Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0775
(717 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49557| Best HMM Match : RVT_1 (HMM E-Value=0.58) 31 1.2
SB_26530| Best HMM Match : RVT_1 (HMM E-Value=0.58) 31 1.2
SB_23124| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 1.2
SB_23084| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 1.2
SB_16102| Best HMM Match : RVT_1 (HMM E-Value=0.00065) 31 1.2
SB_2120| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 1.2
SB_1327| Best HMM Match : AT_hook (HMM E-Value=3.3) 31 1.2
SB_46852| Best HMM Match : AT_hook (HMM E-Value=2.6) 30 2.2
SB_45857| Best HMM Match : DUF1274 (HMM E-Value=2.4) 30 2.2
SB_43890| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_32772| Best HMM Match : AT_hook (HMM E-Value=2.6) 30 2.2
SB_59259| Best HMM Match : AT_hook (HMM E-Value=2.6) 30 2.2
SB_36149| Best HMM Match : AT_hook (HMM E-Value=2.6) 30 2.2
SB_11315| Best HMM Match : AT_hook (HMM E-Value=2.6) 30 2.2
SB_33808| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 29 2.8
SB_21608| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_55887| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_40565| Best HMM Match : DUF1274 (HMM E-Value=6.2) 29 3.8
SB_21106| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_54945| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 6.6
SB_52811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_48946| Best HMM Match : RVT_1 (HMM E-Value=1.49939e-43) 28 6.6
SB_47293| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4e-06) 28 6.6
SB_38360| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 6.6
SB_37313| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 6.6
SB_36139| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_32387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_21043| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_16201| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 6.6
SB_13125| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 6.6
SB_8476| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 6.6
SB_1360| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.6
SB_58038| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 6.6
SB_46411| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 6.6
SB_45064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_43639| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 6.6
SB_41617| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.6
SB_30735| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 6.6
SB_25567| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.6
SB_24790| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 6.6
SB_22656| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 6.6
SB_12973| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 6.6
SB_11676| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 6.6
SB_10586| Best HMM Match : RVT_1 (HMM E-Value=0.039) 28 6.6
SB_9839| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 6.6
SB_8297| Best HMM Match : RVT_1 (HMM E-Value=0.46) 28 6.6
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_33901| Best HMM Match : RVT_1 (HMM E-Value=5.5e-30) 28 8.7
SB_4403| Best HMM Match : AT_hook (HMM E-Value=3.3) 28 8.7
>SB_49557| Best HMM Match : RVT_1 (HMM E-Value=0.58)
Length = 404
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G F R D+R K++L G R GRP R+ D
Sbjct: 308 RWLGHFCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 346
>SB_26530| Best HMM Match : RVT_1 (HMM E-Value=0.58)
Length = 359
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G F R D+R K++L G R GRP R+ D
Sbjct: 308 RWLGHFCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 346
>SB_23124| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 203
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G F R D+R K++L G R GRP R+ D
Sbjct: 107 RWLGHFCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 145
>SB_23084| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 249
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G F R D+R K++L G R GRP R+ D
Sbjct: 153 RWLGHFCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 191
>SB_16102| Best HMM Match : RVT_1 (HMM E-Value=0.00065)
Length = 435
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G F R D+R K++L G R GRP R+ D
Sbjct: 339 RWLGHFCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 377
>SB_2120| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 235
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G F R D+R K++L G R GRP R+ D
Sbjct: 185 RWLGHFCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 223
>SB_1327| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 203
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G F R D+R K++L G R GRP R+ D
Sbjct: 107 RWLGHFCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 145
>SB_46852| Best HMM Match : AT_hook (HMM E-Value=2.6)
Length = 294
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R AGRP R+ D
Sbjct: 198 RWLGHLCRMDDDRVPKQLLFSELEHGSRPAGRPKLRFKD 236
>SB_45857| Best HMM Match : DUF1274 (HMM E-Value=2.4)
Length = 288
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R AGRP R+ D
Sbjct: 198 RWLGHLCRMDDDRVPKQLLFSELEHGSRPAGRPKLRFKD 236
>SB_43890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R AGRP R+ D
Sbjct: 107 RWLGHLCRMDDDRVPKQLLFSELEHGSRPAGRPKLRFKD 145
>SB_32772| Best HMM Match : AT_hook (HMM E-Value=2.6)
Length = 255
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R AGRP R+ D
Sbjct: 159 RWLGHLCRMDDDRVPKQLLFSELEHGSRPAGRPKLRFKD 197
>SB_59259| Best HMM Match : AT_hook (HMM E-Value=2.6)
Length = 203
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R AGRP R+ D
Sbjct: 107 RWLGHLCRMDDDRVPKQLLFSELEHGSRPAGRPKLRFKD 145
>SB_36149| Best HMM Match : AT_hook (HMM E-Value=2.6)
Length = 294
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R AGRP R+ D
Sbjct: 198 RWLGHLCRMDDDRVPKQLLFSELEHGSRPAGRPKLRFKD 236
>SB_11315| Best HMM Match : AT_hook (HMM E-Value=2.6)
Length = 294
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R AGRP R+ D
Sbjct: 198 RWLGHLCRMDDDRVPKQLLFSELEHGSRPAGRPKLRFKD 236
>SB_33808| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 280
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARW 430
+W G R R K W P IGKR GRP W
