Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0772
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC100990-1|AAI00991.1| 468|Homo sapiens RAR-related orphan rece... 102 1e-21
BC100989-1|AAI00990.1| 468|Homo sapiens RAR-related orphan rece... 102 1e-21
BC100988-1|AAI00989.1| 468|Homo sapiens RAR-related orphan rece... 102 1e-21
BC100987-1|AAI00988.1| 468|Homo sapiens RAR-related orphan rece... 102 1e-21
L14611-1|AAA02963.1| 468|Homo sapiens transcription factor prot... 101 2e-21
Y08639-1|CAA69929.1| 459|Homo sapiens nuclear orphan receptor R... 101 2e-21
U04899-1|AAA62660.1| 548|Homo sapiens RORalpha3 protein. 101 2e-21
BC093774-1|AAH93774.1| 459|Homo sapiens RAR-related orphan rece... 101 2e-21
BC093772-1|AAH93772.1| 459|Homo sapiens RAR-related orphan rece... 101 2e-21
BC051830-1|AAH51830.1| 459|Homo sapiens RAR-related orphan rece... 101 2e-21
AL355674-1|CAD13280.2| 459|Homo sapiens RAR-related orphan rece... 101 2e-21
AL137018-1|CAD13276.2| 459|Homo sapiens RAR-related orphan rece... 101 2e-21
U04898-1|AAA62659.1| 556|Homo sapiens RORalpha2 protein. 101 3e-21
U04897-1|AAA62658.1| 523|Homo sapiens RORalpha1 protein. 100 1e-20
BC008831-1|AAH08831.1| 523|Homo sapiens RAR-related orphan rece... 100 1e-20
AL589765-17|CAI17179.1| 497|Homo sapiens RAR-related orphan rec... 93 9e-19
U16997-1|AAA64751.1| 560|Homo sapiens ROR gamma protein. 91 3e-18
CR457436-1|CAG33717.1| 518|Homo sapiens RORC protein. 91 3e-18
BC110571-1|AAI10572.1| 518|Homo sapiens RAR-related orphan rece... 91 3e-18
BC031554-1|AAH31554.1| 518|Homo sapiens RAR-related orphan rece... 91 3e-18
AL589765-18|CAI17180.1| 518|Homo sapiens RAR-related orphan rec... 91 3e-18
AK223137-1|BAD96857.1| 518|Homo sapiens RAR-related orphan rece... 91 3e-18
AJ250835-1|CAB60726.1| 381|Homo sapiens retinoic acid receptor ... 73 1e-12
M57707-1|AAA63254.1| 454|Homo sapiens retinoic acid receptor-ga... 72 2e-12
M38258-1|AAA60254.1| 454|Homo sapiens retinoic acid receptor-ga... 72 2e-12
M24857-1|AAA52692.1| 454|Homo sapiens RARG protein. 72 2e-12
BC093729-1|AAH93729.1| 454|Homo sapiens retinoic acid receptor,... 72 2e-12
BC093727-1|AAH93727.1| 454|Homo sapiens retinoic acid receptor,... 72 2e-12
Y00291-1|CAA68398.1| 448|Homo sapiens protein ( Human hap mRNA ... 71 3e-12
X07282-1|CAA30262.1| 448|Homo sapiens protein ( Human mRNA for ... 71 3e-12
DQ083391-1|AAZ32403.1| 184|Homo sapiens retinoic acid receptor ... 71 3e-12
BC060794-1|AAH60794.1| 448|Homo sapiens retinoic acid receptor,... 71 3e-12
X06614-1|CAA29829.1| 462|Homo sapiens protein ( Human mRNA for ... 71 4e-12
X06538-1|CAA29787.1| 432|Homo sapiens protein ( Human mRNA for ... 71 4e-12
U41743-1|AAB00113.1| 520|Homo sapiens nucleophosmin-retinoic ac... 71 4e-12
U41742-1|AAB00112.1| 563|Homo sapiens nucleophosmin-retinoic ac... 71 4e-12
S50916-1|AAB19602.2| 416|Homo sapiens retinoic acid receptor al... 71 4e-12
M73779-1|AAA60126.1| 797|Homo sapiens PML-RAR protein protein. 71 4e-12
CR457438-1|CAG33719.1| 462|Homo sapiens RARA protein. 71 4e-12
BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,... 71 4e-12
BC008727-1|AAH08727.1| 462|Homo sapiens retinoic acid receptor,... 71 4e-12
AF088895-1|AAD05222.1| 462|Homo sapiens retinoic acid receptor ... 71 4e-12
AF012304-1|AAC33511.1| 194|Homo sapiens nuclear mitotic apparat... 71 4e-12
X99975-1|CAA68236.1| 480|Homo sapiens hRTR/hGCNF protein protein. 71 5e-12
U80802-1|AAB96828.1| 480|Homo sapiens orphan nuclear receptor G... 71 5e-12
S83309-1|AAB50876.1| 476|Homo sapiens germ cell nuclear factor ... 71 5e-12
BC030600-1|AAH30600.1| 475|Homo sapiens nuclear receptor subfam... 71 5e-12
AL354979-4|CAI10960.1| 479|Homo sapiens nuclear receptor subfam... 71 5e-12
AL354928-2|CAI39633.1| 479|Homo sapiens nuclear receptor subfam... 71 5e-12
AL158075-1|CAI13577.1| 479|Homo sapiens nuclear receptor subfam... 71 5e-12
AF004291-1|AAC52054.1| 454|Homo sapiens germ cell nuclear facto... 71 5e-12
U64876-1|AAB06335.1| 480|Homo sapiens nuclear orphan receptor p... 70 7e-12
BC084544-1|AAH84544.2| 404|Homo sapiens nuclear receptor subfam... 70 7e-12
BC063018-1|AAH63018.2| 404|Homo sapiens nuclear receptor subfam... 70 7e-12
BC002669-1|AAH02669.3| 404|Homo sapiens nuclear receptor subfam... 70 7e-12
X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein pro... 69 1e-11
X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor ... 69 2e-11
X52773-1|CAA36982.1| 462|Homo sapiens protein ( Human mRNA for ... 69 2e-11
X12794-1|CAA31282.1| 403|Homo sapiens protein ( Human v-erbA re... 69 2e-11
U60477-1|AAB09475.1| 414|Homo sapiens apoliprotein AI regulator... 69 2e-11
U10990-1|AAC50118.1| 596|Homo sapiens hTAK1 protein. 69 2e-11
M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta ... 69 2e-11
M64497-1|AAA86429.1| 414|Homo sapiens apolipoprotein AI regulat... 69 2e-11
M62760-1|AAA21479.1| 351|Homo sapiens ovalbumin upstream promot... 69 2e-11
DQ303444-1|ABB96254.1| 452|Homo sapiens retinoid X receptor, al... 69 2e-11
BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, be... 69 2e-11
BC110998-1|AAI10999.1| 462|Homo sapiens retinoid X receptor, al... 69 2e-11
BC063827-1|AAH63827.1| 516|Homo sapiens RXRA protein protein. 69 2e-11
BC051670-1|AAH51670.1| 530|Homo sapiens NR2C2 protein protein. 69 2e-11
BC042897-1|AAH42897.1| 414|Homo sapiens nuclear receptor subfam... 69 2e-11
BC014664-1|AAH14664.1| 414|Homo sapiens nuclear receptor subfam... 69 2e-11
BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, be... 69 2e-11
AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, be... 69 2e-11
AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, be... 69 2e-11
AL669970-1|CAM45733.1| 462|Homo sapiens retinoid X receptor, al... 69 2e-11
AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, b... 69 2e-11
AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, b... 69 2e-11
AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, be... 69 2e-11
AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, be... 69 2e-11
AL354796-1|CAH70571.1| 462|Homo sapiens retinoid X receptor, al... 69 2e-11
AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, b... 69 2e-11
AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, b... 69 2e-11
AL031228-12|CAI95621.1| 262|Homo sapiens retinoid X receptor, b... 69 2e-11
AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor bet... 69 2e-11
AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B p... 69 2e-11
AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, be... 69 2e-11
X16155-1|CAA34277.1| 418|Homo sapiens COUP-TF protein. 68 3e-11
X12795-1|CAA31283.1| 423|Homo sapiens protein ( Human v-erbA re... 68 3e-11
M29960-1|AAA36761.1| 603|Homo sapiens protein ( Human steroid r... 68 3e-11
M29959-1|AAA36762.1| 467|Homo sapiens protein ( Human steroid r... 68 3e-11
M21985-1|AAA36650.1| 483|Homo sapiens protein ( Human steroid r... 68 3e-11
BC040141-1|AAH40141.1| 467|Homo sapiens nuclear receptor subfam... 68 3e-11
BC017493-1|AAH17493.1| 423|Homo sapiens nuclear receptor subfam... 68 3e-11
BC004154-1|AAH04154.1| 423|Homo sapiens nuclear receptor subfam... 68 3e-11
U38480-1|AAA80681.1| 463|Homo sapiens retinoid X receptor-gamma... 67 5e-11
M24898-1|AAA52335.1| 614|Homo sapiens triiodothyronine receptor... 67 5e-11
CR456705-1|CAG32986.1| 463|Homo sapiens RXRG protein. 67 5e-11
BC056148-1|AAH56148.1| 614|Homo sapiens nuclear receptor subfam... 67 5e-11
BC047875-1|AAH47875.1| 614|Homo sapiens nuclear receptor subfam... 67 5e-11
BC012063-1|AAH12063.1| 463|Homo sapiens retinoid X receptor, ga... 67 5e-11
AL160058-2|CAC00596.1| 463|Homo sapiens retinoid X receptor, ga... 67 5e-11
L27586-1|AAA21474.1| 615|Homo sapiens TR4 orphan receptor protein. 67 7e-11
U76388-1|AAB53105.1| 461|Homo sapiens steroidogenic factor 1 pr... 66 9e-11
BC032501-1|AAH32501.1| 461|Homo sapiens nuclear receptor subfam... 66 9e-11
AY542548-1|AAS48621.1| 81|Homo sapiens nuclear receptor AdBP4 ... 66 9e-11
AL354979-3|CAI10959.1| 461|Homo sapiens nuclear receptor subfam... 66 9e-11
AL354979-2|CAI10958.1| 178|Homo sapiens nuclear receptor subfam... 66 9e-11
AL137846-2|CAI10872.1| 461|Homo sapiens nuclear receptor subfam... 66 9e-11
U93553-1|AAD03155.1| 500|Homo sapiens alpha1-fetoprotein transc... 66 1e-10
U80251-1|AAC78727.1| 495|Homo sapiens hepatocytic transcription... 66 1e-10
D88155-1|BAA13546.1| 461|Homo sapiens AdBP4 protein. 66 1e-10
BC118652-1|AAI18653.1| 495|Homo sapiens nuclear receptor subfam... 66 1e-10
BC118571-1|AAI18572.1| 495|Homo sapiens nuclear receptor subfam... 66 1e-10
AF190464-2|AAG17124.1| 495|Homo sapiens hepatocytic transcripti... 66 1e-10
AF190464-1|AAG17125.1| 541|Homo sapiens hepatocytic transcripti... 66 1e-10
AF146343-1|AAD37378.1| 495|Homo sapiens CYP7A promoter binding ... 66 1e-10
AF124247-1|AAD26565.1| 541|Homo sapiens hepatocytic transcripti... 66 1e-10
AF049102-1|AAD03248.1| 323|Homo sapiens alpha1-fetoprotein tran... 66 1e-10
AB019246-1|BAA34092.1| 541|Homo sapiens FTZ-F1 related protein ... 66 1e-10
L31785-1|AAA65937.1| 579|Homo sapiens orphan nuclear hormone re... 66 2e-10
D16815-1|BAA20088.1| 579|Homo sapiens EAR-1r protein. 66 2e-10
CR457434-1|CAG33715.1| 579|Homo sapiens NR1D2 protein. 66 2e-10
BC070035-1|AAH70035.1| 408|Homo sapiens NR1D2 protein protein. 66 2e-10
BC045613-1|AAH45613.1| 579|Homo sapiens nuclear receptor subfam... 66 2e-10
AB209091-1|BAD92328.1| 549|Homo sapiens Orphan nuclear receptor... 66 2e-10
EF614253-1|ABR09276.1| 473|Homo sapiens nuclear receptor subfam... 64 3e-10
DQ923326-1|ABJ52966.1| 397|Homo sapiens orphan nuclear receptor... 64 3e-10
DQ911122-1|ABJ52965.1| 434|Homo sapiens orphan nuclear receptor... 64 3e-10
BC017304-1|AAH17304.2| 433|Homo sapiens NR1I2 protein protein. 64 3e-10
AY091855-1|AAM26736.1| 434|Homo sapiens steroid and xenobiotic ... 64 3e-10
AJ009937-2|CAB55493.1| 420|Homo sapiens nuclear hormone recepto... 64 3e-10
AJ009937-1|CAB55492.1| 397|Homo sapiens nuclear hormone recepto... 64 3e-10
AJ009936-2|CAB55490.1| 457|Homo sapiens nuclear hormone recepto... 64 3e-10
AJ009936-1|CAB55489.1| 434|Homo sapiens nuclear hormone recepto... 64 3e-10
AF364606-3|AAK38721.1| 397|Homo sapiens orphan nuclear receptor... 64 3e-10
AF364606-2|AAK38720.1| 434|Homo sapiens orphan nuclear receptor... 64 3e-10
AF364606-1|AAK38722.1| 473|Homo sapiens orphan nuclear receptor... 64 3e-10
AF084645-1|AAC64558.1| 434|Homo sapiens orphan nuclear receptor... 64 3e-10
AF084644-1|AAC64557.1| 473|Homo sapiens orphan nuclear receptor... 64 3e-10
AF061056-1|AAD05436.1| 434|Homo sapiens orphan nuclear receptor... 64 3e-10
Z30425-1|CAA83016.1| 348|Homo sapiens orphan nuclear hormone re... 64 5e-10
U68233-1|AAB08107.1| 472|Homo sapiens farnesol receptor HRR-1 p... 64 5e-10
DQ022681-1|AAY56401.1| 357|Homo sapiens nuclear receptor subfam... 64 5e-10
BC130573-1|AAI30574.1| 476|Homo sapiens NR1H4 protein protein. 64 5e-10
BC121121-1|AAI21122.1| 309|Homo sapiens nuclear receptor subfam... 64 5e-10
BC121120-1|AAI21121.1| 314|Homo sapiens nuclear receptor subfam... 64 5e-10
BC071778-1|AAH71778.1| 475|Homo sapiens NR1H4 protein protein. 64 5e-10
BC069626-1|AAH69626.1| 352|Homo sapiens nuclear receptor subfam... 64 5e-10
AY572826-1|AAT47179.1| 119|Homo sapiens constitutive androstane... 64 5e-10
AY572823-1|AAT47176.1| 147|Homo sapiens constitutive androstane... 64 5e-10
AY572822-1|AAT47175.1| 147|Homo sapiens constitutive androstane... 64 5e-10
AY572819-1|AAT47172.1| 321|Homo sapiens constitutive androstane... 64 5e-10
AY572813-1|AAT47166.1| 278|Homo sapiens constitutive androstane... 64 5e-10
AY572810-1|AAT47163.1| 309|Homo sapiens constitutive androstane... 64 5e-10
AY572806-1|AAT47159.1| 322|Homo sapiens constitutive androstane... 64 5e-10
AL590714-14|CAH72154.1| 348|Homo sapiens nuclear receptor subfa... 64 5e-10
AL590714-13|CAH72153.1| 352|Homo sapiens nuclear receptor subfa... 64 5e-10
AF478446-1|AAM53551.1| 486|Homo sapiens farnesoid-X-receptor be... 64 5e-10
AF478445-1|AAM53550.1| 482|Homo sapiens farnesoid-X-receptor be... 64 5e-10
AF384555-1|AAK60271.1| 476|Homo sapiens farnesol receptor protein. 64 5e-10
Y13276-1|CAA73725.1| 385|Homo sapiens Tailless protein protein. 63 1e-09
BC028031-1|AAH28031.1| 385|Homo sapiens nuclear receptor subfam... 63 1e-09
AL078596-2|CAO03480.1| 422|Homo sapiens nuclear receptor subfam... 63 1e-09
AL078596-1|CAB75626.1| 385|Homo sapiens nuclear receptor subfam... 63 1e-09
AK131541-1|BAD18677.1| 422|Homo sapiens protein ( Homo sapiens ... 63 1e-09
AF411525-1|AAL05871.1| 385|Homo sapiens nuclear receptor subfam... 63 1e-09
AF220532-1|AAG31945.1| 385|Homo sapiens orphan nuclear receptor... 63 1e-09
X51730-1|CAA36018.1| 933|Homo sapiens protein ( Human mRNA and ... 62 1e-09
U22662-1|AAA85856.1| 447|Homo sapiens nuclear orphan receptor L... 62 1e-09
M15716-1|AAA60081.1| 933|Homo sapiens progesterone receptor pro... 62 1e-09
BT019411-1|AAV38218.1| 447|Homo sapiens nuclear receptor subfam... 62 1e-09
BC041172-1|AAH41172.1| 402|Homo sapiens NR1H3 protein protein. 62 1e-09
BC008819-1|AAH08819.1| 387|Homo sapiens NR1H3 protein protein. 62 1e-09
AY525610-1|AAS00096.1| 933|Homo sapiens progesterone receptor p... 62 1e-09
AY382151-1|AAQ96833.1| 255|Homo sapiens progesterone receptor p... 62 1e-09
AF016381-1|AAD01587.1| 933|Homo sapiens progesterone receptor p... 62 1e-09
AB085845-1|BAC11013.1| 803|Homo sapiens delta 6/2 progesterone ... 62 1e-09
AB085844-1|BAC11012.1| 690|Homo sapiens delta4+6/2 progesterone... 62 1e-09
AB085683-1|BAC06585.1| 695|Homo sapiens Progesterone receptor p... 62 1e-09
AB084248-1|BAB91074.1| 831|Homo sapiens delta 4 progesterone re... 62 1e-09
Z49826-1|CAA89990.2| 408|Homo sapiens hepatocyte nuclear factor... 62 2e-09
X67482-1|CAA47824.1| 427|Homo sapiens HL-60 1,25-dihydroxyvitam... 62 2e-09
M65208-1|AAA61274.1| 67|Homo sapiens vitamin D receptor protein. 62 2e-09
J03258-1|AAA61273.1| 427|Homo sapiens VDR protein. 62 2e-09
BC060832-1|AAH60832.1| 427|Homo sapiens VDR protein protein. 62 2e-09
AY342401-1|AAP88938.1| 424|Homo sapiens vitamin D (1,25-dihydro... 62 2e-09
AF133504-1|AAF00110.1| 408|Homo sapiens hepatocyte nuclear fact... 62 2e-09
AF026260-1|AAB95155.1| 427|Homo sapiens vitamin D receptor prot... 62 2e-09
AB002168-1|BAA83389.1| 427|Homo sapiens vitamin D receptor prot... 62 2e-09
L13740-1|AAA36763.1| 598|Homo sapiens TR3 orphan receptor protein. 62 2e-09
D49728-1|BAA08565.1| 598|Homo sapiens DNA binding protein protein. 62 2e-09
CR456704-1|CAG32985.1| 598|Homo sapiens NR4A1 protein. 62 2e-09
BT007144-1|AAP35808.1| 598|Homo sapiens nuclear receptor subfam... 62 2e-09
BC016147-1|AAH16147.1| 598|Homo sapiens nuclear receptor subfam... 62 2e-09
AK131566-1|BAD18699.1| 652|Homo sapiens protein ( Homo sapiens ... 62 2e-09
L07592-1|AAA36469.1| 441|Homo sapiens peroxisome proliferator a... 61 3e-09
BC007578-1|AAH07578.1| 361|Homo sapiens PPARD protein protein. 61 3e-09
BC002715-1|AAH02715.1| 361|Homo sapiens PPARD protein protein. 61 3e-09
AY919140-1|AAX14041.1| 441|Homo sapiens peroxisome proliferator... 61 3e-09
AY442342-1|AAR05439.1| 441|Homo sapiens peroxisome proliferativ... 61 3e-09
AL022721-9|CAD92505.1| 361|Homo sapiens peroxisome proliferativ... 61 3e-09
AL022721-8|CAB38629.1| 441|Homo sapiens peroxisome proliferativ... 61 3e-09
AF246303-1|AAF62553.1| 441|Homo sapiens peroxisome proliferativ... 61 3e-09
AB099507-1|BAC78903.1| 161|Homo sapiens peroxisome proliferativ... 61 3e-09
Z49825-1|CAA89989.1| 504|Homo sapiens hepatocyte nuclear factor... 61 4e-09
Y00479-1|CAA68539.1| 490|Homo sapiens protein ( H.sapiens mRNA ... 61 4e-09
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 61 4e-09
X87872-1|CAA61135.1| 408|Homo sapiens Hepatocyte nuclear factor... 61 4e-09
X87871-1|CAA61134.1| 465|Homo sapiens Hepatocyte nuclear factor... 61 4e-09
X87870-1|CAA61133.1| 455|Homo sapiens Hepatocyte nuclear factor... 61 4e-09
X76930-1|CAA54248.1| 465|Homo sapiens hepatocyte nuclear factor... 61 4e-09
X75918-1|CAA53518.1| 598|Homo sapiens NOT protein. 61 4e-09
X55074-2|CAB57886.1| 490|Homo sapiens thyroid hormone receptor ... 61 4e-09
X55074-1|CAA38899.1| 410|Homo sapiens thyroid hormone receptor ... 61 4e-09
X55005-1|CAA38749.1| 410|Homo sapiens thyriod hormone receptor ... 61 4e-09
X51416-1|CAA35778.1| 521|Homo sapiens protein ( Human mRNA for ... 61 4e-09
U72969-1|AAB48082.1| 516|Homo sapiens hepatocyte nuclear factor... 61 4e-09
U72967-1|AAB48083.1| 408|Homo sapiens hepatocyte nuclear factor... 61 4e-09
