Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0773
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.8  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   5.5  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   7.3  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   7.3  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   9.7  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -1

Query: 292 LIILSTTSFTRYLPSPPTTRVDPIKEVLF 206
           ++  +   ++ Y   PP  ++DP KE L+
Sbjct: 313 VVCFNAKPWSNYCVEPPCGQLDPTKEKLY 341


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 150 KVFIQENYTENFIQCILDVNKTSLIGSTL 236
           ++   +  T+N++ CIL+  K +  G  L
Sbjct: 31  EILKNDRLTKNYLDCILEKGKCTPEGEEL 59


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 150 KVFIQENYTENFIQCILDVNKTSLIGSTL 236
           ++   +   +N++ C+LD  K S  G  L
Sbjct: 33  QILKSDRLLKNYVNCLLDRGKCSPDGQEL 61


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 150 KVFIQENYTENFIQCILDVNKTSLIGSTL 236
           ++   +   +N++ C+LD  K S  G  L
Sbjct: 33  QILKSDRLLKNYVNCLLDRGKCSPDGQEL 61


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 150 KVFIQENYTENFIQCILDVNKTSLIGSTL 236
           ++   +  T N+I CIL   K +  G  L
Sbjct: 32  EILKNDRLTRNYIDCILGKGKCTPEGEEL 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,880
Number of Sequences: 336
Number of extensions: 3705
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)