Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0774
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L19197-1|AAA28504.1|  312|Drosophila melanogaster eIF-2 beta-sub...   201   7e-52
AY071253-1|AAL48875.1|  312|Drosophila melanogaster RE29270p pro...   201   7e-52
AE014296-2158|AAF49902.1|  312|Drosophila melanogaster CG4153-PA...   201   7e-52
AY119613-1|AAM50267.1| 1000|Drosophila melanogaster LD42233p pro...    31   2.2  
AE014297-3016|AAF55899.2| 1000|Drosophila melanogaster CG7956-PA...    31   2.2  
AE014297-3015|AAX52970.2| 1122|Drosophila melanogaster CG7956-PB...    31   2.2  
AE014297-3014|ABI31191.1| 1192|Drosophila melanogaster CG7956-PC...    31   2.2  

>L19197-1|AAA28504.1|  312|Drosophila melanogaster eIF-2
           beta-subunit protein.
          Length = 312

 Score =  201 bits (491), Expect = 7e-52
 Identities = 92/127 (72%), Positives = 107/127 (84%)
 Frame = +1

Query: 355 EDVRGEDQENVEDEHGEWVGSDHDYSYDELLERVFDIMREKNPSMVSGKKQKFIMRPPQV 534
           +D + ED+EN ED    W GSD DY+YDELL+RVF+I+ +KNP M +G+K KF+MRPPQV
Sbjct: 129 DDDKSEDKENDEDNSSTWFGSDRDYTYDELLKRVFEIILDKNPDMAAGRKPKFVMRPPQV 188

Query: 535 VRIGTKKTSFANFTEICKTLHRQAKHLLDFLLAELGTSGSVDGNSQLIIKGRXQQKQIEN 714
           +R+GTKKTSFANF +I KTLHR  KHLLDFLLAELGTSGS+DGN QLIIKGR Q KQIEN
Sbjct: 189 LRVGTKKTSFANFMDIAKTLHRLPKHLLDFLLAELGTSGSMDGNQQLIIKGRFQPKQIEN 248

Query: 715 VLRRYIK 735
           VLRRYIK
Sbjct: 249 VLRRYIK 255


>AY071253-1|AAL48875.1|  312|Drosophila melanogaster RE29270p
           protein.
          Length = 312

 Score =  201 bits (491), Expect = 7e-52
 Identities = 92/127 (72%), Positives = 107/127 (84%)
 Frame = +1

Query: 355 EDVRGEDQENVEDEHGEWVGSDHDYSYDELLERVFDIMREKNPSMVSGKKQKFIMRPPQV 534
           +D + ED+EN ED    W GSD DY+YDELL+RVF+I+ +KNP M +G+K KF+MRPPQV
Sbjct: 129 DDDKSEDKENDEDNSSTWFGSDRDYTYDELLKRVFEIILDKNPDMAAGRKPKFVMRPPQV 188

Query: 535 VRIGTKKTSFANFTEICKTLHRQAKHLLDFLLAELGTSGSVDGNSQLIIKGRXQQKQIEN 714
           +R+GTKKTSFANF +I KTLHR  KHLLDFLLAELGTSGS+DGN QLIIKGR Q KQIEN
Sbjct: 189 LRVGTKKTSFANFMDIAKTLHRLPKHLLDFLLAELGTSGSMDGNQQLIIKGRFQPKQIEN 248

Query: 715 VLRRYIK 735
           VLRRYIK
Sbjct: 249 VLRRYIK 255


>AE014296-2158|AAF49902.1|  312|Drosophila melanogaster CG4153-PA
           protein.
          Length = 312

 Score =  201 bits (491), Expect = 7e-52
 Identities = 92/127 (72%), Positives = 107/127 (84%)
 Frame = +1

Query: 355 EDVRGEDQENVEDEHGEWVGSDHDYSYDELLERVFDIMREKNPSMVSGKKQKFIMRPPQV 534
           +D + ED+EN ED    W GSD DY+YDELL+RVF+I+ +KNP M +G+K KF+MRPPQV
Sbjct: 129 DDDKSEDKENDEDNSSTWFGSDRDYTYDELLKRVFEIILDKNPDMAAGRKPKFVMRPPQV 188

Query: 535 VRIGTKKTSFANFTEICKTLHRQAKHLLDFLLAELGTSGSVDGNSQLIIKGRXQQKQIEN 714
           +R+GTKKTSFANF +I KTLHR  KHLLDFLLAELGTSGS+DGN QLIIKGR Q KQIEN
Sbjct: 189 LRVGTKKTSFANFMDIAKTLHRLPKHLLDFLLAELGTSGSMDGNQQLIIKGRFQPKQIEN 248

Query: 715 VLRRYIK 735
           VLRRYIK
Sbjct: 249 VLRRYIK 255


>AY119613-1|AAM50267.1| 1000|Drosophila melanogaster LD42233p
           protein.
          Length = 1000

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 344 WSQKKMSEEKIKKMWKMSTVNGLEVIMITH 433
           W  ++ SE  IK  W +S+V+ +E I +TH
Sbjct: 20  WWHRRTSEFSIKAGWDLSSVDDIECIGVTH 49


>AE014297-3016|AAF55899.2| 1000|Drosophila melanogaster CG7956-PA,
           isoform A protein.
          Length = 1000

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 344 WSQKKMSEEKIKKMWKMSTVNGLEVIMITH 433
           W  ++ SE  IK  W +S+V+ +E I +TH
Sbjct: 20  WWHRRTSEFSIKAGWDLSSVDDIECIGVTH 49


>AE014297-3015|AAX52970.2| 1122|Drosophila melanogaster CG7956-PB,
           isoform B protein.
          Length = 1122

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 344 WSQKKMSEEKIKKMWKMSTVNGLEVIMITH 433
           W  ++ SE  IK  W +S+V+ +E I +TH
Sbjct: 20  WWHRRTSEFSIKAGWDLSSVDDIECIGVTH 49


>AE014297-3014|ABI31191.1| 1192|Drosophila melanogaster CG7956-PC,
           isoform C protein.
          Length = 1192

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 344 WSQKKMSEEKIKKMWKMSTVNGLEVIMITH 433
           W  ++ SE  IK  W +S+V+ +E I +TH
Sbjct: 20  WWHRRTSEFSIKAGWDLSSVDDIECIGVTH 49


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,355,732
Number of Sequences: 53049
Number of extensions: 464432
Number of successful extensions: 1624
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1620
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)