U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear o... 61 4e-09
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 61 4e-09
S77154-1|AAB33999.1| 535|Homo sapiens TINUR protein. 61 4e-09
M24899-1|AAA35783.1| 490|Homo sapiens triiodothyronine receptor... 61 4e-09
M24748-2|AAA66021.1| 410|Homo sapiens thyroid receptor alpha-1 ... 61 4e-09
L38487-1|AAB17015.1| 481|Homo sapiens estrogen receptor-related... 61 4e-09
J03239-1|AAA61176.1| 490|Homo sapiens thyroid hormone receptor ... 61 4e-09
EF591040-1|ABQ52204.1| 474|Homo sapiens hepatocyte nuclear fact... 61 4e-09
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 61 4e-09
DQ514553-1|ABF47104.1| 423|Homo sapiens estrogen-related recept... 61 4e-09
CR541915-1|CAG46713.1| 410|Homo sapiens THRA protein. 61 4e-09
BC093722-1|AAH93722.1| 423|Homo sapiens estrogen-related recept... 61 4e-09
BC093720-1|AAH93720.1| 423|Homo sapiens estrogen-related recept... 61 4e-09
BC092470-1|AAH92470.1| 423|Homo sapiens ESRRA protein protein. 61 4e-09
BC066890-1|AAH66890.1| 535|Homo sapiens nuclear receptor subfam... 61 4e-09
BC063795-1|AAH63795.2| 423|Homo sapiens estrogen-related recept... 61 4e-09
BC035137-1|AAH35137.1| 451|Homo sapiens THRA protein protein. 61 4e-09
BC009288-1|AAH09288.1| 598|Homo sapiens nuclear receptor subfam... 61 4e-09
BC008851-1|AAH08851.1| 410|Homo sapiens THRA protein protein. 61 4e-09
BC002728-1|AAH02728.1| 490|Homo sapiens thyroid hormone recepto... 61 4e-09
BC000261-1|AAH00261.1| 490|Homo sapiens thyroid hormone recepto... 61 4e-09
AY680698-1|AAT91239.1| 395|Homo sapiens hepatocyte nuclear fact... 61 4e-09
AY680697-1|AAT91238.1| 452|Homo sapiens hepatocyte nuclear fact... 61 4e-09
AY680696-1|AAT91237.1| 442|Homo sapiens hepatocyte nuclear fact... 61 4e-09
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 61 4e-09
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 61 4e-09
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 61 4e-09
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 61 4e-09
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 61 4e-09
AL132772-10|CAI18863.1| 100|Homo sapiens hepatocyte nuclear fac... 61 4e-09
AL132772-3|CAI18857.1| 467|Homo sapiens hepatocyte nuclear fact... 61 4e-09
AL132772-2|CAC01303.1| 474|Homo sapiens hepatocyte nuclear fact... 61 4e-09
AL132772-1|CAI18856.1| 417|Homo sapiens hepatocyte nuclear fact... 61 4e-09
AL117382-6|CAI23113.1| 100|Homo sapiens hepatocyte nuclear fact... 61 4e-09
AK223625-1|BAD97345.1| 598|Homo sapiens nuclear receptor subfam... 61 4e-09
AC074099-1|AAY24203.1| 598|Homo sapiens unknown protein. 61 4e-09
AB209346-1|BAD92583.1| 397|Homo sapiens thyroid hormone recepto... 61 4e-09
AB019433-1|BAA77328.1| 598|Homo sapiens T-cell nuclear receptor... 61 4e-09
AB017586-1|BAA75666.1| 598|Homo sapiens Nurr1 protein. 61 4e-09
X03635-2|CAA27284.1| 595|Homo sapiens oestrogen receptor protein. 60 6e-09
U47678-1|AAB00115.1| 701|Homo sapiens 80 kDa estrogen receptor ... 60 6e-09
U14534-1|AAA58594.1| 455|Homo sapiens orphan receptor protein. 60 6e-09
U07132-1|AAA61783.1| 461|Homo sapiens Ner-I protein. 60 6e-09
S74349-1|AAB32649.1| 468|Homo sapiens peroxisome proliferator a... 60 6e-09
M69296-1|AAA58461.1| 336|Homo sapiens estrogen receptor-related... 60 6e-09
M12674-1|AAA52399.1| 595|Homo sapiens ESR protein. 60 6e-09
L02932-1|AAA36468.1| 468|Homo sapiens peroxisome proliferator a... 60 6e-09
CR542091-1|CAG46888.1| 408|Homo sapiens HNF4G protein. 60 6e-09
CR457435-1|CAG33716.1| 468|Homo sapiens PPARA protein. 60 6e-09
CR456706-1|CAG32987.1| 461|Homo sapiens NR1H2 protein. 60 6e-09
CR456547-1|CAG30433.1| 468|Homo sapiens PPARA protein. 60 6e-09
BC128574-1|AAI28575.1| 595|Homo sapiens estrogen receptor 1 pro... 60 6e-09
BC128573-1|AAI28574.1| 595|Homo sapiens estrogen receptor 1 pro... 60 6e-09
BC105011-1|AAI05012.1| 408|Homo sapiens HNF4G protein protein. 60 6e-09
BC105009-1|AAI05010.1| 408|Homo sapiens HNF4G protein protein. 60 6e-09
BC074500-1|AAH74500.1| 461|Homo sapiens nuclear receptor subfam... 60 6e-09
BC054009-1|AAH54009.1| 80|Homo sapiens HNF4G protein protein. 60 6e-09
BC047750-1|AAH47750.1| 461|Homo sapiens nuclear receptor subfam... 60 6e-09
BC033500-1|AAH33500.1| 461|Homo sapiens nuclear receptor subfam... 60 6e-09
BC007790-1|AAH07790.1| 461|Homo sapiens nuclear receptor subfam... 60 6e-09
BC000052-1|AAH00052.1| 258|Homo sapiens peroxisome proliferator... 60 6e-09
AY425004-1|AAQ91815.1| 595|Homo sapiens estrogen receptor 1 pro... 60 6e-09
AY206718-1|AAO13489.1| 468|Homo sapiens peroxisome proliferativ... 60 6e-09
AL590993-1|CAI14237.1| 595|Homo sapiens estrogen receptor 1 pro... 60 6e-09
AL356311-2|CAI21012.1| 595|Homo sapiens estrogen receptor 1 pro... 60 6e-09
AL078611-2|CAI18764.1| 468|Homo sapiens peroxisome proliferativ... 60 6e-09
AL078582-4|CAI42285.1| 595|Homo sapiens estrogen receptor 1 pro... 60 6e-09
AL049856-1|CAI22450.1| 468|Homo sapiens peroxisome proliferativ... 60 6e-09
AL049821-1|CAI22123.1| 595|Homo sapiens estrogen receptor 1 pro... 60 6e-09
AF123500-1|AAD52984.1| 444|Homo sapiens estrogen receptor alpha... 60 6e-09
X90563-2|CAA62153.1| 475|Homo sapiens peroxisome proliferator a... 60 7e-09
X90563-1|CAA62152.1| 477|Homo sapiens peroxisome proliferator a... 60 7e-09
U79012-1|AAC51248.1| 505|Homo sapiens ligand activated transcri... 60 7e-09
U63415-1|AAB04028.1| 505|Homo sapiens peroxisome proliferator a... 60 7e-09
L40904-1|AAA80314.2| 477|Homo sapiens peroxisome proliferator a... 60 7e-09
D83233-1|BAA18949.1| 506|Homo sapiens PPAR gamma2 protein. 60 7e-09
DQ356894-1|ABC97372.1| 186|Homo sapiens peroxisome proliferativ... 60 7e-09
BT007281-1|AAP35945.1| 477|Homo sapiens peroxisome proliferativ... 60 7e-09
BC006811-1|AAH06811.1| 477|Homo sapiens peroxisome proliferator... 60 7e-09
AY222643-1|AAO66458.1| 584|Homo sapiens CREB3L2-PPARgamma protein. 60 7e-09
AY157024-1|AAN38992.2| 475|Homo sapiens peroxisome proliferativ... 60 7e-09
AK223528-1|BAD97248.1| 478|Homo sapiens peroxisome proliferativ... 60 7e-09
AJ698135-1|CAG29019.1| 248|Homo sapiens peroxisome proliferativ... 60 7e-09
AJ563370-1|CAD91389.1| 264|Homo sapiens peroxisome proliferativ... 60 7e-09
AJ563369-1|CAD91388.1| 280|Homo sapiens peroxisome proliferativ... 60 7e-09
AB005526-1|BAA23354.1| 474|Homo sapiens peroxisome proliferator... 60 7e-09
X51417-1|CAA35779.1| 433|Homo sapiens protein ( Human mRNA for ... 60 1e-08
X04707-1|CAA28412.1| 456|Homo sapiens put.thyroid hormone recep... 60 1e-08
M26747-1|AAA35677.1| 456|Homo sapiens c-erbA protein. 60 1e-08
BC131517-1|AAI31518.1| 503|Homo sapiens ESRRB protein protein. 60 1e-08
BC106930-1|AAI06931.1| 461|Homo sapiens THRB protein protein. 60 1e-08
BC106929-1|AAI06930.1| 461|Homo sapiens thyroid hormone recepto... 60 1e-08
BC064700-1|AAH64700.1| 442|Homo sapiens ESRRG protein protein. 60 1e-08
BC008218-1|AAH08218.1| 343|Homo sapiens ESRRG protein protein. 60 1e-08
AY528719-1|AAS00098.1| 435|Homo sapiens estrogen-related recept... 60 1e-08
AY451390-1|AAS15572.1| 508|Homo sapiens estrogen receptor-relat... 60 1e-08
AY451389-1|AAS15571.1| 433|Homo sapiens estrogen receptor-relat... 60 1e-08
AY388461-1|AAQ93381.1| 435|Homo sapiens estrogen-related recept... 60 1e-08
AY388460-1|AAQ93380.1| 435|Homo sapiens estrogen-related recept... 60 1e-08
AY388459-1|AAQ93379.1| 435|Homo sapiens estrogen-related recept... 60 1e-08
AY388458-1|AAQ93378.1| 435|Homo sapiens estrogen-related recept... 60 1e-08
AY388457-1|AAQ93377.1| 435|Homo sapiens estrogen-related recept... 60 1e-08
AY388456-1|AAQ93376.1| 458|Homo sapiens estrogen-related recept... 60 1e-08
AL512650-2|CAH71595.1| 442|Homo sapiens estrogen-related recept... 60 1e-08
AL512650-1|CAH71594.1| 435|Homo sapiens estrogen-related recept... 60 1e-08
AL445650-2|CAH70619.1| 442|Homo sapiens estrogen-related recept... 60 1e-08
AL445650-1|CAH70618.1| 435|Homo sapiens estrogen-related recept... 60 1e-08
AF094518-1|AAC99410.1| 458|Homo sapiens nuclear receptor ERRG2 ... 60 1e-08
AF094517-1|AAC99409.1| 500|Homo sapiens nuclear receptor ERRB2 ... 60 1e-08
AC016543-1|AAG29619.1| 262|Homo sapiens hERRB2 protein. 60 1e-08
AB020639-1|BAA74855.2| 469|Homo sapiens KIAA0832 protein protein. 60 1e-08
X99101-1|CAA67555.1| 477|Homo sapiens estrogen receptor beta pr... 59 2e-08
DQ838583-1|ABH09190.1| 472|Homo sapiens estrogen receptor beta ... 59 2e-08
DQ838582-1|ABH09189.1| 481|Homo sapiens estrogen receptor beta ... 59 2e-08
DQ777076-1|ABG88022.1| 474|Homo sapiens estrogen receptor beta ... 59 2e-08
BC024181-1|AAH24181.1| 323|Homo sapiens ESR2 protein protein. 59 2e-08
AY785359-1|AAV31779.1| 530|Homo sapiens estrogen receptor 2 (ER... 59 2e-08
AF215937-2|AAG29940.1| 530|Homo sapiens 5p152 protein. 59 2e-08
AF124790-1|AAD32580.1| 323|Homo sapiens estrogen receptor beta2... 59 2e-08
AF074599-1|AAC25603.1| 381|Homo sapiens estrogen receptor beta ... 59 2e-08
AF060555-1|AAC15234.1| 513|Homo sapiens estrogen receptor beta ... 59 2e-08
AF051428-1|AAC05751.1| 495|Homo sapiens estrogen receptor beta2... 59 2e-08
AF051427-1|AAC05985.1| 530|Homo sapiens estrogen receptor beta ... 59 2e-08
AB209620-1|BAD92857.1| 504|Homo sapiens estrogen receptor 2 (ER... 59 2e-08
AB006590-1|BAA24953.1| 530|Homo sapiens estrogen receptor beta ... 59 2e-08
AB006589-1|BAA31966.1| 495|Homo sapiens estrogen receptor beta ... 59 2e-08
M16801-1|AAA59571.1| 984|Homo sapiens MLR protein. 58 2e-08
BC111758-1|AAI11759.1| 867|Homo sapiens NR3C2 protein protein. 58 2e-08
AJ315514-1|CAC67405.1| 706|Homo sapiens mineralocorticoid recep... 58 2e-08
AF068623-1|AAC63513.1| 440|Homo sapiens mineralocorticoid recep... 58 2e-08
AB209056-1|BAD92293.1| 853|Homo sapiens nuclear receptor subfam... 58 2e-08
Y07619-1|CAA68898.1| 468|Homo sapiens peroxisome proliferator-a... 58 3e-08
AJ276674-1|CAB82769.1| 410|Homo sapiens photoreceptor-specific ... 58 4e-08
AF148128-1|AAF22227.1| 367|Homo sapiens nuclear receptor protein. 58 4e-08
AF121129-1|AAD28301.1| 410|Homo sapiens photoreceptor-specific ... 58 4e-08
AF058291-1|AAC39899.1| 436|Homo sapiens estrogen-related recept... 57 7e-08
X03348-1|CAA27054.1| 742|Homo sapiens beta-glucocorticoid recep... 56 2e-07
X03225-1|CAA26976.1| 777|Homo sapiens alpha-glucocorticoid rece... 56 2e-07
U80947-1|AAB64354.1| 742|Homo sapiens glucocorticoid receptor b... 56 2e-07
U80946-1|AAB64353.1| 777|Homo sapiens glucocorticoid receptor a... 56 2e-07
M20260-1|AAA51774.1| 452|Homo sapiens AR protein. 56 2e-07
EF428110-1|ABR57508.1| 146|Homo sapiens protein kinase A regula... 56 2e-07
BC015610-1|AAH15610.1| 777|Homo sapiens nuclear receptor subfam... 56 2e-07
AY436590-1|AAQ97180.1| 777|Homo sapiens nuclear receptor subfam... 56 2e-07
AM183262-1|CAJ65924.1| 751|Homo sapiens glucocorticoid receptor... 56 2e-07
AK223594-1|BAD97314.1| 777|Homo sapiens nuclear receptor subfam... 56 2e-07
AC005601-1|AAC34207.1| 235|Homo sapiens glucocorticoid receptor... 56 2e-07
M73069-1|AAA51735.1| 730|Homo sapiens androgen receptor protein. 54 5e-07
M35851-1|AAA51772.1| 917|Homo sapiens androgen receptor protein. 54 5e-07
M34233-1|AAA51780.1| 906|Homo sapiens AR protein. 54 5e-07
M27430-1|AAA51886.1| 919|Homo sapiens AR protein. 54 5e-07
M23263-1|AAA51775.1| 918|Homo sapiens androgen receptor protein. 54 5e-07
M21748-1|AAA51771.1| 917|Homo sapiens androgen receptor protein. 54 5e-07
M20132-1|AAA51729.1| 919|Homo sapiens AR protein. 54 5e-07
L29496-1|AAA51770.1| 734|Homo sapiens AR protein. 54 5e-07
BC132975-1|AAI32976.1| 914|Homo sapiens AR protein protein. 54 5e-07
AL356358-1|CAI40496.1| 920|Homo sapiens androgen receptor (dihy... 54 5e-07
AL158016-1|CAI40853.1| 920|Homo sapiens androgen receptor (dihy... 54 5e-07
AL049564-2|CAI43080.1| 920|Homo sapiens androgen receptor (dihy... 54 5e-07
AF162704-1|AAD45921.1| 906|Homo sapiens androgen receptor protein. 54 5e-07
U01351-2|AAA16603.1| 778|Homo sapiens glucocorticoid receptor a... 53 9e-07
AB085843-1|BAC11011.1| 764|Homo sapiens delta 3+6/2 progesteron... 53 1e-06
U32592-1|AAA75332.1| 56|Homo sapiens steroidogenic factor 1 pr... 52 2e-06
M69297-1|AAA58462.1| 220|Homo sapiens estrogen receptor-related... 51 5e-06
AY013703-1|AAG41594.2| 58|Homo sapiens retinoic acid receptor ... 51 5e-06
D85245-1|BAA12746.1| 325|Homo sapiens TR3beta protein. 50 6e-06
AC106889-1|AAY41033.1| 46|Homo sapiens unknown protein. 50 8e-06
CR536558-1|CAG38795.1| 336|Homo sapiens RARB protein. 50 1e-05
BC050415-1|AAH50415.2| 346|Homo sapiens RARB protein protein. 50 1e-05
AY501390-1|AAS85757.1| 336|Homo sapiens retinoic acid receptor ... 50 1e-05
AF157483-1|AAD45688.1| 336|Homo sapiens retinoic acid receptor ... 50 1e-05
D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein. 49 2e-05
X04014-1|CAA27637.1| 173|Homo sapiens hypothetical protein prot... 46 1e-04
M57445-1|AAA58728.1| 49|Homo sapiens retinoic acid receptor pr... 46 1e-04
AB009577-1|BAB18655.1| 34|Homo sapiens Ad4BP protein. 45 2e-04
BC041421-1|AAH41421.1| 322|Homo sapiens NR2E3 protein protein. 44 5e-04
AJ009937-3|CAB55494.1| 342|Homo sapiens nuclear hormone recepto... 39 0.015
AJ009936-3|CAB55491.1| 379|Homo sapiens nuclear hormone recepto... 39 0.015
AJ315515-1|CAC67406.1| 112|Homo sapiens putative mineralocortic... 35 0.32
S82307-1|AAB47194.2| 133|Homo sapiens p65 protein. 34 0.42
BC033701-1|AAH33701.1| 299|Homo sapiens Similar to estrogen-rel... 34 0.56
BC007915-1|AAH07915.2| 320|Homo sapiens ESRRA protein protein. 34 0.56
X73067-1|CAA51528.1| 107|Homo sapiens estrogen receptor protein. 33 0.74
BC069651-1|AAH69651.1| 274|Homo sapiens NR1I3 protein protein. 33 0.98
AY572827-1|AAT47180.1| 319|Homo sapiens constitutive androstane... 33 0.98
AY572820-1|AAT47173.1| 263|Homo sapiens constitutive androstane... 33 0.98
AY572818-1|AAT47171.1| 288|Homo sapiens constitutive androstane... 33 0.98
AY572817-1|AAT47170.1| 293|Homo sapiens constitutive androstane... 33 0.98
AY572816-1|AAT47169.1| 249|Homo sapiens constitutive androstane... 33 0.98
AY572812-1|AAT47165.1| 297|Homo sapiens constitutive androstane... 33 0.98
AY572811-1|AAT47164.1| 324|Homo sapiens constitutive androstane... 33 0.98
AY572808-1|AAT47161.1| 280|Homo sapiens constitutive androstane... 33 0.98
AY572825-1|AAT47178.1| 118|Homo sapiens constitutive androstane... 32 1.7
AY572824-1|AAT47177.1| 118|Homo sapiens constitutive androstane... 32 1.7
AY572815-1|AAT47168.1| 90|Homo sapiens constitutive androstane... 32 1.7
AY572814-1|AAT47167.1| 90|Homo sapiens constitutive androstane... 32 1.7
AY572809-1|AAT47162.1| 90|Homo sapiens constitutive androstane... 32 1.7
AJ417079-1|CAD10506.1| 99|Homo sapiens PML/RARA fusion protein... 32 2.3
AJ002425-1|CAA05410.2| 614|Homo sapiens protein protein. 32 2.3
X14885-1|CAA33024.1| 410|Homo sapiens ransforming growth factor... 31 4.0
X14149-1|CAA32362.1| 412|Homo sapiens protein ( Human mRNA for ... 31 4.0
J03241-1|AAA61161.1| 412|Homo sapiens TGFB3 protein. 31 4.0
EF560714-1|ABQ59024.1| 412|Homo sapiens TGFB3 protein protein. 31 4.0
AY208161-1|AAO13495.1| 412|Homo sapiens transforming growth fac... 31 4.0
AY140241-1|AAM96819.1| 412|Homo sapiens transforming growth fac... 31 4.0
AF107885-3|AAC79727.1| 412|Homo sapiens transforming growth fac... 31 4.0
BC034418-1|AAH34418.1| 603|Homo sapiens NBPF1 protein protein. 31 5.2
AY894575-1|AAX85114.1| 1214|Homo sapiens NBPF1 protein. 31 5.2
AF420437-1|AAO15443.1| 81|Homo sapiens AB14 protein. 31 5.2
AF379628-1|AAO15396.1| 175|Homo sapiens AD2 protein. 31 5.2
AF379626-1|AAO15394.1| 502|Homo sapiens AC3 protein. 31 5.2
AF379624-1|AAO15393.1| 967|Homo sapiens AB25 protein. 31 5.2
AF379622-1|AAO15391.1| 358|Homo sapiens AB18 protein. 31 5.2
AF379620-1|AAO15390.1| 82|Homo sapiens AB14 protein. 31 5.2
AF379619-1|AAO15389.1| 82|Homo sapiens AB13 protein. 31 5.2
AF379616-1|AAO15388.1| 420|Homo sapiens AB6 protein. 31 5.2
AF379607-1|AAO15407.1| 175|Homo sapiens NBG protein. 31 5.2
AB051480-1|BAB21784.1| 901|Homo sapiens KIAA1693 protein protein. 31 5.2
>BC100990-1|AAI00991.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 102 bits (244), Expect = 1e-21
Identities = 40/55 (72%), Positives = 48/55 (87%)
Frame = +3
Query: 420 SIRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+++AQIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + Y CPR K C++
Sbjct: 8 AMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLI 62
Score = 70.9 bits (166), Expect = 4e-12
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL +GMSRDAVKFGRMSK QR+
Sbjct: 63 DRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRD 99
