FV
Sbjct: 104 YYAFIILLCVYYFYYAFIIFTVHLLFL---LCIYYFV 137


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 417 PHHHSTEPKGVPHCVFQFA 473
           PHH +  P+  P C  +FA
Sbjct: 350 PHHQNFGPRHPPDCSMEFA 368


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 110 KNFVIFIISQSKRFFFYIYMIYLVNVL 190
           K  +  I+   KRF  YIY I  +++L
Sbjct: 104 KERLYLILRPGKRFDEYIYGIIFLSIL 130


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 110 KNFVIFIISQSKRFFFYIYMIYLVNVL 190
           K  +  I+   KRF  YIY I  +++L
Sbjct: 104 KERLYLILRPGKRFDEYIYGIIFLSIL 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,821
Number of Sequences: 336
Number of extensions: 2394
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)