Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0772
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12318| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 5e-12
SB_14472| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 5e-12
SB_58027| Best HMM Match : zf-C4 (HMM E-Value=0) 68 8e-12
SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0) 66 3e-11
SB_18088| Best HMM Match : zf-C4 (HMM E-Value=7.56701e-44) 66 3e-11
SB_30131| Best HMM Match : zf-C4 (HMM E-Value=8.39938e-42) 64 8e-11
SB_12110| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_58064| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_9970| Best HMM Match : zf-C4 (HMM E-Value=9.4e-38) 63 2e-10
SB_20447| Best HMM Match : zf-C4 (HMM E-Value=2.09999e-41) 62 4e-10
SB_51757| Best HMM Match : Hormone_recep (HMM E-Value=6.4e-37) 59 4e-09
SB_36879| Best HMM Match : Hormone_recep (HMM E-Value=0) 58 5e-09
SB_56305| Best HMM Match : zf-C4 (HMM E-Value=0) 57 2e-08
SB_4250| Best HMM Match : zf-C4 (HMM E-Value=2.3e-39) 57 2e-08
SB_10105| Best HMM Match : zf-C4 (HMM E-Value=3.60001e-40) 54 8e-08
SB_33135| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_32228| Best HMM Match : zf-C4 (HMM E-Value=6.2e-23) 41 0.001
SB_26764| Best HMM Match : ANF_receptor (HMM E-Value=0.001) 29 4.8
SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_12318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +3
Query: 441 IIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMPV-L 617
++ C+VCGD+SSG HYGV TC+GC+GFF+RS + Y C CVV + P +
Sbjct: 20 LVLCRVCGDRSSGKHYGVFTCDGCRGFFKRSIRRNLTYHCKELGKCVVDVARRNQCPASV 79
Query: 618 QTTEVPQT 641
Q P++
Sbjct: 80 QHERAPRS 87
>SB_14472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 68.5 bits (160), Expect = 5e-12
Identities = 27/49 (55%), Positives = 33/49 (67%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
+ C VCGDKSSG HYGV TCEGCK FF+RS + Y C ++ C + Q
Sbjct: 241 VECAVCGDKSSGKHYGVFTCEGCKSFFKRSVRRNLTYTCRASRDCPIDQ 289
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQ 690
T + A+R D+ +RN+CQYCRL+KCLK+GM R+AV+ GR+ Q
Sbjct: 276 TYTCRASRDCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRIPAAQ 322
>SB_58027| Best HMM Match : zf-C4 (HMM E-Value=0)
Length = 396
Score = 67.7 bits (158), Expect = 8e-12
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = +3
Query: 438 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
E + C VCGDKS+G HYGV TCEGCK FF+R+ NY C C + + P
Sbjct: 53 ERVACAVCGDKSTGKHYGVSTCEGCKSFFKRTVRNNTNYTCRGQNTCAIDRNSRSRCP 110
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
DR +R+RC CR QKCL GM ++AV+
Sbjct: 102 DRNSRSRCPSCRFQKCLSTGMKKEAVQ 128
>SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0)
Length = 438
Score = 66.1 bits (154), Expect = 3e-11
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
I C VCGDKSSG HYGV TCEGCK FF+RS ++Y C + C V
Sbjct: 77 IDCAVCGDKSSGKHYGVYTCEGCKSFFKRSIRRSLSYSCRGVRNCPV 123
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D NRN+CQYCRL+KCLK+GM ++AV+ GR+
Sbjct: 124 DIQNRNQCQYCRLKKCLKVGMRKEAVQKGRI 154
>SB_18088| Best HMM Match : zf-C4 (HMM E-Value=7.56701e-44)
Length = 1220
Score = 66.1 bits (154), Expect = 3e-11
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
C VC DK++G HYGV TCEGCKGFF+R+ + Y C N+ C + Q
Sbjct: 823 CVVCNDKATGYHYGVFTCEGCKGFFKRTVQKQLEYTCRGNQDCDINQ 869
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 598 RNRCQYCRLQKCLKLGMSRDAVKF 669
RNRCQYCR +KC+K GM + + F
Sbjct: 872 RNRCQYCRFEKCVKSGMLKQGMSF 895
>SB_30131| Best HMM Match : zf-C4 (HMM E-Value=8.39938e-42)
Length = 311
Score = 64.5 bits (150), Expect = 8e-11
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = +3
Query: 408 KAANSIRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
K A + + EI+ CKVCGD SSG HYGV TC+GC GFF RS + Y C N C V
Sbjct: 22 KRAPEMDKKQEIL-CKVCGDISSGRHYGVYTCDGCSGFFMRSVRRDMVYTCKGNGGCTV 79
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
D+ RN+CQ CR +KCL++ M+R AV+ R R
Sbjct: 80 DKKRRNQCQACRFKKCLEVKMNRFAVQQERQPNSTR 115
>SB_12110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 64.5 bits (150), Expect = 8e-11
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+SSG HYGV +CEGCK FF+R+ + Y C +K+C +
Sbjct: 14 CAICGDRSSGFHYGVQSCEGCKSFFKRTVQKQLQYACVESKSCQI 58
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGR 675
D+ NR RCQYCR QKCL LGM ++AV+ R
Sbjct: 59 DKNNRIRCQYCRFQKCLALGMLKEAVREDR 88
>SB_58064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1027
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VC D++SG HYGV+TCEGCKGFF+RS + Y C + C+V