>BC100989-1|AAI00990.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 102 bits (244), Expect = 1e-21
Identities = 40/55 (72%), Positives = 48/55 (87%)
Frame = +3
Query: 420 SIRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+++AQIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + Y CPR K C++
Sbjct: 8 AMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLI 62
Score = 70.9 bits (166), Expect = 4e-12
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL +GMSRDAVKFGRMSK QR+
Sbjct: 63 DRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRD 99
>BC100988-1|AAI00989.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 102 bits (244), Expect = 1e-21
Identities = 40/55 (72%), Positives = 48/55 (87%)
Frame = +3
Query: 420 SIRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+++AQIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + Y CPR K C++
Sbjct: 8 AMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLI 62
Score = 70.9 bits (166), Expect = 4e-12
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL +GMSRDAVKFGRMSK QR+
Sbjct: 63 DRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRD 99
>BC100987-1|AAI00988.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 102 bits (244), Expect = 1e-21
Identities = 40/55 (72%), Positives = 48/55 (87%)
Frame = +3
Query: 420 SIRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+++AQIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + Y CPR K C++
Sbjct: 8 AMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLI 62
Score = 70.9 bits (166), Expect = 4e-12
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL +GMSRDAVKFGRMSK QR+
Sbjct: 63 DRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRD 99
>L14611-1|AAA02963.1| 468|Homo sapiens transcription factor
protein.
Length = 468
Score = 101 bits (243), Expect = 2e-21
Identities = 40/54 (74%), Positives = 47/54 (87%)
Frame = +3
Query: 423 IRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
++AQIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + Y CPR K C++
Sbjct: 9 MKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLI 62
Score = 70.9 bits (166), Expect = 4e-12
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL +GMSRDAVKFGRMSK QR+
Sbjct: 63 DRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRD 99
>Y08639-1|CAA69929.1| 459|Homo sapiens nuclear orphan receptor
ROR-beta protein.
Length = 459
Score = 101 bits (242), Expect = 2e-21
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = +3
Query: 423 IRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+RAQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ +Y CPR + C++
Sbjct: 1 MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLI 54
Score = 74.1 bits (174), Expect = 4e-13
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR NRNRCQ+CRLQKCL LGMSRDAVKFGRMSK QR+
Sbjct: 55 DRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD 91
>U04899-1|AAA62660.1| 548|Homo sapiens RORalpha3 protein.
Length = 548
Score = 101 bits (242), Expect = 2e-21
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +3
Query: 426 RAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+AQIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + Y CPR K C++
Sbjct: 90 KAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLI 142
Score = 70.9 bits (166), Expect = 4e-12
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL +GMSRDAVKFGRMSK QR+
Sbjct: 143 DRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRD 179
>BC093774-1|AAH93774.1| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 101 bits (242), Expect = 2e-21
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = +3
Query: 423 IRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+RAQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ +Y CPR + C++
Sbjct: 1 MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLI 54
Score = 74.1 bits (174), Expect = 4e-13
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR NRNRCQ+CRLQKCL LGMSRDAVKFGRMSK QR+
Sbjct: 55 DRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD 91
>BC093772-1|AAH93772.1| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 101 bits (242), Expect = 2e-21
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = +3
Query: 423 IRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+RAQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ +Y CPR + C++
Sbjct: 1 MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLI 54
Score = 74.1 bits (174), Expect = 4e-13
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR NRNRCQ+CRLQKCL LGMSRDAVKFGRMSK QR+
Sbjct: 55 DRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD 91
>BC051830-1|AAH51830.1| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 101 bits (242), Expect = 2e-21
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = +3
Query: 423 IRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+RAQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ +Y CPR + C++
Sbjct: 1 MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLI 54
Score = 74.1 bits (174), Expect = 4e-13
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR NRNRCQ+CRLQKCL LGMSRDAVKFGRMSK QR+
Sbjct: 55 DRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD 91
>AL355674-1|CAD13280.2| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 101 bits (242), Expect = 2e-21
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = +3
Query: 423 IRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+RAQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ +Y CPR + C++
Sbjct: 1 MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLI 54
Score = 74.1 bits (174), Expect = 4e-13
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR NRNRCQ+CRLQKCL LGMSRDAVKFGRMSK QR+
Sbjct: 55 DRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD 91
>AL137018-1|CAD13276.2| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 101 bits (242), Expect = 2e-21
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = +3
Query: 423 IRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+RAQIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ +Y CPR + C++
Sbjct: 1 MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLI 54
Score = 74.1 bits (174), Expect = 4e-13
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR NRNRCQ+CRLQKCL LGMSRDAVKFGRMSK QR+
Sbjct: 55 DRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD 91
>U04898-1|AAA62659.1| 556|Homo sapiens RORalpha2 protein.
Length = 556
Score = 101 bits (241), Expect = 3e-21
Identities = 40/54 (74%), Positives = 46/54 (85%)
Frame = +3
Query: 423 IRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+ AQIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + Y CPR K C++
Sbjct: 97 MNAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLI 150
Score = 70.9 bits (166), Expect = 4e-12
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL +GMSRDAVKFGRMSK QR+
Sbjct: 151 DRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRD 187
>U04897-1|AAA62658.1| 523|Homo sapiens RORalpha1 protein.
Length = 523
Score = 99.5 bits (237), Expect = 1e-20
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = +3
Query: 429 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+QIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + Y CPR K C++
Sbjct: 66 SQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLI 117
Score = 70.9 bits (166), Expect = 4e-12
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL +GMSRDAVKFGRMSK QR+
Sbjct: 118 DRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRD 154
>BC008831-1|AAH08831.1| 523|Homo sapiens RAR-related orphan
receptor A protein.
Length = 523
Score = 99.5 bits (237), Expect = 1e-20
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = +3
Query: 429 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+QIEIIPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ + Y CPR K C++
Sbjct: 66 SQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLI 117
Score = 70.9 bits (166), Expect = 4e-12
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL +GMSRDAVKFGRMSK QR+
Sbjct: 118 DRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRD 154
>AL589765-17|CAI17179.1| 497|Homo sapiens RAR-related orphan
receptor C protein.
Length = 497
Score = 93.1 bits (221), Expect = 9e-19
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = +3
Query: 423 IRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+R QIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ Y C R + C +
Sbjct: 1 MRTQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQRCNAAYSCTRQQNCPI 54
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL LGMSRDAVKFGRMSK QR+
Sbjct: 55 DRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD 91
>U16997-1|AAA64751.1| 560|Homo sapiens ROR gamma protein.
Length = 560
Score = 91.1 bits (216), Expect = 3e-18
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = +3
Query: 429 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+QIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ Y C R + C +
Sbjct: 24 SQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQRCNAAYSCTRQQNCPI 75
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL LGMSRDAVKFGRMSK QR+
Sbjct: 76 DRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD 112
>CR457436-1|CAG33717.1| 518|Homo sapiens RORC protein.
Length = 518
Score = 91.1 bits (216), Expect = 3e-18
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = +3
Query: 429 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+QIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ Y C R + C +
Sbjct: 24 SQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQRCNAAYSCTRQQNCPI 75
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL LGMSRDAVKFGRMSK QR+
Sbjct: 76 DRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD 112
>BC110571-1|AAI10572.1| 518|Homo sapiens RAR-related orphan
receptor C protein.
Length = 518
Score = 91.1 bits (216), Expect = 3e-18
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = +3
Query: 429 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+QIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ Y C R + C +
Sbjct: 24 SQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQRCNAAYSCTRQQNCPI 75
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL LGMSRDAVKFGRMSK QR+
Sbjct: 76 DRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD 112
>BC031554-1|AAH31554.1| 518|Homo sapiens RAR-related orphan
receptor C protein.
Length = 518
Score = 91.1 bits (216), Expect = 3e-18
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = +3
Query: 429 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+QIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ Y C R + C +
Sbjct: 24 SQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQRCNAAYSCTRQQNCPI 75
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL LGMSRDAVKFGRMSK QR+
Sbjct: 76 DRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD 112
>AL589765-18|CAI17180.1| 518|Homo sapiens RAR-related orphan
receptor C protein.
Length = 518
Score = 91.1 bits (216), Expect = 3e-18
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = +3
Query: 429 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+QIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ Y C R + C +
Sbjct: 24 SQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQRCNAAYSCTRQQNCPI 75
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL LGMSRDAVKFGRMSK QR+
Sbjct: 76 DRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD 112
>AK223137-1|BAD96857.1| 518|Homo sapiens RAR-related orphan
receptor C isoform a variant protein.
Length = 518
Score = 91.1 bits (216), Expect = 3e-18
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = +3
Query: 429 AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
+QIE+IPCK+CGDKSSG+HYGVITCEGCKGFFRRSQ Y C R + C +
Sbjct: 24 SQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQRCNAAYSCTRQQNCPI 75
Score = 72.1 bits (169), Expect = 2e-12
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
DR +RNRCQ+CRLQKCL LGMSRDAVKFGRMSK QR+
Sbjct: 76 DRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRD 112
>AJ250835-1|CAB60726.1| 381|Homo sapiens retinoic acid receptor
protein.
Length = 381
Score = 72.9 bits (171), Expect = 1e-12
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV +CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 16 PCFVCNDKSSGYHYGVSSCEGCKGFFRRSTQKNMVYTCHRDKNCIINK 63
Score = 50.8 bits (116), Expect = 5e-06
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS++AV+ R K
Sbjct: 62 NKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKK 94
>M57707-1|AAA63254.1| 454|Homo sapiens retinoic acid receptor-gamma
protein.
Length = 454
Score = 72.1 bits (169), Expect = 2e-12
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV +CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 89 PCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINK 136
Score = 50.8 bits (116), Expect = 5e-06
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS++AV+ R K
Sbjct: 135 NKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKK 167
>M38258-1|AAA60254.1| 454|Homo sapiens retinoic acid
receptor-gamma-1 protein.
Length = 454
Score = 72.1 bits (169), Expect = 2e-12
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV +CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 89 PCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINK 136
Score = 50.8 bits (116), Expect = 5e-06
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS++AV+ R K
Sbjct: 135 NKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKK 167
>M24857-1|AAA52692.1| 454|Homo sapiens RARG protein.
Length = 454
Score = 72.1 bits (169), Expect = 2e-12
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV +CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 89 PCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINK 136
Score = 50.8 bits (116), Expect = 5e-06
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS++AV+ R K
Sbjct: 135 NKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKK 167
>BC093729-1|AAH93729.1| 454|Homo sapiens retinoic acid receptor,
gamma protein.
Length = 454
Score = 72.1 bits (169), Expect = 2e-12
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV +CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 89 PCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINK 136
Score = 50.8 bits (116), Expect = 5e-06
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS++AV+ R K
Sbjct: 135 NKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKK 167
>BC093727-1|AAH93727.1| 454|Homo sapiens retinoic acid receptor,
gamma protein.
Length = 454
Score = 72.1 bits (169), Expect = 2e-12
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV +CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 89 PCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINK 136
Score = 50.8 bits (116), Expect = 5e-06
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS++AV+ R K
Sbjct: 135 NKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKK 167
>Y00291-1|CAA68398.1| 448|Homo sapiens protein ( Human hap mRNA
encoding a DNA-binding hormone receptor. ).
Length = 448
Score = 71.3 bits (167), Expect = 3e-12
Identities = 30/48 (62%), Positives = 34/48 (70%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV CEGCKGFFRRS + Y C R+K CV+ +
Sbjct: 80 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINK 127
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS+++V+ R K
Sbjct: 126 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKK 158
>X07282-1|CAA30262.1| 448|Homo sapiens protein ( Human mRNA for
retinoic acid receptor-epsilon protein. ).
Length = 448
Score = 71.3 bits (167), Expect = 3e-12
Identities = 30/48 (62%), Positives = 34/48 (70%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV CEGCKGFFRRS + Y C R+K CV+ +
Sbjct: 80 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINK 127
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS+++V+ R K
Sbjct: 126 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKK 158
>DQ083391-1|AAZ32403.1| 184|Homo sapiens retinoic acid receptor
beta 1' protein.
Length = 184
Score = 71.3 bits (167), Expect = 3e-12
Identities = 30/48 (62%), Positives = 34/48 (70%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV CEGCKGFFRRS + Y C R+K CV+ +
Sbjct: 37 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINK 84
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS+++V+ R K
Sbjct: 83 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKK 115
>BC060794-1|AAH60794.1| 448|Homo sapiens retinoic acid receptor,
beta protein.