Sbjct: 201 KWLGHVLRMGQERIPKTSALWTP-IGKRKPGRPKTTW 236
>SB_21608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARW 430
+W G R R K W P IGKR GRP W
Sbjct: 48 KWLGHVLRMGQERIPKTSALWTP-IGKRKPGRPKTTW 83
>SB_55887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R+ GRP R+ D
Sbjct: 198 RWLGHLCRMDDDRVPKQLLFSELEQGSRAVGRPKLRFKD 236
>SB_40565| Best HMM Match : DUF1274 (HMM E-Value=6.2)
Length = 294
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R+ GRP R+ D
Sbjct: 198 RWLGHLCRMDDDRVPKQLLFSELEQGSRAVGRPKLRFKD 236
>SB_21106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 107 RWLGHLCRVDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 145
>SB_54945| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 392
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 310 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 348
>SB_52811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 58 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 96
>SB_48946| Best HMM Match : RVT_1 (HMM E-Value=1.49939e-43)
Length = 1074
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 978 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 1016
>SB_47293| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4e-06)
Length = 744
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 648 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 686
>SB_38360| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 387
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 291 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 329
>SB_37313| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 203
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 107 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 145
>SB_36139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 339 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 377
>SB_32387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 818 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPRLRFKD 856
>SB_21043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 146 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 184
>SB_16201| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 154
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 58 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 96
>SB_13125| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 154
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 58 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 96
>SB_8476| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 202
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 153 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 191
>SB_1360| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 591
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 457 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 495
>SB_58038| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 201
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 105 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 143
>SB_46411| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 146
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 50 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 88
>SB_45064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 97 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 135
>SB_43639| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 249
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 153 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 191
>SB_41617| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 675
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 579 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 617
>SB_30735| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 249
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 153 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 191
>SB_25567| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 636
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 540 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 578
>SB_24790| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 226
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 130 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 168
>SB_22656| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 249
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 153 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 191
>SB_12973| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 203
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 153 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 191
>SB_11676| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 146
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 50 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 88
>SB_10586| Best HMM Match : RVT_1 (HMM E-Value=0.039)
Length = 590
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 494 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 532
>SB_9839| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 127
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 31 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 69
>SB_8297| Best HMM Match : RVT_1 (HMM E-Value=0.46)
Length = 404
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 308 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 346
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 159 RWLGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 197
>SB_33901| Best HMM Match : RVT_1 (HMM E-Value=5.5e-30)
Length = 841
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D+R K++L G R GRP R+ D
Sbjct: 745 RWFGHLCRMDDDRVPKQLLFSELEHGSRPVGRPKLRFKD 783
>SB_4403| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 280
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 540 QWAGRFSRTTDNRWVKRVLEWRPRIGKRSAGRP*ARWSD 424
+W G R D R K++L G R GRP R+ D
Sbjct: 198 RWLGHLCRMDDGRVPKQLLFSELEHGSRPVGRPKLRFKD 236
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,103,514
Number of Sequences: 59808
Number of extensions: 291664
Number of successful extensions: 688
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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