Sbjct: 737 CLVCNDRASGRHYGVMTCEGCKGFFKRSVRRNMVYHCMFRETCIV 781
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGR 675
D+V RNRCQ CR+ KCL +GM + AV++ R
Sbjct: 782 DKVLRNRCQKCRMDKCLAVGMQKSAVQYER 811
>SB_9970| Best HMM Match : zf-C4 (HMM E-Value=9.4e-38)
Length = 259
Score = 63.3 bits (147), Expect = 2e-10
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQC 560
IPCKVCGD+SSG HYG+ C+GC GFF+RS +Y C
Sbjct: 6 IPCKVCGDRSSGKHYGIYACDGCSGFFKRSIRRNRSYTC 44
Score = 35.9 bits (79), Expect = 0.032
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRD 657
D+++RN+C+ CRL+KC + M++D
Sbjct: 56 DKIHRNQCRSCRLKKCFDVSMNKD 79
>SB_20447| Best HMM Match : zf-C4 (HMM E-Value=2.09999e-41)
Length = 419
Score = 62.1 bits (144), Expect = 4e-10
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
CKVCGD +G HYGV+ CEGCKGFF+R+ + Y C + C +
Sbjct: 42 CKVCGDNGTGKHYGVVACEGCKGFFKRTVRKNLIYTCRGSNDCFI 86
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRD 657
D+V+RNRCQ CR KCL GM ++
Sbjct: 87 DKVHRNRCQKCRFVKCLTAGMKKE 110
>SB_51757| Best HMM Match : Hormone_recep (HMM E-Value=6.4e-37)
Length = 405
Score = 58.8 bits (136), Expect = 4e-09
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD+S+G HYGV C+GC GFF+R+ + + C AC V
Sbjct: 24 CVVCGDQSTGKHYGVFACDGCSGFFKRTSRRLEPWVCKAQNACSV 68
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 565 ATRPASWDRVNRNRCQYCRLQKCLKLGMSRD 657
A S +RN C+ CR++KC+++GM D
Sbjct: 62 AQNACSVKTTSRNECKACRMKKCVEVGMKFD 92
>SB_36879| Best HMM Match : Hormone_recep (HMM E-Value=0)
Length = 358
Score = 58.4 bits (135), Expect = 5e-09
Identities = 24/42 (57%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRS--QSTVVNYQCPRN 569
C VCGD+SSG HYG TCEGCK FF+R+ + V Y C R+
Sbjct: 7 CAVCGDESSGYHYGAYTCEGCKSFFKRTVQRGLVKKYSCVRS 48
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ +R +CQ CRLQ+C GM + V+
Sbjct: 56 DKNSRAKCQACRLQRCFDAGMVLNGVR 82
>SB_56305| Best HMM Match : zf-C4 (HMM E-Value=0)
Length = 553
Score = 56.8 bits (131), Expect = 2e-08
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQC 560
C +C DK++G HYGV +CEGCKGFF+RS +Y C
Sbjct: 198 CAICLDKATGQHYGVTSCEGCKGFFKRSVQNKKDYTC 234
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +1
Query: 568 TRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGR 675
T+ D+ +RNRCQYCR QKC++ GM ++AV+ R
Sbjct: 238 TKDCPIDKRHRNRCQYCRFQKCIQAGMIKEAVREDR 273
>SB_4250| Best HMM Match : zf-C4 (HMM E-Value=2.3e-39)
Length = 79
Score = 56.8 bits (131), Expect = 2e-08
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
C +C D+++G HYG +C+GCKGFFRRS Y C + CV+ +
Sbjct: 10 CLICADRATGKHYGASSCDGCKGFFRRSVRKNHVYSCRFQRNCVINK 56
Score = 33.9 bits (74), Expect = 0.13
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +1
Query: 598 RNRCQYCRLQKCLKLGMSRD 657
RN+C++CRL+KC + GM ++
Sbjct: 59 RNQCRFCRLRKCFRAGMKKE 78
>SB_10105| Best HMM Match : zf-C4 (HMM E-Value=3.60001e-40)
Length = 370
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
I C VC SSG HYGV TCEGCK FF R+ + Y C + +C V
Sbjct: 20 IECAVCSAPSSGRHYGVFTCEGCKCFFNRTVRYKLTYICEGSGSCRV 66
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
D+ NR +CQ CR +KC +GM R+A++ GR +K
Sbjct: 67 DKQNRTQCQACRFKKCATVGMRREAIRRGRPTK 99
>SB_33135| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 598 RNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
RN CQ+CR++KCL +GM R+AV+ R ++
Sbjct: 73 RNSCQFCRMRKCLAVGMKREAVQQARAQDFEK 104
>SB_32228| Best HMM Match : zf-C4 (HMM E-Value=6.2e-23)
Length = 300
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGR 675
D RN+CQ CRL+KC ++ M+RDAV+ R
Sbjct: 31 DVARRNQCQACRLRKCFEMNMNRDAVQHER 60
Score = 37.5 bits (83), Expect = 0.010
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 495 ITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+TC+GC+GFF+RS + YQC C +
Sbjct: 1 MTCDGCRGFFKRSVRRNLAYQCKEKNDCPI 30
>SB_26764| Best HMM Match : ANF_receptor (HMM E-Value=0.001)
Length = 342
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 507 GCKGFFRRSQSTVVNYQCPRNKACVV 584
GC G R S V+ Y CP N + +V
Sbjct: 312 GCYGNIRSSSHQVMRYDCPLNSSSIV 337
>SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 819
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMPV 614
C CG G+ + C+GC G F + + + C +K + G P V
Sbjct: 114 CDFCGQMLYGLVRQGLKCDGCGGNFHKRCAYRIRNNCSDSKHRISGHFNTLPRNV 168
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,478,516
Number of Sequences: 59808
Number of extensions: 481097
Number of successful extensions: 1536
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1536
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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