Length = 448
Score = 71.3 bits (167), Expect = 3e-12
Identities = 30/48 (62%), Positives = 34/48 (70%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV CEGCKGFFRRS + Y C R+K CV+ +
Sbjct: 80 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINK 127
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS+++V+ R K
Sbjct: 126 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKK 158
>X06614-1|CAA29829.1| 462|Homo sapiens protein ( Human mRNA for
receptor of retinoic acid. ).
Length = 462
Score = 70.9 bits (166), Expect = 4e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINK 134
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS+++V+ R K
Sbjct: 133 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKK 165
>X06538-1|CAA29787.1| 432|Homo sapiens protein ( Human mRNA for
retinoic acid receptor. ).
Length = 432
Score = 70.9 bits (166), Expect = 4e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 57 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINK 104
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS+++V+ R K
Sbjct: 103 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKK 135
>U41743-1|AAB00113.1| 520|Homo sapiens nucleophosmin-retinoic acid
receptor alpha fusion protein NPM-RAR short form
protein.
Length = 520
Score = 70.9 bits (166), Expect = 4e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 145 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINK 192
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS+++V+ R K
Sbjct: 191 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKK 223
>U41742-1|AAB00112.1| 563|Homo sapiens nucleophosmin-retinoic acid
receptor alpha fusion protein NPM-RAR long form protein.
Length = 563
Score = 70.9 bits (166), Expect = 4e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 188 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINK 235
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS+++V+ R K
Sbjct: 234 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKK 266
>S50916-1|AAB19602.2| 416|Homo sapiens retinoic acid receptor alpha
protein.
Length = 416
Score = 70.9 bits (166), Expect = 4e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 41 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINK 88
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS+++V+ R K
Sbjct: 87 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKK 119
>M73779-1|AAA60126.1| 797|Homo sapiens PML-RAR protein protein.
Length = 797
Score = 70.9 bits (166), Expect = 4e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 422 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINK 469
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS+++V+ R K
Sbjct: 468 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKK 500
>CR457438-1|CAG33719.1| 462|Homo sapiens RARA protein.
Length = 462
Score = 70.9 bits (166), Expect = 4e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINK 134
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS+++V+ R K
Sbjct: 133 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKK 165
>BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,
alpha protein.
Length = 457
Score = 70.9 bits (166), Expect = 4e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 82 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINK 129
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS+++V+ R K
Sbjct: 128 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKK 160
>BC008727-1|AAH08727.1| 462|Homo sapiens retinoic acid receptor,
alpha protein.
Length = 462
Score = 70.9 bits (166), Expect = 4e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINK 134
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS+++V+ R K
Sbjct: 133 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKK 165
>AF088895-1|AAD05222.1| 462|Homo sapiens retinoic acid receptor
alpha protein.
Length = 462
Score = 70.9 bits (166), Expect = 4e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 87 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINK 134
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS+++V+ R K
Sbjct: 133 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKK 165
>AF012304-1|AAC33511.1| 194|Homo sapiens nuclear mitotic apparatus
protein-retinoic acid receptor alpha fusion protein
protein.
Length = 194
Score = 70.9 bits (166), Expect = 4e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +3
Query: 447 PCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
PC VC DKSSG HYGV CEGCKGFFRRS + Y C R+K C++ +
Sbjct: 91 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINK 138
Score = 49.6 bits (113), Expect = 1e-05
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
++V RNRCQYCRLQKC ++GMS+++V+ R K
Sbjct: 137 NKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKK 169
>X99975-1|CAA68236.1| 480|Homo sapiens hRTR/hGCNF protein protein.
Length = 480
Score = 70.5 bits (165), Expect = 5e-12
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+++G+HYG+I+CEGCKGFF+RS Y+C R+K CV+ + Q
Sbjct: 60 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQ 108
Score = 43.6 bits (98), Expect = 7e-04
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVK 666
R RNRCQYCRL KCL++GM+R ++
Sbjct: 106 RKQRNRCQYCRLLKCLQMGMNRKTIR 131
>U80802-1|AAB96828.1| 480|Homo sapiens orphan nuclear receptor GCNF
protein.
Length = 480
Score = 70.5 bits (165), Expect = 5e-12
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+++G+HYG+I+CEGCKGFF+RS Y+C R+K CV+ + Q
Sbjct: 60 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQ 108
Score = 45.2 bits (102), Expect = 2e-04
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVK 666
R RNRCQYCRL KCL++GM+R A++
Sbjct: 106 RKQRNRCQYCRLLKCLQMGMNRKAIR 131
>S83309-1|AAB50876.1| 476|Homo sapiens germ cell nuclear factor
protein.
Length = 476
Score = 70.5 bits (165), Expect = 5e-12
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+++G+HYG+I+CEGCKGFF+RS Y+C R+K CV+ + Q
Sbjct: 56 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQ 104
Score = 45.2 bits (102), Expect = 2e-04
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVK 666
R RNRCQYCRL KCL++GM+R A++
Sbjct: 102 RKQRNRCQYCRLLKCLQMGMNRKAIR 127
>BC030600-1|AAH30600.1| 475|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 475
Score = 70.5 bits (165), Expect = 5e-12
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+++G+HYG+I+CEGCKGFF+RS Y+C R+K CV+ + Q
Sbjct: 56 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQ 104
Score = 45.2 bits (102), Expect = 2e-04
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVK 666
R RNRCQYCRL KCL++GM+R A++
Sbjct: 102 RKQRNRCQYCRLLKCLQMGMNRKAIR 127
>AL354979-4|CAI10960.1| 479|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 479
Score = 70.5 bits (165), Expect = 5e-12
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+++G+HYG+I+CEGCKGFF+RS Y+C R+K CV+ + Q
Sbjct: 60 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQ 108
Score = 45.2 bits (102), Expect = 2e-04
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVK 666
R RNRCQYCRL KCL++GM+R A++
Sbjct: 106 RKQRNRCQYCRLLKCLQMGMNRKAIR 131
>AL354928-2|CAI39633.1| 479|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 479
Score = 70.5 bits (165), Expect = 5e-12
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+++G+HYG+I+CEGCKGFF+RS Y+C R+K CV+ + Q
Sbjct: 60 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQ 108
Score = 45.2 bits (102), Expect = 2e-04
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVK 666
R RNRCQYCRL KCL++GM+R A++
Sbjct: 106 RKQRNRCQYCRLLKCLQMGMNRKAIR 131
>AL158075-1|CAI13577.1| 479|Homo sapiens nuclear receptor subfamily
6, group A, member 1 protein.
Length = 479
Score = 70.5 bits (165), Expect = 5e-12
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+++G+HYG+I+CEGCKGFF+RS Y+C R+K CV+ + Q
Sbjct: 60 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQ 108
Score = 45.2 bits (102), Expect = 2e-04
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVK 666
R RNRCQYCRL KCL++GM+R A++
Sbjct: 106 RKQRNRCQYCRLLKCLQMGMNRKAIR 131
>AF004291-1|AAC52054.1| 454|Homo sapiens germ cell nuclear factor
protein.
Length = 454
Score = 70.5 bits (165), Expect = 5e-12
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+++G+HYG+I+CEGCKGFF+RS Y+C R+K CV+ + Q
Sbjct: 34 CLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQ 82
Score = 45.2 bits (102), Expect = 2e-04
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVK 666
R RNRCQYCRL KCL++GM+R A++
Sbjct: 80 RKQRNRCQYCRLLKCLQMGMNRKAIR 105
>U64876-1|AAB06335.1| 480|Homo sapiens nuclear orphan receptor
protein.
Length = 480
Score = 70.1 bits (164), Expect = 7e-12
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+++G+HYG+I+CEGCKGFF+RS Y+C R+K CV+ + Q
Sbjct: 60 CLICGDRATGLHYGIISCEGCKGFFKRSICKKRVYRCSRDKNCVMSRKQ 108
Score = 45.2 bits (102), Expect = 2e-04
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVK 666
R RNRCQYCRL KCL++GM+R A++
Sbjct: 106 RKQRNRCQYCRLLKCLQMGMNRKAIR 131
>BC084544-1|AAH84544.2| 404|Homo sapiens nuclear receptor subfamily
2, group F, member 6 protein.
Length = 404
Score = 70.1 bits (164), Expect = 7e-12
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
+ C VCGDKSSG HYGV TCEGCK FF+RS ++Y C N+ C + Q
Sbjct: 54 VDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQ 102
Score = 47.6 bits (108), Expect = 4e-05
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +1
Query: 565 ATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
+ R D+ +RN+CQYCRL+KC ++GM ++AV+ GR+
Sbjct: 94 SNRDCQIDQHHRNQCQYCRLKKCFRVGMRKEAVQRGRI 131
>BC063018-1|AAH63018.2| 404|Homo sapiens nuclear receptor subfamily
2, group F, member 6 protein.
Length = 404
Score = 70.1 bits (164), Expect = 7e-12
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
+ C VCGDKSSG HYGV TCEGCK FF+RS ++Y C N+ C + Q
Sbjct: 54 VDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQ 102
Score = 47.6 bits (108), Expect = 4e-05
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +1
Query: 565 ATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
+ R D+ +RN+CQYCRL+KC ++GM ++AV+ GR+
Sbjct: 94 SNRDCQIDQHHRNQCQYCRLKKCFRVGMRKEAVQRGRI 131
>BC002669-1|AAH02669.3| 404|Homo sapiens nuclear receptor subfamily
2, group F, member 6 protein.
Length = 404
Score = 70.1 bits (164), Expect = 7e-12
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
+ C VCGDKSSG HYGV TCEGCK FF+RS ++Y C N+ C + Q
Sbjct: 54 VDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQ 102
Score = 47.6 bits (108), Expect = 4e-05
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +1
Query: 565 ATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
+ R D+ +RN+CQYCRL+KC ++GM ++AV+ GR+
Sbjct: 94 SNRDCQIDQHHRNQCQYCRLKKCFRVGMRKEAVQRGRI 131
>X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein
protein.
Length = 614
Score = 69.3 bits (162), Expect = 1e-11
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Frame = +3
Query: 405 KKAANSIRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACV 581
K +N + ++ CKVCGD +SG HYGV+ CEGCKGFFRRS + Y +C +N+ C
Sbjct: 117 KSTSNITKLNGMVLLCKVCGDVASGFHYGVLACEGCKGFFRRSIQQNIQYKRCLKNENCS 176
Query: 582 V 584
+
Sbjct: 177 I 177
Score = 60.5 bits (140), Expect = 6e-09
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
R+NRNRCQ CR +KCL +GMSRDAV+FGR+ K +++
Sbjct: 179 RINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQ 214
>X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor b
protein.
Length = 533
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 253
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 238 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 276
>X52773-1|CAA36982.1| 462|Homo sapiens protein ( Human mRNA for
retinoic acid receptor-like protein. ).
Length = 462
Score = 68.9 bits (161), Expect = 2e-11
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C++ + Q
Sbjct: 135 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQ 183
Score = 47.2 bits (107), Expect = 6e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
D+ RNRCQYCR QKCL +GM R+AV+ R R
Sbjct: 180 DKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDR 215
>X12794-1|CAA31282.1| 403|Homo sapiens protein ( Human v-erbA
related ear-2 gene. ).
Length = 403
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
+ C VCGDKSSG HYGV TCEGCK FF+R+ ++Y C N+ C + Q
Sbjct: 54 VDCVVCGDKSSGKHYGVFTCEGCKSFFKRTIRRNLSYTCRSNRDCQIDQ 102
Score = 47.6 bits (108), Expect = 4e-05
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +1
Query: 565 ATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
+ R D+ +RN+CQYCRL+KC ++GM ++AV+ GR+
Sbjct: 94 SNRDCQIDQHHRNQCQYCRLKKCFRVGMRKEAVQRGRI 131
>U60477-1|AAB09475.1| 414|Homo sapiens apoliprotein AI regulatory
protein-1 protein.
Length = 414
Score = 68.9 bits (161), Expect = 2e-11
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = +3
Query: 432 QIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
Q + I C VCGDKSSG HYG TCEGCK FF+RS ++Y C N+ C + Q
Sbjct: 73 QQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQ 125
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +1
Query: 565 ATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQ 690
A R D+ +RN+CQYCRL+KCLK+GM R+AV+ GRM Q
Sbjct: 117 ANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQ 158
>U10990-1|AAC50118.1| 596|Homo sapiens hTAK1 protein.
Length = 596
Score = 68.9 bits (161), Expect = 2e-11
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
C VCGDK+SG HYG ++CEGCKGFF+RS + Y C N+ C++ +
Sbjct: 117 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINK 163
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = +1
Query: 595 NRNRCQYCRLQKCLKLGMSRDAVKFGR 675
+RNRCQ+CRL+KCL++GM ++V+ R
Sbjct: 165 HRNRCQFCRLKKCLEMGMKMESVQSER 191
>M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta
protein.
Length = 533
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 253
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 238 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 276
>M64497-1|AAA86429.1| 414|Homo sapiens apolipoprotein AI regulatory
protein-1 protein.
Length = 414
Score = 68.9 bits (161), Expect = 2e-11
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = +3
Query: 432 QIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
Q + I C VCGDKSSG HYG TCEGCK FF+RS ++Y C N+ C + Q
Sbjct: 73 QQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQ 125
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +1
Query: 565 ATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQ 690
A R D+ +RN+CQYCRL+KCLK+GM R+AV+ GRM Q
Sbjct: 117 ANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQ 158
>M62760-1|AAA21479.1| 351|Homo sapiens ovalbumin upstream promoter
transcription factor II protein.
Length = 351
Score = 68.9 bits (161), Expect = 2e-11
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = +3
Query: 432 QIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
Q + I C VCGDKSSG HYG TCEGCK FF+RS ++Y C N+ C + Q
Sbjct: 73 QQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQ 125
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +1
Query: 565 ATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQ 690
A R D+ +RN+CQYCRL+KCLK+GM R+AV+ GRM Q
Sbjct: 117 ANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQ 158
>DQ303444-1|ABB96254.1| 452|Homo sapiens retinoid X receptor, alpha
protein.
Length = 452
Score = 68.9 bits (161), Expect = 2e-11
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C++ + Q
Sbjct: 125 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQ 173
Score = 47.2 bits (107), Expect = 6e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
D+ RNRCQYCR QKCL +GM R+AV+ R R
Sbjct: 170 DKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDR 205
>BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 253
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 238 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 276
>BC110998-1|AAI10999.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 68.9 bits (161), Expect = 2e-11
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C++ + Q
Sbjct: 135 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQ 183
Score = 47.2 bits (107), Expect = 6e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
D+ RNRCQYCR QKCL +GM R+AV+ R R
Sbjct: 180 DKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDR 215
>BC063827-1|AAH63827.1| 516|Homo sapiens RXRA protein protein.
Length = 516
Score = 68.9 bits (161), Expect = 2e-11
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C++ + Q
Sbjct: 189 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQ 237
Score = 47.2 bits (107), Expect = 6e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
D+ RNRCQYCR QKCL +GM R+AV+ R R
Sbjct: 234 DKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDR 269
>BC051670-1|AAH51670.1| 530|Homo sapiens NR2C2 protein protein.
Length = 530
Score = 68.9 bits (161), Expect = 2e-11
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
C VCGDK+SG HYG ++CEGCKGFF+RS + Y C N+ C++ +
Sbjct: 136 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINK 182
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = +1
Query: 595 NRNRCQYCRLQKCLKLGMSRDAVKFGR 675
+RNRCQ+CRL+KCL++GM ++V+ R
Sbjct: 184 HRNRCQFCRLKKCLEMGMKMESVQSKR 210
>BC042897-1|AAH42897.1| 414|Homo sapiens nuclear receptor subfamily
2, group F, member 2 protein.
Length = 414
Score = 68.9 bits (161), Expect = 2e-11
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = +3
Query: 432 QIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
Q + I C VCGDKSSG HYG TCEGCK FF+RS ++Y C N+ C + Q
Sbjct: 73 QQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQ 125
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +1
Query: 565 ATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQ 690
A R D+ +RN+CQYCRL+KCLK+GM R+AV+ GRM Q
Sbjct: 117 ANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQ 158
>BC014664-1|AAH14664.1| 414|Homo sapiens nuclear receptor subfamily
2, group F, member 2 protein.
Length = 414
Score = 68.9 bits (161), Expect = 2e-11
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = +3
Query: 432 QIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
Q + I C VCGDKSSG HYG TCEGCK FF+RS ++Y C N+ C + Q
Sbjct: 73 QQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQ 125
Score = 54.4 bits (125), Expect = 4e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +1
Query: 565 ATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQ 690
A R D+ +RN+CQYCRL+KCLK+GM R+AV+ GRM Q
Sbjct: 117 ANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQ 158
>BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 253
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 238 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 276
>AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 253
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 238 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 276
>AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 253
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 238 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 276
>AL669970-1|CAM45733.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 68.9 bits (161), Expect = 2e-11
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C++ + Q
Sbjct: 135 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQ 183
Score = 47.2 bits (107), Expect = 6e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
D+ RNRCQYCR QKCL +GM R+AV+ R R
Sbjct: 180 DKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDR 215
>AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 253
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 238 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 276
>AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 253
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 238 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 276
>AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 253
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 238 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 276
>AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 253
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 238 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 276
>AL354796-1|CAH70571.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 68.9 bits (161), Expect = 2e-11
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C++ + Q
Sbjct: 135 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQ 183
Score = 47.2 bits (107), Expect = 6e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
D+ RNRCQYCR QKCL +GM R+AV+ R R
Sbjct: 180 DKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDR 215
>AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, beta
protein.
Length = 482
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 154 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 202
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 187 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 225
>AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 253
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 238 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 276
>AL031228-12|CAI95621.1| 262|Homo sapiens retinoid X receptor, beta
protein.
Length = 262
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 176 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 224
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 209 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 247
>AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor beta
protein.
Length = 533
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 253
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 238 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 276
>AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B
protein.
Length = 533
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 205 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 253
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 238 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 276
>AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, beta
variant protein.
Length = 577
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C V + Q
Sbjct: 245 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ 293
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
T S + + D+ RNRCQYCR QKCL GM R+AV+
Sbjct: 278 TYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQ 316
>X16155-1|CAA34277.1| 418|Homo sapiens COUP-TF protein.
Length = 418
Score = 68.1 bits (159), Expect = 3e-11
Identities = 28/49 (57%), Positives = 32/49 (65%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
I C VCGDKSSG HYG TCEGCK FF+RS + Y C N+ C + Q
Sbjct: 79 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQ 127
Score = 54.8 bits (126), Expect = 3e-07
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQ 690
T + A R D+ +RN+CQYCRL+KCLK+GM R+AV+ GRM Q
Sbjct: 114 TYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQ 160
>X12795-1|CAA31283.1| 423|Homo sapiens protein ( Human v-erbA
related ear-3 gene. ).
