Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0772
         (700 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g39230.1 68417.m05553 isoflavone reductase, putative similar ...    29   2.2  
At4g37030.1 68417.m05245 hypothetical protein                          27   9.0  
At1g14520.1 68414.m01721 oxygenase-related similar to myo-inosit...    27   9.0  

>At4g39230.1 68417.m05553 isoflavone reductase, putative similar to
           allergenic isoflavone reductase-like protein Bet v
           6.0102 [Betula pendula][GI:10764491]; contains Pfam
           profile PF02716: Isoflavone reductase
          Length = 308

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +3

Query: 468 KSSGVHYGVITCEGCKGFFRRSQSTVVNYQCPRNKACVVGQGQPQ 602
           ++ G+ Y  ++C    G+F  + +       PR+K  V+G G P+
Sbjct: 141 EAEGIPYTYVSCNFFAGYFLPTLAQPGATSAPRDKVIVLGDGNPK 185


>At4g37030.1 68417.m05245 hypothetical protein
          Length = 519

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 148 WLLFIVRNSIV*VSKETFLGYFRPVVVFRESNSHRGYALV 29
           W + ++   +V +    F+G +  VVVF+E +  RG + V
Sbjct: 246 WPIVVIGFILVTIFSSIFVGLYGAVVVFQERSFRRGVSYV 285


>At1g14520.1 68414.m01721 oxygenase-related similar to myo-inositol
           oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
          Length = 311

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -1

Query: 442 ISIWALIELA-AFLSMNMPDIDEPKMPSLL 356
           +SIW   EL   F+  + PD+DEP++  LL
Sbjct: 95  MSIWECCELLNEFIDESDPDLDEPQIEHLL 124


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,316,397
Number of Sequences: 28952
Number of extensions: 327249
Number of successful extensions: 909
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)