Length = 423
Score = 68.1 bits (159), Expect = 3e-11
Identities = 28/49 (57%), Positives = 32/49 (65%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
I C VCGDKSSG HYG TCEGCK FF+RS + Y C N+ C + Q
Sbjct: 84 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQ 132
Score = 54.8 bits (126), Expect = 3e-07
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQ 690
T + A R D+ +RN+CQYCRL+KCLK+GM R+AV+ GRM Q
Sbjct: 119 TYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQ 165
>M29960-1|AAA36761.1| 603|Homo sapiens protein ( Human steroid
receptor (TR2-11) mRNA, complete cds. ).
Length = 603
Score = 68.1 bits (159), Expect = 3e-11
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
C VCGDK+SG HYG +TCEGCKGFF+RS + Y C +K C++ +
Sbjct: 113 CVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINK 159
Score = 43.6 bits (98), Expect = 7e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 595 NRNRCQYCRLQKCLKLGMSRDAVKFGR 675
+RNRCQYCRLQ+C+ GM +D+V+ R
Sbjct: 161 HRNRCQYCRLQRCIAFGMKQDSVQCER 187
>M29959-1|AAA36762.1| 467|Homo sapiens protein ( Human steroid
receptor (TR2-9) mRNA, complete cds. ).
Length = 467
Score = 68.1 bits (159), Expect = 3e-11
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
C VCGDK+SG HYG +TCEGCKGFF+RS + Y C +K C++ +
Sbjct: 113 CVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINK 159
Score = 43.6 bits (98), Expect = 7e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 595 NRNRCQYCRLQKCLKLGMSRDAVKFGR 675
+RNRCQYCRLQ+C+ GM +D+V+ R
Sbjct: 161 HRNRCQYCRLQRCIAFGMKQDSVQCER 187
>M21985-1|AAA36650.1| 483|Homo sapiens protein ( Human steroid
receptor TR2 mRNA, complete cds. ).
Length = 483
Score = 68.1 bits (159), Expect = 3e-11
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
C VCGDK+SG HYG +TCEGCKGFF+RS + Y C +K C++ +
Sbjct: 113 CVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINK 159
Score = 43.6 bits (98), Expect = 7e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 595 NRNRCQYCRLQKCLKLGMSRDAVKFGR 675
+RNRCQYCRLQ+C+ GM +D+V+ R
Sbjct: 161 HRNRCQYCRLQRCIAFGMKQDSVQCER 187
>BC040141-1|AAH40141.1| 467|Homo sapiens nuclear receptor subfamily
2, group C, member 1 protein.
Length = 467
Score = 68.1 bits (159), Expect = 3e-11
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
C VCGDK+SG HYG +TCEGCKGFF+RS + Y C +K C++ +
Sbjct: 113 CVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINK 159
Score = 43.6 bits (98), Expect = 7e-04
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 595 NRNRCQYCRLQKCLKLGMSRDAVKFGR 675
+RNRCQYCRLQ+C+ GM +D+V+ R
Sbjct: 161 HRNRCQYCRLQRCIAFGMKQDSVQCER 187
>BC017493-1|AAH17493.1| 423|Homo sapiens nuclear receptor subfamily
2, group F, member 1 protein.
Length = 423
Score = 68.1 bits (159), Expect = 3e-11
Identities = 28/49 (57%), Positives = 32/49 (65%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
I C VCGDKSSG HYG TCEGCK FF+RS + Y C N+ C + Q
Sbjct: 84 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQ 132
Score = 54.8 bits (126), Expect = 3e-07
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQ 690
T + A R D+ +RN+CQYCRL+KCLK+GM R+AV+ GRM Q
Sbjct: 119 TYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQ 165
>BC004154-1|AAH04154.1| 423|Homo sapiens nuclear receptor subfamily
2, group F, member 1 protein.
Length = 423
Score = 68.1 bits (159), Expect = 3e-11
Identities = 28/49 (57%), Positives = 32/49 (65%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
I C VCGDKSSG HYG TCEGCK FF+RS + Y C N+ C + Q
Sbjct: 84 IECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQ 132
Score = 54.8 bits (126), Expect = 3e-07
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQ 690
T + A R D+ +RN+CQYCRL+KCLK+GM R+AV+ GRM Q
Sbjct: 119 TYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQ 165
>U38480-1|AAA80681.1| 463|Homo sapiens retinoid X receptor-gamma
protein.
Length = 463
Score = 67.3 bits (157), Expect = 5e-11
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C++ + Q
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQ 187
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
D+ RNRCQYCR QKCL +GM R+AV+ R +R
Sbjct: 184 DKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRER 219
>M24898-1|AAA52335.1| 614|Homo sapiens triiodothyronine receptor
protein.
Length = 614
Score = 67.3 bits (157), Expect = 5e-11
Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +3
Query: 405 KKAANSIRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACV 581
K +N + ++ CKVCGD +SG HYGV CEGCKGFFRRS + Y +C +N+ C
Sbjct: 117 KSTSNITKLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCS 176
Query: 582 V 584
+
Sbjct: 177 I 177
Score = 60.5 bits (140), Expect = 6e-09
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
R+NRNRCQ CR +KCL +GMSRDAV+FGR+ K +++
Sbjct: 179 RINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQ 214
>CR456705-1|CAG32986.1| 463|Homo sapiens RXRG protein.
Length = 463
Score = 67.3 bits (157), Expect = 5e-11
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C++ + Q
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQ 187
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
D+ RNRCQYCR QKCL +GM R+AV+ R +R
Sbjct: 184 DKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRER 219
>BC056148-1|AAH56148.1| 614|Homo sapiens nuclear receptor subfamily
1, group D, member 1 protein.
Length = 614
Score = 67.3 bits (157), Expect = 5e-11
Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +3
Query: 405 KKAANSIRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACV 581
K +N + ++ CKVCGD +SG HYGV CEGCKGFFRRS + Y +C +N+ C
Sbjct: 117 KSTSNITKLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCS 176
Query: 582 V 584
+
Sbjct: 177 I 177
Score = 60.5 bits (140), Expect = 6e-09
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
R+NRNRCQ CR +KCL +GMSRDAV+FGR+ K +++
Sbjct: 179 RINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQ 214
>BC047875-1|AAH47875.1| 614|Homo sapiens nuclear receptor subfamily
1, group D, member 1 protein.
Length = 614
Score = 67.3 bits (157), Expect = 5e-11
Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +3
Query: 405 KKAANSIRAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACV 581
K +N + ++ CKVCGD +SG HYGV CEGCKGFFRRS + Y +C +N+ C
Sbjct: 117 KSTSNITKLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCS 176
Query: 582 V 584
+
Sbjct: 177 I 177
Score = 60.5 bits (140), Expect = 6e-09
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
R+NRNRCQ CR +KCL +GMSRDAV+FGR+ K +++
Sbjct: 179 RINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQ 214
>BC012063-1|AAH12063.1| 463|Homo sapiens retinoid X receptor, gamma
protein.
Length = 463
Score = 67.3 bits (157), Expect = 5e-11
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C++ + Q
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQ 187
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
D+ RNRCQYCR QKCL +GM R+AV+ R +R
Sbjct: 184 DKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRER 219
>AL160058-2|CAC00596.1| 463|Homo sapiens retinoid X receptor, gamma
protein.
Length = 463
Score = 67.3 bits (157), Expect = 5e-11
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQ 596
C +CGD+SSG HYGV +CEGCKGFF+R+ + Y C NK C++ + Q
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQ 187
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
D+ RNRCQYCR QKCL +GM R+AV+ R +R
Sbjct: 184 DKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRER 219
>L27586-1|AAA21474.1| 615|Homo sapiens TR4 orphan receptor protein.
Length = 615
Score = 66.9 bits (156), Expect = 7e-11
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQ 590
C VCGDK+SG HYG ++CEGCKGFF+RS + Y C ++ C++ +
Sbjct: 136 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSSQDCIINK 182
Score = 41.9 bits (94), Expect = 0.002
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +1
Query: 550 TTSVLATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGR 675
T S +++ ++ +RNRCQ+CRL+KCL++GM ++V+ R
Sbjct: 169 TYSCRSSQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSER 210
>U76388-1|AAB53105.1| 461|Homo sapiens steroidogenic factor 1
protein.
Length = 461
Score = 66.5 bits (155), Expect = 9e-11
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ +Y C +++C + + Q + P
Sbjct: 13 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Score = 41.5 bits (93), Expect = 0.003
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ R RC +CR QKCL +GM +AV+ RM
Sbjct: 58 DKTQRKRCPFCRFQKCLTVGMRLEAVRADRM 88
>BC032501-1|AAH32501.1| 461|Homo sapiens nuclear receptor subfamily
5, group A, member 1 protein.
Length = 461
Score = 66.5 bits (155), Expect = 9e-11
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ +Y C +++C + + Q + P
Sbjct: 13 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Score = 41.5 bits (93), Expect = 0.003
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ R RC +CR QKCL +GM +AV+ RM
Sbjct: 58 DKTQRKRCPFCRFQKCLTVGMRLEAVRADRM 88
>AY542548-1|AAS48621.1| 81|Homo sapiens nuclear receptor AdBP4
protein.
Length = 81
Score = 66.5 bits (155), Expect = 9e-11
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ +Y C +++C + + Q + P
Sbjct: 13 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Score = 35.1 bits (77), Expect = 0.24
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGM 648
D+ R RC +CR QKCL +GM
Sbjct: 58 DKTQRKRCPFCRFQKCLTVGM 78
>AL354979-3|CAI10959.1| 461|Homo sapiens nuclear receptor subfamily
5, group A, member 1 protein.
Length = 461
Score = 66.5 bits (155), Expect = 9e-11
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ +Y C +++C + + Q + P
Sbjct: 13 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Score = 41.5 bits (93), Expect = 0.003
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ R RC +CR QKCL +GM +AV+ RM
Sbjct: 58 DKTQRKRCPFCRFQKCLTVGMRLEAVRADRM 88
>AL354979-2|CAI10958.1| 178|Homo sapiens nuclear receptor subfamily
5, group A, member 1 protein.
Length = 178
Score = 66.5 bits (155), Expect = 9e-11
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ +Y C +++C + + Q + P
Sbjct: 13 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Score = 41.5 bits (93), Expect = 0.003
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ R RC +CR QKCL +GM +AV+ RM
Sbjct: 58 DKTQRKRCPFCRFQKCLTVGMRLEAVRADRM 88
>AL137846-2|CAI10872.1| 461|Homo sapiens nuclear receptor subfamily
5, group A, member 1 protein.
Length = 461
Score = 66.5 bits (155), Expect = 9e-11
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ +Y C +++C + + Q + P
Sbjct: 13 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCP 66
Score = 41.5 bits (93), Expect = 0.003
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ R RC +CR QKCL +GM +AV+ RM
Sbjct: 58 DKTQRKRCPFCRFQKCLTVGMRLEAVRADRM 88
>U93553-1|AAD03155.1| 500|Homo sapiens alpha1-fetoprotein
transcription factor protein.
Length = 500
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ Y C N+ C + + Q + P
Sbjct: 46 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 99
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ R RC YCR QKCL +GM +AV+ RM
Sbjct: 91 DKTQRKRCPYCRFQKCLSVGMKLEAVRADRM 121
>U80251-1|AAC78727.1| 495|Homo sapiens hepatocytic transcription
factor protein.
Length = 495
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ Y C N+ C + + Q + P
Sbjct: 40 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ R RC YCR QKCL +GM +AV+ RM
Sbjct: 85 DKTQRKRCPYCRFQKCLSVGMKLEAVRADRM 115
>D88155-1|BAA13546.1| 461|Homo sapiens AdBP4 protein.
Length = 461
Score = 66.1 bits (154), Expect = 1e-10
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ +Y C +++C + + Q P
Sbjct: 13 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRNRCP 66
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ RNRC +CR QKCL +GM +AV+ RM
Sbjct: 58 DKTQRNRCPFCRFQKCLTVGMRLEAVRADRM 88
>BC118652-1|AAI18653.1| 495|Homo sapiens nuclear receptor subfamily
5, group A, member 2 protein.
Length = 495
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ Y C N+ C + + Q + P
Sbjct: 40 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ R RC YCR QKCL +GM +AV+ RM
Sbjct: 85 DKTQRKRCPYCRFQKCLSVGMKLEAVRADRM 115
>BC118571-1|AAI18572.1| 495|Homo sapiens nuclear receptor subfamily
5, group A, member 2 protein.
Length = 495
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ Y C N+ C + + Q + P
Sbjct: 40 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ R RC YCR QKCL +GM +AV+ RM
Sbjct: 85 DKTQRKRCPYCRFQKCLSVGMKLEAVRADRM 115
>AF190464-2|AAG17124.1| 495|Homo sapiens hepatocytic transcription
factor B1F protein.
Length = 495
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ Y C N+ C + + Q + P
Sbjct: 40 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ R RC YCR QKCL +GM +AV+ RM
Sbjct: 85 DKTQRKRCPYCRFQKCLSVGMKLEAVRADRM 115
>AF190464-1|AAG17125.1| 541|Homo sapiens hepatocytic transcription
factor isoform B1F-2 protein.
Length = 541
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ Y C N+ C + + Q + P
Sbjct: 86 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ R RC YCR QKCL +GM +AV+ RM
Sbjct: 131 DKTQRKRCPYCRFQKCLSVGMKLEAVRADRM 161
>AF146343-1|AAD37378.1| 495|Homo sapiens CYP7A promoter binding
factor protein.
Length = 495
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ Y C N+ C + + Q + P
Sbjct: 40 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 93
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ R RC YCR QKCL +GM +AV+ RM
Sbjct: 85 DKTQRKRCPYCRFQKCLSVGMKLEAVRADRM 115
>AF124247-1|AAD26565.1| 541|Homo sapiens hepatocytic transcription
factor hB1F-2 protein.
Length = 541
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ Y C N+ C + + Q + P
Sbjct: 86 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ R RC YCR QKCL +GM +AV+ RM
Sbjct: 131 DKTQRKRCPYCRFQKCLSVGMKLEAVRADRM 161
>AF049102-1|AAD03248.1| 323|Homo sapiens alpha1-fetoprotein
transcription factor short variant protein.
Length = 323
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ Y C N+ C + + Q + P
Sbjct: 6 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 59
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ R RC YCR QKCL +GM +AV+ RM
Sbjct: 51 DKTQRKRCPYCRFQKCLSVGMKLEAVRADRM 81
>AB019246-1|BAA34092.1| 541|Homo sapiens FTZ-F1 related protein
protein.
Length = 541
Score = 66.1 bits (154), Expect = 1e-10
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
C VCGDK SG HYG++TCE CKGFF+R+ Y C N+ C + + Q + P
Sbjct: 86 CPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCP 139
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRM 678
D+ R RC YCR QKCL +GM +AV+ RM
Sbjct: 131 DKTQRKRCPYCRFQKCLSVGMKLEAVRADRM 161
>L31785-1|AAA65937.1| 579|Homo sapiens orphan nuclear hormone
receptor BD73 protein.
Length = 579
Score = 65.7 bits (153), Expect = 2e-10
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +3
Query: 441 IIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVV 584
++ CKVCGD +SG HYGV CEGCKGFFRRS + Y +C +N+ C +
Sbjct: 99 VLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSI 147
Score = 59.7 bits (138), Expect = 1e-08
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
R+NRNRCQ CR +KCL +GMSRDAV+FGR+ K +++
Sbjct: 149 RMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQ 184
>D16815-1|BAA20088.1| 579|Homo sapiens EAR-1r protein.
Length = 579
Score = 65.7 bits (153), Expect = 2e-10
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +3
Query: 441 IIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVV 584
++ CKVCGD +SG HYGV CEGCKGFFRRS + Y +C +N+ C +
Sbjct: 100 VLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSI 148
Score = 59.7 bits (138), Expect = 1e-08
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
R+NRNRCQ CR +KCL +GMSRDAV+FGR+ K +++
Sbjct: 150 RMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQ 185
>CR457434-1|CAG33715.1| 579|Homo sapiens NR1D2 protein.
Length = 579
Score = 65.7 bits (153), Expect = 2e-10
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +3
Query: 441 IIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVV 584
++ CKVCGD +SG HYGV CEGCKGFFRRS + Y +C +N+ C +
Sbjct: 100 VLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSI 148
Score = 59.7 bits (138), Expect = 1e-08
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
R+NRNRCQ CR +KCL +GMSRDAV+FGR+ K +++
Sbjct: 150 RMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQ 185
>BC070035-1|AAH70035.1| 408|Homo sapiens NR1D2 protein protein.
Length = 408
Score = 65.7 bits (153), Expect = 2e-10
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +3
Query: 441 IIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVV 584
++ CKVCGD +SG HYGV CEGCKGFFRRS + Y +C +N+ C +
Sbjct: 100 VLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSI 148
Score = 59.7 bits (138), Expect = 1e-08
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
R+NRNRCQ CR +KCL +GMSRDAV+FGR+ K +++
Sbjct: 150 RMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQ 185
>BC045613-1|AAH45613.1| 579|Homo sapiens nuclear receptor subfamily
1, group D, member 2 protein.
Length = 579
Score = 65.7 bits (153), Expect = 2e-10
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +3
Query: 441 IIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVV 584
++ CKVCGD +SG HYGV CEGCKGFFRRS + Y +C +N+ C +
Sbjct: 100 VLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSI 148
Score = 59.7 bits (138), Expect = 1e-08
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
R+NRNRCQ CR +KCL +GMSRDAV+FGR+ K +++
Sbjct: 150 RMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQ 185
>AB209091-1|BAD92328.1| 549|Homo sapiens Orphan nuclear receptor
NR1D2 variant protein.
Length = 549
Score = 65.7 bits (153), Expect = 2e-10
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +3
Query: 441 IIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVV 584
++ CKVCGD +SG HYGV CEGCKGFFRRS + Y +C +N+ C +
Sbjct: 69 VLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSI 117
Score = 59.7 bits (138), Expect = 1e-08
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
R+NRNRCQ CR +KCL +GMSRDAV+FGR+ K +++
Sbjct: 119 RMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQ 154
>EF614253-1|ABR09276.1| 473|Homo sapiens nuclear receptor subfamily
1, group I, member 2 protein.
Length = 473
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCP-RNKACVV 584
C+VCGDK++G H+ V+TCEGCKGFFRR+ +CP R AC +
Sbjct: 80 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEI 125
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
R R +CQ CRL+KCL+ GM ++ +
Sbjct: 127 RKTRRQCQACRLRKCLESGMKKEMI 151
>DQ923326-1|ABJ52966.1| 397|Homo sapiens orphan nuclear receptor
protein.
Length = 397
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCP-RNKACVV 584
C+VCGDK++G H+ V+TCEGCKGFFRR+ +CP R AC +
Sbjct: 41 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEI 86
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
R R +CQ CRL+KCL+ GM ++ +
Sbjct: 88 RKTRRQCQACRLRKCLESGMKKEMI 112
>DQ911122-1|ABJ52965.1| 434|Homo sapiens orphan nuclear receptor
protein.
Length = 434
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCP-RNKACVV 584
C+VCGDK++G H+ V+TCEGCKGFFRR+ +CP R AC +
Sbjct: 41 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEI 86
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
R R +CQ CRL+KCL+ GM ++ +
Sbjct: 88 RKTRRQCQACRLRKCLESGMKKEMI 112
>BC017304-1|AAH17304.2| 433|Homo sapiens NR1I2 protein protein.
Length = 433
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCP-RNKACVV 584
C+VCGDK++G H+ V+TCEGCKGFFRR+ +CP R AC +
Sbjct: 41 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEI 86
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
R R +CQ CRL+KCL+ GM ++ +
Sbjct: 88 RKTRRQCQACRLRKCLESGMKKEMI 112
>AY091855-1|AAM26736.1| 434|Homo sapiens steroid and xenobiotic
sensing nuclear receptor SXR protein.
Length = 434
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCP-RNKACVV 584
C+VCGDK++G H+ V+TCEGCKGFFRR+ +CP R AC +
Sbjct: 41 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEI 86
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
R R +CQ CRL+KCL+ GM ++ +
Sbjct: 88 RKTRRQCQACRLRKCLESGMKKEMI 112
>AJ009937-2|CAB55493.1| 420|Homo sapiens nuclear hormone receptor
PRR2-C protein.
Length = 420
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCP-RNKACVV 584
C+VCGDK++G H+ V+TCEGCKGFFRR+ +CP R AC +
Sbjct: 64 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEI 109
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
R R +CQ CRL+KCL+ GM + +
Sbjct: 111 RKTRRQCQACRLRKCLESGMKNEMI 135
>AJ009937-1|CAB55492.1| 397|Homo sapiens nuclear hormone receptor
PRR2-A protein.
Length = 397
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCP-RNKACVV 584
C+VCGDK++G H+ V+TCEGCKGFFRR+ +CP R AC +
Sbjct: 41 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEI 86
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
R R +CQ CRL+KCL+ GM + +
Sbjct: 88 RKTRRQCQACRLRKCLESGMKNEMI 112
>AJ009936-2|CAB55490.1| 457|Homo sapiens nuclear hormone receptor
PRR1-C protein.
Length = 457
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCP-RNKACVV 584
C+VCGDK++G H+ V+TCEGCKGFFRR+ +CP R AC +
Sbjct: 64 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEI 109
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
R R +CQ CRL+KCL+ GM + +
Sbjct: 111 RKTRRQCQACRLRKCLESGMKNEMI 135
>AJ009936-1|CAB55489.1| 434|Homo sapiens nuclear hormone receptor
PRR1-A protein.
Length = 434
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCP-RNKACVV 584
C+VCGDK++G H+ V+TCEGCKGFFRR+ +CP R AC +
Sbjct: 41 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEI 86
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
R R +CQ CRL+KCL+ GM + +
Sbjct: 88 RKTRRQCQACRLRKCLESGMKNEMI 112
>AF364606-3|AAK38721.1| 397|Homo sapiens orphan nuclear receptor
PXR.2 protein.
Length = 397
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCP-RNKACVV 584
C+VCGDK++G H+ V+TCEGCKGFFRR+ +CP R AC +
Sbjct: 41 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEI 86
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
R R +CQ CRL+KCL+ GM ++ +
Sbjct: 88 RKTRRQCQACRLRKCLESGMKKEMI 112
>AF364606-2|AAK38720.1| 434|Homo sapiens orphan nuclear receptor
PXR.1 protein.
Length = 434
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCP-RNKACVV 584
C+VCGDK++G H+ V+TCEGCKGFFRR+ +CP R AC +
Sbjct: 41 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEI 86
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
R R +CQ CRL+KCL+ GM ++ +
Sbjct: 88 RKTRRQCQACRLRKCLESGMKKEMI 112
>AF364606-1|AAK38722.1| 473|Homo sapiens orphan nuclear receptor
PAR2 protein.
Length = 473
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCP-RNKACVV 584
C+VCGDK++G H+ V+TCEGCKGFFRR+ +CP R AC +
Sbjct: 80 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEI 125
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
R R +CQ CRL+KCL+ GM ++ +
Sbjct: 127 RKTRRQCQACRLRKCLESGMKKEMI 151
>AF084645-1|AAC64558.1| 434|Homo sapiens orphan nuclear receptor
protein.
Length = 434
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCP-RNKACVV 584
C+VCGDK++G H+ V+TCEGCKGFFRR+ +CP R AC +
Sbjct: 41 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEI 86
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
R R +CQ CRL+KCL+ GM ++ +
Sbjct: 88 RKTRRQCQACRLRKCLESGMKKEMI 112
>AF084644-1|AAC64557.1| 473|Homo sapiens orphan nuclear receptor
protein.
Length = 473
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCP-RNKACVV 584
C+VCGDK++G H+ V+TCEGCKGFFRR+ +CP R AC +
Sbjct: 80 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEI 125
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
R R +CQ CRL+KCL+ GM ++ +
Sbjct: 127 RKTRRQCQACRLRKCLESGMKKEMI 151
>AF061056-1|AAD05436.1| 434|Homo sapiens orphan nuclear receptor
PXR protein.
Length = 434
Score = 64.5 bits (150), Expect = 3e-10
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCP-RNKACVV 584
C+VCGDK++G H+ V+TCEGCKGFFRR+ +CP R AC +
Sbjct: 41 CRVCGDKATGYHFNVMTCEGCKGFFRRAMKRNARLRCPFRKGACEI 86
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
R R +CQ CRL+KCL+ GM ++ +
Sbjct: 88 RKTRRQCQACRLRKCLESGMKKEMI 112
>Z30425-1|CAA83016.1| 348|Homo sapiens orphan nuclear hormone
receptor protein.
Length = 348
Score = 64.1 bits (149), Expect = 5e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 438 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
E+ C VCGD+++G H+ +TCEGCKGFFRR+ S + CP +C V + Q + P
Sbjct: 7 ELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCP 64
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
+ R C CRLQKCL GM +D +
Sbjct: 57 KTQRRHCPACRLQKCLDAGMRKDMI 81
>U68233-1|AAB08107.1| 472|Homo sapiens farnesol receptor HRR-1
protein.
Length = 472
Score = 64.1 bits (149), Expect = 5e-10
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD++SG HY +TCEGCKGFFRRS + Y+C CV+
Sbjct: 127 CVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVM 171
Score = 30.7 bits (66), Expect = 5.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGM 648
D R +CQ CRL+KC ++GM
Sbjct: 172 DMYMRRKCQECRLRKCKEMGM 192
>DQ022681-1|AAY56401.1| 357|Homo sapiens nuclear receptor subfamily
1, group I, member 3 protein.
Length = 357
Score = 64.1 bits (149), Expect = 5e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 438 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
E+ C VCGD+++G H+ +TCEGCKGFFRR+ S + CP +C V + Q + P
Sbjct: 7 ELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCP 64
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
+ R C CRLQKCL GM +D +
Sbjct: 57 KTQRRHCPACRLQKCLDAGMRKDMI 81
>BC130573-1|AAI30574.1| 476|Homo sapiens NR1H4 protein protein.
Length = 476
Score = 64.1 bits (149), Expect = 5e-10
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD++SG HY +TCEGCKGFFRRS + Y+C CV+
Sbjct: 127 CVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVM 171
Score = 33.9 bits (74), Expect = 0.56
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQ 690
D R +CQ CRL+KC ++GM + + G +++ Q
Sbjct: 172 DMYMRRKCQECRLRKCKEMGMLAECMYTGLLTEIQ 206
>BC121121-1|AAI21122.1| 309|Homo sapiens nuclear receptor subfamily
1, group I, member 3 protein.
Length = 309
Score = 64.1 bits (149), Expect = 5e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 438 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
E+ C VCGD+++G H+ +TCEGCKGFFRR+ S + CP +C V + Q + P
Sbjct: 7 ELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCP 64
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
+ R C CRLQKCL GM +D +
Sbjct: 57 KTQRRHCPACRLQKCLDAGMRKDMI 81
>BC121120-1|AAI21121.1| 314|Homo sapiens nuclear receptor subfamily
1, group I, member 3 protein.
Length = 314
Score = 64.1 bits (149), Expect = 5e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 438 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
E+ C VCGD+++G H+ +TCEGCKGFFRR+ S + CP +C V + Q + P
Sbjct: 7 ELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCP 64
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
+ R C CRLQKCL GM +D +
Sbjct: 57 KTQRRHCPACRLQKCLDAGMRKDMI 81
>BC071778-1|AAH71778.1| 475|Homo sapiens NR1H4 protein protein.
Length = 475
Score = 64.1 bits (149), Expect = 5e-10
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD++SG HY +TCEGCKGFFRRS + Y+C CV+
Sbjct: 126 CVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVM 170
Score = 33.9 bits (74), Expect = 0.56
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQ 690
D R +CQ CRL+KC ++GM + + G +++ Q
Sbjct: 171 DMYMRRKCQECRLRKCKEMGMLAECMYTGLLTEIQ 205
>BC069626-1|AAH69626.1| 352|Homo sapiens nuclear receptor subfamily
1, group I, member 3 protein.
Length = 352
Score = 64.1 bits (149), Expect = 5e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 438 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
E+ C VCGD+++G H+ +TCEGCKGFFRR+ S + CP +C V + Q + P
Sbjct: 7 ELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCP 64
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
+ R C CRLQKCL GM +D +
Sbjct: 57 KTQRRHCPACRLQKCLDAGMRKDMI 81
>AY572826-1|AAT47179.1| 119|Homo sapiens constitutive androstane
receptor SV21 protein.
Length = 119
Score = 64.1 bits (149), Expect = 5e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 438 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
E+ C VCGD+++G H+ +TCEGCKGFFRR+ S + CP +C V + Q + P
Sbjct: 7 ELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCP 64
Score = 32.3 bits (70), Expect = 1.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRD 657
+ R C CRLQKCL GM +D
Sbjct: 57 KTQRRHCPACRLQKCLDAGMRKD 79
>AY572823-1|AAT47176.1| 147|Homo sapiens constitutive androstane
receptor SV18 protein.
Length = 147
Score = 64.1 bits (149), Expect = 5e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 438 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
E+ C VCGD+++G H+ +TCEGCKGFFRR+ S + CP +C V + Q + P
Sbjct: 7 ELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCP 64
Score = 32.3 bits (70), Expect = 1.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRD 657
+ R C CRLQKCL GM +D
Sbjct: 57 KTQRRHCPACRLQKCLDAGMRKD 79
>AY572822-1|AAT47175.1| 147|Homo sapiens constitutive androstane
receptor SV17 protein.
Length = 147
Score = 64.1 bits (149), Expect = 5e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 438 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
E+ C VCGD+++G H+ +TCEGCKGFFRR+ S + CP +C V + Q + P
Sbjct: 7 ELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCP 64
Score = 32.3 bits (70), Expect = 1.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRD 657
+ R C CRLQKCL GM +D
Sbjct: 57 KTQRRHCPACRLQKCLDAGMRKD 79
>AY572819-1|AAT47172.1| 321|Homo sapiens constitutive androstane
receptor SV14 protein.
Length = 321
Score = 64.1 bits (149), Expect = 5e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 438 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
E+ C VCGD+++G H+ +TCEGCKGFFRR+ S + CP +C V + Q + P
Sbjct: 7 ELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCP 64
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
+ R C CRLQKCL GM +D +
Sbjct: 57 KTQRRHCPACRLQKCLDAGMRKDMI 81
>AY572813-1|AAT47166.1| 278|Homo sapiens constitutive androstane
receptor SV8 protein.
Length = 278
Score = 64.1 bits (149), Expect = 5e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 438 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
E+ C VCGD+++G H+ +TCEGCKGFFRR+ S + CP +C V + Q + P
Sbjct: 7 ELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCP 64
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
+ R C CRLQKCL GM +D +
Sbjct: 57 KTQRRHCPACRLQKCLDAGMRKDMI 81
>AY572810-1|AAT47163.1| 309|Homo sapiens constitutive androstane
receptor SV5 protein.
Length = 309
Score = 64.1 bits (149), Expect = 5e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 438 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
E+ C VCGD+++G H+ +TCEGCKGFFRR+ S + CP +C V + Q + P
Sbjct: 7 ELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCP 64
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
+ R C CRLQKCL GM +D +
Sbjct: 57 KTQRRHCPACRLQKCLDAGMRKDMI 81
>AY572806-1|AAT47159.1| 322|Homo sapiens constitutive androstane
receptor SV1 protein.
Length = 322
Score = 64.1 bits (149), Expect = 5e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 438 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
E+ C VCGD+++G H+ +TCEGCKGFFRR+ S + CP +C V + Q + P
Sbjct: 7 ELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCP 64
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
+ R C CRLQKCL GM +D +
Sbjct: 57 KTQRRHCPACRLQKCLDAGMRKDMI 81
>AL590714-14|CAH72154.1| 348|Homo sapiens nuclear receptor
subfamily 1, group I, member 3 protein.
Length = 348
Score = 64.1 bits (149), Expect = 5e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 438 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
E+ C VCGD+++G H+ +TCEGCKGFFRR+ S + CP +C V + Q + P
Sbjct: 7 ELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCP 64
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
+ R C CRLQKCL GM +D +
Sbjct: 57 KTQRRHCPACRLQKCLDAGMRKDMI 81
>AL590714-13|CAH72153.1| 352|Homo sapiens nuclear receptor
subfamily 1, group I, member 3 protein.
Length = 352
Score = 64.1 bits (149), Expect = 5e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 438 EIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQPMP 611
E+ C VCGD+++G H+ +TCEGCKGFFRR+ S + CP +C V + Q + P
Sbjct: 7 ELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCP 64
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 589 RVNRNRCQYCRLQKCLKLGMSRDAV 663
+ R C CRLQKCL GM +D +
Sbjct: 57 KTQRRHCPACRLQKCLDAGMRKDMI 81
>AF478446-1|AAM53551.1| 486|Homo sapiens farnesoid-X-receptor beta
splice variant 2 protein.
Length = 486
Score = 64.1 bits (149), Expect = 5e-10
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD++SG HY +TCEGCKGFFRRS + Y+C CV+
Sbjct: 137 CVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVM 181
Score = 33.9 bits (74), Expect = 0.56
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQ 690
D R +CQ CRL+KC ++GM + + G +++ Q
Sbjct: 182 DMYMRRKCQECRLRKCKEMGMLAECMYTGLLTEIQ 216
>AF478445-1|AAM53550.1| 482|Homo sapiens farnesoid-X-receptor beta
splice variant 1 protein.
Length = 482
Score = 64.1 bits (149), Expect = 5e-10
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD++SG HY +TCEGCKGFFRRS + Y+C CV+
Sbjct: 137 CVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVM 181
Score = 30.7 bits (66), Expect = 5.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGM 648
D R +CQ CRL+KC ++GM
Sbjct: 182 DMYMRRKCQECRLRKCKEMGM 202
>AF384555-1|AAK60271.1| 476|Homo sapiens farnesol receptor protein.
Length = 476
Score = 64.1 bits (149), Expect = 5e-10
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD++SG HY +TCEGCKGFFRRS + Y+C CV+
Sbjct: 127 CVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVM 171
Score = 33.9 bits (74), Expect = 0.56
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQ 690
D R +CQ CRL+KC ++GM + + G +++ Q
Sbjct: 172 DMYMRRKCQECRLRKCKEMGMLAECMYTGLLTEIQ 206
>Y13276-1|CAA73725.1| 385|Homo sapiens Tailless protein protein.
Length = 385
Score = 62.9 bits (146), Expect = 1e-09
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQC 560
IPCKVCGD+SSG HYGV C+GC GFF+RS Y C
Sbjct: 14 IPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVC 52
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGR 675
D+ +RN+C+ CRL+KCL++ M++DAV+ R
Sbjct: 63 DKTHRNQCRACRLKKCLEVNMNKDAVQHER 92
>BC028031-1|AAH28031.1| 385|Homo sapiens nuclear receptor subfamily
2, group E, member 1 protein.
Length = 385
Score = 62.9 bits (146), Expect = 1e-09
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQC 560
IPCKVCGD+SSG HYGV C+GC GFF+RS Y C
Sbjct: 14 IPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVC 52
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGR 675
D+ +RN+C+ CRL+KCL++ M++DAV+ R
Sbjct: 63 DKTHRNQCRACRLKKCLEVNMNKDAVQHER 92
>AL078596-2|CAO03480.1| 422|Homo sapiens nuclear receptor subfamily
2, group E, member 1 protein.
Length = 422
Score = 62.9 bits (146), Expect = 1e-09
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQC 560
IPCKVCGD+SSG HYGV C+GC GFF+RS Y C
Sbjct: 51 IPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVC 89
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGR 675
D+ +RN+C+ CRL+KCL++ M++DAV+ R
Sbjct: 100 DKTHRNQCRACRLKKCLEVNMNKDAVQHER 129
>AL078596-1|CAB75626.1| 385|Homo sapiens nuclear receptor subfamily
2, group E, member 1 protein.
Length = 385
Score = 62.9 bits (146), Expect = 1e-09
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQC 560
IPCKVCGD+SSG HYGV C+GC GFF+RS Y C
Sbjct: 14 IPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVC 52
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGR 675
D+ +RN+C+ CRL+KCL++ M++DAV+ R
Sbjct: 63 DKTHRNQCRACRLKKCLEVNMNKDAVQHER 92
>AK131541-1|BAD18677.1| 422|Homo sapiens protein ( Homo sapiens
cDNA FLJ16774 fis, clone BRCAN2019772, highly similar
to Orphan nuclear receptor NR2E1. ).
Length = 422
Score = 62.9 bits (146), Expect = 1e-09
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQC 560
IPCKVCGD+SSG HYGV C+GC GFF+RS Y C
Sbjct: 51 IPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVC 89
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGR 675
D+ +RN+C+ CRL+KCL++ M++DAV+ R
Sbjct: 100 DKTHRNQCRACRLKKCLEVNMNKDAVQHER 129
>AF411525-1|AAL05871.1| 385|Homo sapiens nuclear receptor subfamily
2 group E member 1 protein.
Length = 385
Score = 62.9 bits (146), Expect = 1e-09
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQC 560
IPCKVCGD+SSG HYGV C+GC GFF+RS Y C
Sbjct: 14 IPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVC 52
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGR 675
D+ +RN+C+ CRL+KCL++ M++DAV+ R
Sbjct: 63 DKTHRNQCRACRLKKCLEVNMNKDAVQHER 92
>AF220532-1|AAG31945.1| 385|Homo sapiens orphan nuclear receptor
protein.
Length = 385
Score = 62.9 bits (146), Expect = 1e-09
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = +3
Query: 444 IPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQC 560
IPCKVCGD+SSG HYGV C+GC GFF+RS Y C
Sbjct: 14 IPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVC 52
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/30 (50%), Positives = 25/30 (83%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGR 675
D+ +RN+C+ CRL+KCL++ M++DAV+ R
Sbjct: 63 DKTHRNQCRACRLKKCLEVNMNKDAVQHER 92
>X51730-1|CAA36018.1| 933|Homo sapiens protein ( Human mRNA and
promoter DNA for progesterone receptor. ).
Length = 933
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 402 DKKAANSIRAQIEIIP---CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNK 572
D +A+ S + E +P C +CGD++SG HYGV+TC CK FF+R+ NY C
Sbjct: 548 DSEASQSPQYSFESLPQKICLICGDEASGCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN 607
Query: 573 ACVV 584
C+V
Sbjct: 608 DCIV 611
Score = 33.9 bits (74), Expect = 0.56
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
D++ R C CRL+KC + GM KF + +K
Sbjct: 612 DKIRRKNCPACRLRKCCQAGMVLGGRKFKKFNK 644
>U22662-1|AAA85856.1| 447|Homo sapiens nuclear orphan receptor
LXR-alpha protein.
Length = 447
Score = 62.5 bits (145), Expect = 1e-09
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKAC 578
C VCGDK+SG HY V++CEGCKGFFRRS +Y C C
Sbjct: 98 CSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGHC 140
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D R +CQ CRL+KC + GM + V
Sbjct: 143 DTYMRRKCQECRLRKCRQAGMREECV 168
>M15716-1|AAA60081.1| 933|Homo sapiens progesterone receptor
protein.
Length = 933
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 402 DKKAANSIRAQIEIIP---CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNK 572
D +A+ S + E +P C +CGD++SG HYGV+TC CK FF+R+ NY C
Sbjct: 548 DSEASQSPQYSFESLPQKICLICGDEASGCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN 607
Query: 573 ACVV 584
C+V
Sbjct: 608 DCIV 611
Score = 33.9 bits (74), Expect = 0.56
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
D++ R C CRL+KC + GM KF + +K
Sbjct: 612 DKIRRKNCPACRLRKCCQAGMVLGGRKFKKFNK 644
>BT019411-1|AAV38218.1| 447|Homo sapiens nuclear receptor subfamily
1, group H, member 3 protein.
Length = 447
Score = 62.5 bits (145), Expect = 1e-09
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKAC 578
C VCGDK+SG HY V++CEGCKGFFRRS +Y C C
Sbjct: 98 CSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGHC 140
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D R +CQ CRL+KC + GM + V
Sbjct: 143 DTYMRRKCQECRLRKCRQAGMREECV 168
>BC041172-1|AAH41172.1| 402|Homo sapiens NR1H3 protein protein.
Length = 402
Score = 62.5 bits (145), Expect = 1e-09
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKAC 578
C VCGDK+SG HY V++CEGCKGFFRRS +Y C C
Sbjct: 53 CSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGHC 95
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D R +CQ CRL+KC + GM + V
Sbjct: 98 DTYMRRKCQECRLRKCRQAGMREECV 123
>BC008819-1|AAH08819.1| 387|Homo sapiens NR1H3 protein protein.
Length = 387
Score = 62.5 bits (145), Expect = 1e-09
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKAC 578
C VCGDK+SG HY V++CEGCKGFFRRS +Y C C
Sbjct: 98 CSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGHC 140
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D R +CQ CRL+KC + GM + V
Sbjct: 143 DTYMRRKCQECRLRKCRQAGMREECV 168
>AY525610-1|AAS00096.1| 933|Homo sapiens progesterone receptor
protein.
Length = 933
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 402 DKKAANSIRAQIEIIP---CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNK 572
D +A+ S + E +P C +CGD++SG HYGV+TC CK FF+R+ NY C
Sbjct: 548 DSEASQSPQYSFESLPQKICLICGDEASGCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN 607
Query: 573 ACVV 584
C+V
Sbjct: 608 DCIV 611
Score = 33.9 bits (74), Expect = 0.56
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
D++ R C CRL+KC + GM KF + +K
Sbjct: 612 DKIRRKNCPACRLRKCCQAGMVLGGRKFKKFNK 644
>AY382151-1|AAQ96833.1| 255|Homo sapiens progesterone receptor
protein.
Length = 255
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 402 DKKAANSIRAQIEIIP---CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNK 572
D +A+ S + E +P C +CGD++SG HYGV+TC CK FF+R+ NY C
Sbjct: 1 DSEASQSPQYSFESLPQKICLICGDEASGCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN 60
Query: 573 ACVV 584
C+V
Sbjct: 61 DCIV 64
Score = 33.9 bits (74), Expect = 0.56
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
D++ R C CRL+KC + GM KF + +K
Sbjct: 65 DKIRRKNCPACRLRKCCQAGMVLGGRKFKKFNK 97
>AF016381-1|AAD01587.1| 933|Homo sapiens progesterone receptor
protein.
Length = 933
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 402 DKKAANSIRAQIEIIP---CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNK 572
D +A+ S + E +P C +CGD++SG HYGV+TC CK FF+R+ NY C
Sbjct: 548 DSEASQSPQYSFESLPQKICLICGDEASGCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN 607
Query: 573 ACVV 584
C+V
Sbjct: 608 DCIV 611
Score = 33.9 bits (74), Expect = 0.56
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
D++ R C CRL+KC + GM KF + +K
Sbjct: 612 DKIRRKNCPACRLRKCCQAGMVLGGRKFKKFNK 644
>AB085845-1|BAC11013.1| 803|Homo sapiens delta 6/2 progesterone
receptor protein.
Length = 803
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 402 DKKAANSIRAQIEIIP---CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNK 572
D +A+ S + E +P C +CGD++SG HYGV+TC CK FF+R+ NY C
Sbjct: 548 DSEASQSPQYSFESLPQKICLICGDEASGCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN 607
Query: 573 ACVV 584
C+V
Sbjct: 608 DCIV 611
Score = 33.9 bits (74), Expect = 0.56
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK 684
D++ R C CRL+KC + GM KF + +K
Sbjct: 612 DKIRRKNCPACRLRKCCQAGMVLGGRKFKKFNK 644
>AB085844-1|BAC11012.1| 690|Homo sapiens delta4+6/2 progesterone
receptor protein.
Length = 690
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 402 DKKAANSIRAQIEIIP---CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNK 572
D +A+ S + E +P C +CGD++SG HYGV+TC CK FF+R+ NY C
Sbjct: 548 DSEASQSPQYSFESLPQKICLICGDEASGCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN 607
Query: 573 ACVV 584
C+V
Sbjct: 608 DCIV 611
Score = 30.3 bits (65), Expect = 6.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGM 648
D++ R C CRL+KC + GM
Sbjct: 612 DKIRRKNCPACRLRKCCQAGM 632
>AB085683-1|BAC06585.1| 695|Homo sapiens Progesterone receptor
protein.
Length = 695
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 402 DKKAANSIRAQIEIIP---CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNK 572
D +A+ S + E +P C +CGD++SG HYGV+TC CK FF+R+ NY C
Sbjct: 548 DSEASQSPQYSFESLPQKICLICGDEASGCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN 607
Query: 573 ACVV 584
C+V
Sbjct: 608 DCIV 611
Score = 30.3 bits (65), Expect = 6.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGM 648
D++ R C CRL+KC + GM
Sbjct: 612 DKIRRKNCPACRLRKCCQAGM 632
>AB084248-1|BAB91074.1| 831|Homo sapiens delta 4 progesterone
receptor protein.
Length = 831
Score = 62.5 bits (145), Expect = 1e-09
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +3
Query: 402 DKKAANSIRAQIEIIP---CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNK 572
D +A+ S + E +P C +CGD++SG HYGV+TC CK FF+R+ NY C
Sbjct: 548 DSEASQSPQYSFESLPQKICLICGDEASGCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRN 607
Query: 573 ACVV 584
C+V
Sbjct: 608 DCIV 611
Score = 30.3 bits (65), Expect = 6.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGM 648
D++ R C CRL+KC + GM
Sbjct: 612 DKIRRKNCPACRLRKCCQAGM 632
>Z49826-1|CAA89990.2| 408|Homo sapiens hepatocyte nuclear factor 4
gamma (HNF4gamma) protein.
Length = 408
Score = 62.1 bits (144), Expect = 2e-09
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG TC+GCKGFFRRS Y C ++ CVV
Sbjct: 12 CAICGDRATGKHYGASTCDGCKGFFRRSIRKSHIYSCRFSRQCVV 56
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ RN+C+YCRL+KC + GM ++AV+
Sbjct: 57 DKDKRNQCRYCRLRKCFRAGMKKEAVQ 83
>X67482-1|CAA47824.1| 427|Homo sapiens HL-60 1,25-dihydroxyvitamin
D-3 receptor protein.
Length = 427
Score = 62.1 bits (144), Expect = 2e-09
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKAC 578
C VCGD+++G H+ +TCEGCKGFFRRS + CP N C
Sbjct: 24 CGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDC 66
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 595 NRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
NR CQ CRL++C+ +GM ++ + + +RE
Sbjct: 72 NRRHCQACRLKRCVDIGMMKEFILTDEEVQRKRE 105
>M65208-1|AAA61274.1| 67|Homo sapiens vitamin D receptor protein.
Length = 67
Score = 62.1 bits (144), Expect = 2e-09
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKAC 578
C VCGD+++G H+ +TCEGCKGFFRRS + CP N C
Sbjct: 1 CGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDC 43
Score = 30.7 bits (66), Expect = 5.2
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 595 NRNRCQYCRLQKCLKLGM 648
NR CQ CRL++C+ +GM
Sbjct: 49 NRRHCQACRLKRCVDIGM 66
>J03258-1|AAA61273.1| 427|Homo sapiens VDR protein.
Length = 427
Score = 62.1 bits (144), Expect = 2e-09
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKAC 578
C VCGD+++G H+ +TCEGCKGFFRRS + CP N C
Sbjct: 24 CGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDC 66
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 595 NRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
NR CQ CRL++C+ +GM ++ + + +RE
Sbjct: 72 NRRHCQACRLKRCVDIGMMKEFILTDEEVQRKRE 105
>BC060832-1|AAH60832.1| 427|Homo sapiens VDR protein protein.
Length = 427
Score = 62.1 bits (144), Expect = 2e-09
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKAC 578
C VCGD+++G H+ +TCEGCKGFFRRS + CP N C
Sbjct: 24 CGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDC 66
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 595 NRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
NR CQ CRL++C+ +GM ++ + + +RE
Sbjct: 72 NRRHCQACRLKRCVDIGMMKEFILTDEEVQRKRE 105
>AY342401-1|AAP88938.1| 424|Homo sapiens vitamin D
(1,25-dihydroxyvitamin D3) receptor protein.
Length = 424
Score = 62.1 bits (144), Expect = 2e-09
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKAC 578
C VCGD+++G H+ +TCEGCKGFFRRS + CP N C
Sbjct: 21 CGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDC 63
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 595 NRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
NR CQ CRL++C+ +GM ++ + + +RE
Sbjct: 69 NRRHCQACRLKRCVDIGMMKEFILTDEEVQRKRE 102
>AF133504-1|AAF00110.1| 408|Homo sapiens hepatocyte nuclear factor
4 gamma protein.
Length = 408
Score = 62.1 bits (144), Expect = 2e-09
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG TC+GCKGFFRRS Y C ++ CVV
Sbjct: 12 CAICGDRATGKHYGASTCDGCKGFFRRSIRKSHIYSCRFSRQCVV 56
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ RN+C+YCRL+KC + GM ++AV+
Sbjct: 57 DKDKRNQCRYCRLRKCFRAGMKKEAVQ 83
>AF026260-1|AAB95155.1| 427|Homo sapiens vitamin D receptor
protein.
Length = 427
Score = 62.1 bits (144), Expect = 2e-09
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKAC 578
C VCGD+++G H+ +TCEGCKGFFRRS + CP N C
Sbjct: 24 CGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDC 66
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 595 NRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
NR CQ CRL++C+ +GM ++ + + +RE
Sbjct: 72 NRRHCQACRLKRCVDIGMMKEFILTDEEVQRKRE 105
>AB002168-1|BAA83389.1| 427|Homo sapiens vitamin D receptor
protein.
Length = 427
Score = 62.1 bits (144), Expect = 2e-09
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKAC 578
C VCGD+++G H+ +TCEGCKGFFRRS + CP N C
Sbjct: 24 CGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDC 66
Score = 33.1 bits (72), Expect = 0.98
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 595 NRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQRE 696
NR CQ CRL++C+ +GM ++ + + +RE
Sbjct: 72 NRRHCQACRLKRCVDIGMMKEFILTDEEVQRKRE 105
>L13740-1|AAA36763.1| 598|Homo sapiens TR3 orphan receptor protein.
Length = 598
Score = 61.7 bits (143), Expect = 2e-09
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD +S HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 267 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPV 311
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQ+CR QKCL +GM ++ V+
Sbjct: 304 LANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVR 338
>D49728-1|BAA08565.1| 598|Homo sapiens DNA binding protein protein.
Length = 598
Score = 61.7 bits (143), Expect = 2e-09
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD +S HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 267 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPV 311
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQ+CR QKCL +GM ++ V+
Sbjct: 304 LANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVR 338
>CR456704-1|CAG32985.1| 598|Homo sapiens NR4A1 protein.
Length = 598
Score = 61.7 bits (143), Expect = 2e-09
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD +S HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 267 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPV 311
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQ+CR QKCL +GM ++ V+
Sbjct: 304 LANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVR 338
>BT007144-1|AAP35808.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 1 protein.
Length = 598
Score = 61.7 bits (143), Expect = 2e-09
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD +S HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 267 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPV 311
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQ+CR QKCL +GM ++ V+
Sbjct: 304 LANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVR 338
>BC016147-1|AAH16147.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 1 protein.
Length = 598
Score = 61.7 bits (143), Expect = 2e-09
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD +S HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 267 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPV 311
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQ+CR QKCL +GM ++ V+
Sbjct: 304 LANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVR 338
>AK131566-1|BAD18699.1| 652|Homo sapiens protein ( Homo sapiens
cDNA FLJ16818 fis, clone TRACH1000193, highly similar
to Orphan nuclear receptor HMR. ).
Length = 652
Score = 61.7 bits (143), Expect = 2e-09
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD +S HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 321 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPV 365
Score = 44.0 bits (99), Expect = 5e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQ+CR QKCL +GM ++ V+
Sbjct: 358 LANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVR 392
>L07592-1|AAA36469.1| 441|Homo sapiens peroxisome proliferator
activated receptor protein.
Length = 441
Score = 61.3 bits (142), Expect = 3e-09
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQ-CPRN 569
C+VCGDK+SG HYGV CEGCKGFFRR+ + Y+ C R+
Sbjct: 74 CRVCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERS 114
Score = 56.8 bits (131), Expect = 7e-08
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 571 RPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
R + NRN+CQYCR QKCL LGMS +A++FGRM + ++
Sbjct: 113 RSCKIQKKNRNKCQYCRFQKCLALGMSHNAIRFGRMPEAEK 153
>BC007578-1|AAH07578.1| 361|Homo sapiens PPARD protein protein.
Length = 361
Score = 61.3 bits (142), Expect = 3e-09
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQ-CPRN 569
C+VCGDK+SG HYGV CEGCKGFFRR+ + Y+ C R+
Sbjct: 74 CRVCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERS 114
Score = 56.8 bits (131), Expect = 7e-08
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 571 RPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
R + NRN+CQYCR QKCL LGMS +A++FGRM + ++
Sbjct: 113 RSCKIQKKNRNKCQYCRFQKCLALGMSHNAIRFGRMPEAEK 153
>BC002715-1|AAH02715.1| 361|Homo sapiens PPARD protein protein.
Length = 361
Score = 61.3 bits (142), Expect = 3e-09
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQ-CPRN 569
C+VCGDK+SG HYGV CEGCKGFFRR+ + Y+ C R+
Sbjct: 74 CRVCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERS 114
Score = 56.8 bits (131), Expect = 7e-08
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 571 RPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
R + NRN+CQYCR QKCL LGMS +A++FGRM + ++
Sbjct: 113 RSCKIQKKNRNKCQYCRFQKCLALGMSHNAIRFGRMPEAEK 153
>AY919140-1|AAX14041.1| 441|Homo sapiens peroxisome proliferator
activated receptor delta protein.
Length = 441
Score = 61.3 bits (142), Expect = 3e-09
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQ-CPRN 569
C+VCGDK+SG HYGV CEGCKGFFRR+ + Y+ C R+
Sbjct: 74 CRVCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERS 114
Score = 56.8 bits (131), Expect = 7e-08
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 571 RPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
R + NRN+CQYCR QKCL LGMS +A++FGRM + ++
Sbjct: 113 RSCKIQKKNRNKCQYCRFQKCLALGMSHNAIRFGRMPEAEK 153
>AY442342-1|AAR05439.1| 441|Homo sapiens peroxisome proliferative
activated receptor, delta protein.
Length = 441
Score = 61.3 bits (142), Expect = 3e-09
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQ-CPRN 569
C+VCGDK+SG HYGV CEGCKGFFRR+ + Y+ C R+
Sbjct: 74 CRVCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERS 114
Score = 56.8 bits (131), Expect = 7e-08
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 571 RPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
R + NRN+CQYCR QKCL LGMS +A++FGRM + ++
Sbjct: 113 RSCKIQKKNRNKCQYCRFQKCLALGMSHNAIRFGRMPEAEK 153
>AL022721-9|CAD92505.1| 361|Homo sapiens peroxisome proliferative
activated receptor, delta protein.
Length = 361
Score = 61.3 bits (142), Expect = 3e-09
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQ-CPRN 569
C+VCGDK+SG HYGV CEGCKGFFRR+ + Y+ C R+
Sbjct: 74 CRVCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERS 114
Score = 56.8 bits (131), Expect = 7e-08
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 571 RPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
R + NRN+CQYCR QKCL LGMS +A++FGRM + ++
Sbjct: 113 RSCKIQKKNRNKCQYCRFQKCLALGMSHNAIRFGRMPEAEK 153
>AL022721-8|CAB38629.1| 441|Homo sapiens peroxisome proliferative
activated receptor, delta protein.
Length = 441
Score = 61.3 bits (142), Expect = 3e-09
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQ-CPRN 569
C+VCGDK+SG HYGV CEGCKGFFRR+ + Y+ C R+
Sbjct: 74 CRVCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERS 114
Score = 56.8 bits (131), Expect = 7e-08
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 571 RPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
R + NRN+CQYCR QKCL LGMS +A++FGRM + ++
Sbjct: 113 RSCKIQKKNRNKCQYCRFQKCLALGMSHNAIRFGRMPEAEK 153
>AF246303-1|AAF62553.1| 441|Homo sapiens peroxisome proliferative
activated receptor delta protein.
Length = 441
Score = 61.3 bits (142), Expect = 3e-09
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQ-CPRN 569
C+VCGDK+SG HYGV CEGCKGFFRR+ + Y+ C R+
Sbjct: 74 CRVCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERS 114
Score = 56.8 bits (131), Expect = 7e-08
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 571 RPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
R + NRN+CQYCR QKCL LGMS +A++FGRM + ++
Sbjct: 113 RSCKIQKKNRNKCQYCRFQKCLALGMSHNAIRFGRMPEAEK 153
>AB099507-1|BAC78903.1| 161|Homo sapiens peroxisome proliferative
activated receptor-delta isoform protein.
Length = 161
Score = 61.3 bits (142), Expect = 3e-09
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQ-CPRN 569
C+VCGDK+SG HYGV CEGCKGFFRR+ + Y+ C R+
Sbjct: 74 CRVCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERS 114
Score = 56.8 bits (131), Expect = 7e-08
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 571 RPASWDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSKXQR 693
R + NRN+CQYCR QKCL LGMS +A++FGRM + ++
Sbjct: 113 RSCKIQKKNRNKCQYCRFQKCLALGMSHNAIRFGRMPEAEK 153
>Z49825-1|CAA89989.1| 504|Homo sapiens hepatocyte nuclear factor 4
alpha (HNF4alpha4) protein.
Length = 504
Score = 60.9 bits (141), Expect = 4e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG +C+GCKGFFRRS Y C ++ CVV
Sbjct: 90 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVV 134
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ RN+C+YCRL+KC + GM ++AV+
Sbjct: 135 DKDKRNQCRYCRLKKCFRAGMKKEAVQ 161
>Y00479-1|CAA68539.1| 490|Homo sapiens protein ( H.sapiens mRNA for
thyroid hormone receptor. ).
Length = 490
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRS--QSTVVNYQCPRNKACVV 584
C VCGDK++G HY ITCEGCKGFFRR+ ++ Y C + CV+
Sbjct: 53 CVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVI 99
Score = 36.7 bits (81), Expect = 0.080
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D++ RN+CQ CR +KC+ + M+ D V
Sbjct: 100 DKITRNQCQLCRFKKCIAVAMAMDLV 125
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD ++ HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 292 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPV 336
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQYCR QKCL +GM ++ V+
Sbjct: 329 LANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVR 363
>X87872-1|CAA61135.1| 408|Homo sapiens Hepatocyte nuclear factor 4C
protein.
Length = 408
Score = 60.9 bits (141), Expect = 4e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG +C+GCKGFFRRS Y C ++ CVV
Sbjct: 51 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVV 95
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ RN+C+YCRL+KC + GM ++AV+
Sbjct: 96 DKDKRNQCRYCRLKKCFRAGMKKEAVQ 122
>X87871-1|CAA61134.1| 465|Homo sapiens Hepatocyte nuclear factor 4B
protein.
Length = 465
Score = 60.9 bits (141), Expect = 4e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG +C+GCKGFFRRS Y C ++ CVV
Sbjct: 51 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVV 95
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ RN+C+YCRL+KC + GM ++AV+
Sbjct: 96 DKDKRNQCRYCRLKKCFRAGMKKEAVQ 122
>X87870-1|CAA61133.1| 455|Homo sapiens Hepatocyte nuclear factor 4A
protein.
Length = 455
Score = 60.9 bits (141), Expect = 4e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG +C+GCKGFFRRS Y C ++ CVV
Sbjct: 51 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVV 95
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ RN+C+YCRL+KC + GM ++AV+
Sbjct: 96 DKDKRNQCRYCRLKKCFRAGMKKEAVQ 122
>X76930-1|CAA54248.1| 465|Homo sapiens hepatocyte nuclear factor 4
protein.
Length = 465
Score = 60.9 bits (141), Expect = 4e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG +C+GCKGFFRRS Y C ++ CVV
Sbjct: 51 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVV 95
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ RN+C+YCRL+KC + GM ++AV+
Sbjct: 96 DKDKRNQCRYCRLKKCFRAGMKKEAVQ 122
>X75918-1|CAA53518.1| 598|Homo sapiens NOT protein.
Length = 598
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD ++ HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 263 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPV 307
Score = 45.2 bits (102), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQYCR QKCL +GM ++ V+
Sbjct: 300 LANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVR 334
>X55074-2|CAB57886.1| 490|Homo sapiens thyroid hormone receptor
alpha 2 protein.
Length = 490
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRS--QSTVVNYQCPRNKACVV 584
C VCGDK++G HY ITCEGCKGFFRR+ ++ Y C + CV+
Sbjct: 53 CVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVI 99
Score = 39.1 bits (87), Expect = 0.015
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D++ RN+CQ CR +KC+ +GM+ D V
Sbjct: 100 DKITRNQCQLCRFKKCIAVGMAMDLV 125
>X55074-1|CAA38899.1| 410|Homo sapiens thyroid hormone receptor
alpha 1 protein.
Length = 410
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRS--QSTVVNYQCPRNKACVV 584
C VCGDK++G HY ITCEGCKGFFRR+ ++ Y C + CV+
Sbjct: 53 CVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVI 99
Score = 39.1 bits (87), Expect = 0.015
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D++ RN+CQ CR +KC+ +GM+ D V
Sbjct: 100 DKITRNQCQLCRFKKCIAVGMAMDLV 125
>X55005-1|CAA38749.1| 410|Homo sapiens thyriod hormone receptor
alpha 1, THRA1 protein.
Length = 410
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRS--QSTVVNYQCPRNKACVV 584
C VCGDK++G HY ITCEGCKGFFRR+ ++ Y C + CV+
Sbjct: 53 CVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVI 99
Score = 39.1 bits (87), Expect = 0.015
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D++ RN+CQ CR +KC+ +GM+ D V
Sbjct: 100 DKITRNQCQLCRFKKCIAVGMAMDLV 125
>X51416-1|CAA35778.1| 521|Homo sapiens protein ( Human mRNA for
steroid hormone receptor hERR1. ).
Length = 521
Score = 60.9 bits (141), Expect = 4e-09
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD +SG HYGV +CE CK FF+R+ + Y CP + C +
Sbjct: 176 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEI 220
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 598 RNRCQYCRLQKCLKLGMSRDAVKFGRM 678
R CQ CR KCL++GM ++ V+ R+
Sbjct: 225 RKACQACRFTKCLRVGMLKEGVRLDRV 251
>U72969-1|AAB48082.1| 516|Homo sapiens hepatocyte nuclear factor
4-alpha protein.
Length = 516
Score = 60.9 bits (141), Expect = 4e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG +C+GCKGFFRRS Y C ++ CVV
Sbjct: 102 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVV 146
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ RN+C+YCRL+KC + GM ++AV+
Sbjct: 147 DKDKRNQCRYCRLKKCFRAGMKKEAVQ 173
>U72967-1|AAB48083.1| 408|Homo sapiens hepatocyte nuclear factor
4-alpha protein.
Length = 408
Score = 60.9 bits (141), Expect = 4e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG +C+GCKGFFRRS Y C ++ CVV
Sbjct: 51 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVV 95
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ RN+C+YCRL+KC + GM ++AV+
Sbjct: 96 DKDKRNQCRYCRLKKCFRAGMKKEAVQ 122
>U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear
orphan receptor protein.
Length = 587
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD ++ HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 253 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPV 297
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQYCR QKCL +GM ++ V+
Sbjct: 290 LANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVR 324
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD ++ HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 350 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPV 394
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQYCR QKCL +GM ++ V+
Sbjct: 387 LANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVR 421
>S77154-1|AAB33999.1| 535|Homo sapiens TINUR protein.
Length = 535
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD ++ HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 200 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPV 244
Score = 45.2 bits (102), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQYCR QKCL +GM ++ V+
Sbjct: 237 LANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVR 271
>M24899-1|AAA35783.1| 490|Homo sapiens triiodothyronine receptor
protein.
Length = 490
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRS--QSTVVNYQCPRNKACVV 584
C VCGDK++G HY ITCEGCKGFFRR+ ++ Y C + CV+
Sbjct: 53 CVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVI 99
Score = 39.1 bits (87), Expect = 0.015
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D++ RN+CQ CR +KC+ +GM+ D V
Sbjct: 100 DKITRNQCQLCRFKKCIAVGMAMDLV 125
>M24748-2|AAA66021.1| 410|Homo sapiens thyroid receptor alpha-1
protein.
Length = 410
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRS--QSTVVNYQCPRNKACVV 584
C VCGDK++G HY ITCEGCKGFFRR+ ++ Y C + CV+
Sbjct: 53 CVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVI 99
Score = 39.1 bits (87), Expect = 0.015
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D++ RN+CQ CR +KC+ +GM+ D V
Sbjct: 100 DKITRNQCQLCRFKKCIAVGMAMDLV 125
>L38487-1|AAB17015.1| 481|Homo sapiens estrogen receptor-related
protein protein.
Length = 481
Score = 60.9 bits (141), Expect = 4e-09
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD +SG HYGV +CE CK FF+R+ + Y CP + C +
Sbjct: 138 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEI 182
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 598 RNRCQYCRLQKCLKLGMSRDAVKFGRM 678
R CQ CR KCL++GM ++ V+ R+
Sbjct: 187 RKACQACRFTKCLRVGMLKEGVRLDRV 213
>J03239-1|AAA61176.1| 490|Homo sapiens thyroid hormone receptor
protein.
Length = 490
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRS--QSTVVNYQCPRNKACVV 584
C VCGDK++G HY ITCEGCKGFFRR+ ++ Y C + CV+
Sbjct: 53 CVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVI 99
Score = 39.1 bits (87), Expect = 0.015
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D++ RN+CQ CR +KC+ +GM+ D V
Sbjct: 100 DKITRNQCQLCRFKKCIAVGMAMDLV 125
>EF591040-1|ABQ52204.1| 474|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 474
Score = 60.9 bits (141), Expect = 4e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG +C+GCKGFFRRS Y C ++ CVV
Sbjct: 60 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVV 104
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ RN+C+YCRL+KC + GM ++AV+
Sbjct: 105 DKDKRNQCRYCRLKKCFRAGMKKEAVQ 131
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD ++ HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 292 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPV 336
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQYCR QKCL +GM ++ V+
Sbjct: 329 LANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVR 363
>DQ514553-1|ABF47104.1| 423|Homo sapiens estrogen-related receptor
alpha protein.
Length = 423
Score = 60.9 bits (141), Expect = 4e-09
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD +SG HYGV +CE CK FF+R+ + Y CP + C +
Sbjct: 79 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEI 123
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 598 RNRCQYCRLQKCLKLGMSRDAVKFGRM 678
R CQ CR KCL++GM ++ V+ R+
Sbjct: 128 RKACQACRFTKCLRVGMLKEGVRLDRV 154
>CR541915-1|CAG46713.1| 410|Homo sapiens THRA protein.
Length = 410
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRS--QSTVVNYQCPRNKACVV 584
C VCGDK++G HY ITCEGCKGFFRR+ ++ Y C + CV+
Sbjct: 53 CVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVI 99
Score = 39.1 bits (87), Expect = 0.015
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D++ RN+CQ CR +KC+ +GM+ D V
Sbjct: 100 DKITRNQCQLCRFKKCIAVGMAMDLV 125
>BC093722-1|AAH93722.1| 423|Homo sapiens estrogen-related receptor
alpha protein.
Length = 423
Score = 60.9 bits (141), Expect = 4e-09
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD +SG HYGV +CE CK FF+R+ + Y CP + C +
Sbjct: 79 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEI 123
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 598 RNRCQYCRLQKCLKLGMSRDAVKFGRM 678
R CQ CR KCL++GM ++ V+ R+
Sbjct: 128 RKACQACRFTKCLRVGMLKEGVRLDRV 154
>BC093720-1|AAH93720.1| 423|Homo sapiens estrogen-related receptor
alpha protein.
Length = 423
Score = 60.9 bits (141), Expect = 4e-09
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD +SG HYGV +CE CK FF+R+ + Y CP + C +
Sbjct: 79 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEI 123
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 598 RNRCQYCRLQKCLKLGMSRDAVKFGRM 678
R CQ CR KCL++GM ++ V+ R+
Sbjct: 128 RKACQACRFTKCLRVGMLKEGVRLDRV 154
>BC092470-1|AAH92470.1| 423|Homo sapiens ESRRA protein protein.
Length = 423
Score = 60.9 bits (141), Expect = 4e-09
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD +SG HYGV +CE CK FF+R+ + Y CP + C +
Sbjct: 79 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEI 123
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 598 RNRCQYCRLQKCLKLGMSRDAVKFGRM 678
R CQ CR KCL++GM ++ V+ R+
Sbjct: 128 RKACQACRFTKCLRVGMLKEGVRLDRV 154
>BC066890-1|AAH66890.1| 535|Homo sapiens nuclear receptor subfamily
4, group A, member 2 protein.
Length = 535
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD ++ HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 200 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPV 244
Score = 45.2 bits (102), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQYCR QKCL +GM ++ V+
Sbjct: 237 LANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVR 271
>BC063795-1|AAH63795.2| 423|Homo sapiens estrogen-related receptor
alpha protein.
Length = 423
Score = 60.9 bits (141), Expect = 4e-09
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD +SG HYGV +CE CK FF+R+ + Y CP + C +
Sbjct: 79 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEI 123
Score = 33.9 bits (74), Expect = 0.56
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 598 RNRCQYCRLQKCLKLGMSRDAVKFGRM 678
R CQ CR KCL++GM ++ V+ R+
Sbjct: 128 RKACQACRFTKCLRVGMLKEGVRLDRV 154
>BC035137-1|AAH35137.1| 451|Homo sapiens THRA protein protein.
Length = 451
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRS--QSTVVNYQCPRNKACVV 584
C VCGDK++G HY ITCEGCKGFFRR+ ++ Y C + CV+
Sbjct: 53 CVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVI 99
Score = 39.1 bits (87), Expect = 0.015
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D++ RN+CQ CR +KC+ +GM+ D V
Sbjct: 100 DKITRNQCQLCRFKKCIAVGMAMDLV 125
>BC009288-1|AAH09288.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 2 protein.
Length = 598
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD ++ HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 263 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPV 307
Score = 45.2 bits (102), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQYCR QKCL +GM ++ V+
Sbjct: 300 LANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVR 334
>BC008851-1|AAH08851.1| 410|Homo sapiens THRA protein protein.
Length = 410
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRS--QSTVVNYQCPRNKACVV 584
C VCGDK++G HY ITCEGCKGFFRR+ ++ Y C + CV+
Sbjct: 53 CVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVI 99
Score = 39.1 bits (87), Expect = 0.015
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D++ RN+CQ CR +KC+ +GM+ D V
Sbjct: 100 DKITRNQCQLCRFKKCIAVGMAMDLV 125
>BC002728-1|AAH02728.1| 490|Homo sapiens thyroid hormone receptor,
alpha (erythroblastic leukemia viral (v-erb-a) oncoge
protein.
Length = 490
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRS--QSTVVNYQCPRNKACVV 584
C VCGDK++G HY ITCEGCKGFFRR+ ++ Y C + CV+
Sbjct: 53 CVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVI 99
Score = 39.1 bits (87), Expect = 0.015
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D++ RN+CQ CR +KC+ +GM+ D V
Sbjct: 100 DKITRNQCQLCRFKKCIAVGMAMDLV 125
>BC000261-1|AAH00261.1| 490|Homo sapiens thyroid hormone receptor,
alpha (erythroblastic leukemia viral (v-erb-a) oncoge
protein.
Length = 490
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRS--QSTVVNYQCPRNKACVV 584
C VCGDK++G HY ITCEGCKGFFRR+ ++ Y C + CV+
Sbjct: 53 CVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVI 99
Score = 39.1 bits (87), Expect = 0.015
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAV 663
D++ RN+CQ CR +KC+ +GM+ D V
Sbjct: 100 DKITRNQCQLCRFKKCIAVGMAMDLV 125
>AY680698-1|AAT91239.1| 395|Homo sapiens hepatocyte nuclear factor
4 alpha, transcript variant 9 protein.
Length = 395
Score = 60.9 bits (141), Expect = 4e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG +C+GCKGFFRRS Y C ++ CVV
Sbjct: 38 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVV 82
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ RN+C+YCRL+KC + GM ++AV+
Sbjct: 83 DKDKRNQCRYCRLKKCFRAGMKKEAVQ 109
>AY680697-1|AAT91238.1| 452|Homo sapiens hepatocyte nuclear factor
4 alpha, transcript variant 8 protein.
Length = 452
Score = 60.9 bits (141), Expect = 4e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG +C+GCKGFFRRS Y C ++ CVV
Sbjct: 38 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVV 82
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ RN+C+YCRL+KC + GM ++AV+
Sbjct: 83 DKDKRNQCRYCRLKKCFRAGMKKEAVQ 109
>AY680696-1|AAT91237.1| 442|Homo sapiens hepatocyte nuclear factor
4 alpha, transcript variant 7 protein.
Length = 442
Score = 60.9 bits (141), Expect = 4e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG +C+GCKGFFRRS Y C ++ CVV
Sbjct: 38 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVV 82
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ RN+C+YCRL+KC + GM ++AV+
Sbjct: 83 DKDKRNQCRYCRLKKCFRAGMKKEAVQ 109
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD ++ HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 292 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPV 336
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQYCR QKCL +GM ++ V+
Sbjct: 329 LANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVR 363
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD ++ HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 292 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPV 336
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQYCR QKCL +GM ++ V+
Sbjct: 329 LANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVR 363
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD ++ HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 303 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPV 347
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQYCR QKCL +GM ++ V+
Sbjct: 340 LANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVR 374
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD ++ HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 292 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPV 336
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQYCR QKCL +GM ++ V+
Sbjct: 329 LANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVR 363
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C VCGD ++ HYGV TCEGCKGFF+R+ Y C NK C V
Sbjct: 303 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPV 347
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 562 LATRPASWDRVNRNRCQYCRLQKCLKLGMSRDAVK 666
LA + D+ RNRCQYCR QKCL +GM ++ V+
Sbjct: 340 LANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVR 374
>AL132772-10|CAI18863.1| 100|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 100
Score = 60.9 bits (141), Expect = 4e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG +C+GCKGFFRRS Y C ++ CVV
Sbjct: 38 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVV 82
Score = 31.9 bits (69), Expect = 2.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLK 639
D+ RN+C+YCRL+KC +
Sbjct: 83 DKDKRNQCRYCRLKKCFR 100
>AL132772-3|CAI18857.1| 467|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 467
Score = 60.9 bits (141), Expect = 4e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG +C+GCKGFFRRS Y C ++ CVV
Sbjct: 53 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVV 97
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ RN+C+YCRL+KC + GM ++AV+
Sbjct: 98 DKDKRNQCRYCRLKKCFRAGMKKEAVQ 124
>AL132772-2|CAC01303.1| 474|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 474
Score = 60.9 bits (141), Expect = 4e-09
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 450 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVV 584
C +CGD+++G HYG +C+GCKGFFRRS Y C ++ CVV
Sbjct: 60 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVV 104
Score = 41.1 bits (92), Expect = 0.004
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 586 DRVNRNRCQYCRLQKCLKLGMSRDAVK 666
D+ RN+C+YCRL+KC + GM ++AV+
Sbjct: 105 DKDKRNQCRYCRLKKCFRAGMKKEAVQ 131
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,143,352
Number of Sequences: 237096
Number of extensions: 2302486
Number of successful extensions: 6038
Number of sequences better than 10.0: 436
Number of HSP's better than 10.0 without gapping: 5285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6038
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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